Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_008835 21 229 NP_001075109 21 229 NP_997639 18 1482 NP_002017 18 1482 NP_997643 18 1482 NP_997647 18 1482 NP_997641 18 1482 XP_005246474 18 1482 XP_005246473 18 1482 XP_005246472 18 1482 XP_005246471 18 1482 XP_005246470 18 1482 XP_005246469 18 1482 XP_005246468 18 1482 XP_005246467 18 1482 XP_005246466 18 1482 XP_005246465 18 1482 XP_005246464 18 1482 XP_005246463 18 1482 XP_005246462 18 1482 XP_005246461 18 1482 XP_005246460 18 1482 XP_005246459 18 1482 XP_005246458 18 1482 XP_005246457 18 1482 XP_005246456 18 1482 XP_005246455 18 1482 XP_005246454 18 1482 NP_055906 17 2528 XP_006720146 17 2528 XP_005267508 17 2528 NP_006764 16 7355 NP_065801 15 9605 NP_006604 15 9605 NP_872332 15 9605 XP_006720125 15 9605 XP_005267432 15 9605 XP_005267431 15 9605 XP_005267430 15 9605>NP_008835 Length = 4128 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 EVSQFDFST 9 E+SQFDFST Sbjct: 2039 EMSQFDFST 2047>NP_001075109 Length = 4097 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 EVSQFDFST 9 E+SQFDFST Sbjct: 2039 EMSQFDFST 2047>NP_997639 Length = 2176 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 EVSQFDFST 9 EV++FDF+T Sbjct: 691 EVTRFDFTT 699>NP_002017 Length = 2355 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 EVSQFDFST 9 EV++FDF+T Sbjct: 691 EVTRFDFTT 699>NP_997643 Length = 2330 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 EVSQFDFST 9 EV++FDF+T Sbjct: 691 EVTRFDFTT 699>NP_997647 Length = 2477 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 EVSQFDFST 9 EV++FDF+T Sbjct: 691 EVTRFDFTT 699>NP_997641 Length = 2296 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 EVSQFDFST 9 EV++FDF+T Sbjct: 691 EVTRFDFTT 699>XP_005246474 Length = 2240 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 EVSQFDFST 9 EV++FDF+T Sbjct: 691 EVTRFDFTT 699>XP_005246473 Length = 2246 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 EVSQFDFST 9 EV++FDF+T Sbjct: 691 EVTRFDFTT 699>XP_005246472 Length = 2265 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 EVSQFDFST 9 EV++FDF+T Sbjct: 691 EVTRFDFTT 699>XP_005246471 Length = 2266 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 EVSQFDFST 9 EV++FDF+T Sbjct: 691 EVTRFDFTT 699>XP_005246470 Length = 2267 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 EVSQFDFST 9 EV++FDF+T Sbjct: 691 EVTRFDFTT 699>XP_005246469 Length = 2271 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 EVSQFDFST 9 EV++FDF+T Sbjct: 691 EVTRFDFTT 699>XP_005246468 Length = 2273 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 EVSQFDFST 9 EV++FDF+T Sbjct: 691 EVTRFDFTT 699>XP_005246467 Length = 2337 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 EVSQFDFST 9 EV++FDF+T Sbjct: 691 EVTRFDFTT 699>XP_005246466 Length = 2361 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 EVSQFDFST 9 EV++FDF+T Sbjct: 691 EVTRFDFTT 699>XP_005246465 Length = 2362 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 EVSQFDFST 9 EV++FDF+T Sbjct: 691 EVTRFDFTT 699>XP_005246464 Length = 2363 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 EVSQFDFST 9 EV++FDF+T Sbjct: 691 EVTRFDFTT 699>XP_005246463 Length = 2386 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 EVSQFDFST 9 EV++FDF+T Sbjct: 691 EVTRFDFTT 699>XP_005246462 Length = 2387 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 EVSQFDFST 9 EV++FDF+T Sbjct: 691 EVTRFDFTT 699>XP_005246461 Length = 2392 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 EVSQFDFST 9 EV++FDF+T Sbjct: 691 EVTRFDFTT 699>XP_005246460 Length = 2393 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 EVSQFDFST 9 EV++FDF+T Sbjct: 691 EVTRFDFTT 699>XP_005246459 Length = 2421 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 EVSQFDFST 9 EV++FDF+T Sbjct: 691 EVTRFDFTT 699>XP_005246458 Length = 2427 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 EVSQFDFST 9 EV++FDF+T Sbjct: 691 EVTRFDFTT 699>XP_005246457 Length = 2446 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 EVSQFDFST 9 EV++FDF+T Sbjct: 691 EVTRFDFTT 699>XP_005246456 Length = 2452 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 EVSQFDFST 9 EV++FDF+T Sbjct: 691 EVTRFDFTT 699>XP_005246455 Length = 2458 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 EVSQFDFST 9 EV++FDF+T Sbjct: 691 EVTRFDFTT 699>XP_005246454 Length = 2483 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 EVSQFDFST 9 EV++FDF+T Sbjct: 691 EVTRFDFTT 699>NP_055906 Length = 1720 Score = 17.3 bits (33), Expect = 2528 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 EVSQFDFST 9 ++S FDF+T Sbjct: 1087 QISSFDFTT 1095>XP_006720146 Length = 1226 Score = 17.3 bits (33), Expect = 2528 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 EVSQFDFST 9 ++S FDF+T Sbjct: 1087 QISSFDFTT 1095>XP_005267508 Length = 1773 Score = 17.3 bits (33), Expect = 2528 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 EVSQFDFST 9 ++S FDF+T Sbjct: 1087 QISSFDFTT 1095>NP_006764 Length = 670 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 VSQFDFS 8 +S+FDFS Sbjct: 548 LSEFDFS 554>NP_065801 Length = 1204 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 EVSQFDFST 9 E S+FDF + Sbjct: 420 EYSRFDFDS 428>NP_006604 Length = 217 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 SQFDFS 8 +QFDFS Sbjct: 165 AQFDFS 170>NP_872332 Length = 167 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 EVSQFDF 7 + SQFDF Sbjct: 104 DYSQFDF 110>XP_006720125 Length = 167 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 EVSQFDF 7 + SQFDF Sbjct: 104 DYSQFDF 110>XP_005267432 Length = 167 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 EVSQFDF 7 + SQFDF Sbjct: 104 DYSQFDF 110>XP_005267431 Length = 167 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 EVSQFDF 7 + SQFDF Sbjct: 104 DYSQFDF 110>XP_005267430 Length = 167 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 EVSQFDF 7 + SQFDF Sbjct: 104 DYSQFDF 110Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.316 0.126 0.331 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 420,834 Number of extensions: 497 Number of successful extensions: 39 Number of sequences better than 10000.0: 39 Number of HSP's gapped: 39 Number of HSP's successfully gapped: 39 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.8 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |