Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000312 20 299 NP_002072 18 1935 NP_006150 17 3301 NP_001138582 17 3301 NP_001138581 17 3301 NP_001138580 17 3301 NP_001138579 17 3301 XP_005268962 17 3301 NP_001273206 16 5631 NP_001273207 16 5631 NP_001273208 16 5631 NP_006313 16 5631 NP_076404 16 5631 XP_005268350 16 5631 NP_115495 16 7355 NP_079170 16 7355 NP_997191 16 7355 NP_001248323 16 7355 NP_001248321 16 7355 NP_001152956 16 7355 NP_835231 16 7355 NP_065810 16 7355 XP_006720684 16 7355 XP_006713679 16 7355 XP_006713678 16 7355 XP_005247487 16 7355 XP_005247486 16 7355 XP_006711682 16 7355 NP_001012985 15 9605 NP_001275582 15 9605 NP_004850 15 9605 NP_112219 15 9605 NP_004791 15 9605 NP_001129203 15 9605 NP_078921 15 9605 XP_006722979 15 9605 XP_005257069 15 9605 XP_006716463 15 9605 XP_006716462 15 9605 XP_005263404 15 9605 XP_005263403 15 9605 XP_006714474 15 9605 XP_006714473 15 9605 XP_006714472 15 9605 XP_005263402 15 9605 XP_005263401 15 9605 XP_005263399 15 9605 XP_005263400 15 9605 XP_006714471 15 9605 XP_005263398 15 9605>NP_000312 Length = 928 Score = 20.4 bits (41), Expect = 299 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 VRLYYRVM 9 VRLYYRVM Sbjct: 450 VRLYYRVM 457>NP_002072 Length = 558 Score = 17.7 bits (34), Expect = 1935 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 EVRLYYR 7 E+RLYYR Sbjct: 147 ELRLYYR 153>NP_006150 Length = 816 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 EVRLYYR 7 EVRL+YR Sbjct: 124 EVRLHYR 130>NP_001138582 Length = 839 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 EVRLYYR 7 EVRL+YR Sbjct: 147 EVRLHYR 153>NP_001138581 Length = 815 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 EVRLYYR 7 EVRL+YR Sbjct: 123 EVRLHYR 129>NP_001138580 Length = 816 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 EVRLYYR 7 EVRL+YR Sbjct: 124 EVRLHYR 130>NP_001138579 Length = 866 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 EVRLYYR 7 EVRL+YR Sbjct: 174 EVRLHYR 180>XP_005268962 Length = 816 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 EVRLYYR 7 EVRL+YR Sbjct: 124 EVRLHYR 130>NP_001273206 Length = 897 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 EVRLYYRVM 9 E+R YYR++ Sbjct: 321 ELREYYRLL 329>NP_001273207 Length = 824 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 EVRLYYRVM 9 E+R YYR++ Sbjct: 331 ELREYYRLL 339>NP_001273208 Length = 439 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 EVRLYYRVM 9 E+R YYR++ Sbjct: 331 ELREYYRLL 339>NP_006313 Length = 907 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 EVRLYYRVM 9 E+R YYR++ Sbjct: 331 ELREYYRLL 339>NP_076404 Length = 358 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 EVRLYY 6 EVR+YY Sbjct: 348 EVRIYY 353>XP_005268350 Length = 818 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 EVRLYYRVM 9 E+R YYR++ Sbjct: 331 ELREYYRLL 339>NP_115495 Length = 6306 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VRLYYRVM 9 VRL+Y+ M Sbjct: 4298 VRLWYKTM 4305>NP_079170 Length = 688 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 EVRLYYRV 8 ++RLY++V Sbjct: 405 DIRLYHKV 412>NP_997191 Length = 1888 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 EVRLYYRVM 9 EV++Y+ +M Sbjct: 458 EVKIYFPIM 466>NP_001248323 Length = 638 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 EVRLYYRV 8 ++RLY++V Sbjct: 355 DIRLYHKV 362>NP_001248321 Length = 662 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 EVRLYYRV 8 ++RLY++V Sbjct: 379 DIRLYHKV 386>NP_001152956 Length = 1736 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 EVRLYYRVM 9 EV++Y+ +M Sbjct: 458 EVKIYFPIM 466>NP_835231 Length = 263 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 EVRLYYR 7 EVRL+Y+ Sbjct: 140 EVRLFYQ 146>NP_065810 Length = 4700 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 VRLYYRV 8 V+LYY+V Sbjct: 4528 VQLYYKV 4534>XP_006720684 Length = 4713 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 VRLYYRV 8 V+LYY+V Sbjct: 4541 VQLYYKV 4547>XP_006713679 Length = 267 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 EVRLYYR 7 EVRL+Y+ Sbjct: 138 EVRLFYQ 144>XP_006713678 Length = 291 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 EVRLYYR 7 EVRL+Y+ Sbjct: 162 EVRLFYQ 168>XP_005247487 Length = 330 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 EVRLYYR 7 EVRL+Y+ Sbjct: 201 EVRLFYQ 207>XP_005247486 Length = 342 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 EVRLYYR 7 EVRL+Y+ Sbjct: 213 EVRLFYQ 219>XP_006711682 Length = 1739 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 EVRLYYRVM 9 EV++Y+ +M Sbjct: 309 EVKIYFPIM 317>NP_001012985 Length = 1706 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 VRLYYRVM 9 +R+Y+RV+ Sbjct: 272 LRMYHRVL 279>NP_001275582 Length = 1679 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 VRLYYRVM 9 V LYYR + Sbjct: 1405 VELYYRAI 1412>NP_004850 Length = 1675 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 VRLYYRVM 9 V LYYR + Sbjct: 1401 VELYYRAI 1408>NP_112219 Length = 1103 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 EVRLYYRV 8 E RL+Y+V Sbjct: 73 ESRLFYKV 80>NP_004791 Length = 663 Score = 15.4 bits (28), Expect = 9605 Identities = 3/9 (33%), Positives = 8/9 (88%) Query: 1 EVRLYYRVM 9 ++++YY V+ Sbjct: 213 DIKIYYHVV 221>NP_001129203 Length = 153 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 EVRLYY 6 +VRLYY Sbjct: 41 KVRLYY 46>NP_078921 Length = 229 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 EVRLYY 6 +VRLYY Sbjct: 41 KVRLYY 46>XP_006722979 Length = 1103 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 EVRLYYRV 8 E RL+Y+V Sbjct: 73 ESRLFYKV 80>XP_005257069 Length = 1682 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 VRLYYRVM 9 V LYYR + Sbjct: 1401 VELYYRAI 1408>XP_006716463 Length = 230 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 EVRLYY 6 +VRLYY Sbjct: 46 KVRLYY 51>XP_006716462 Length = 234 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 EVRLYY 6 +VRLYY Sbjct: 46 KVRLYY 51>XP_005263404 Length = 1308 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 VRLYYRVM 9 +R+Y+RV+ Sbjct: 272 LRMYHRVL 279>XP_005263403 Length = 1672 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 VRLYYRVM 9 +R+Y+RV+ Sbjct: 272 LRMYHRVL 279>XP_006714474 Length = 1674 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 VRLYYRVM 9 +R+Y+RV+ Sbjct: 272 LRMYHRVL 279>XP_006714473 Length = 1675 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 VRLYYRVM 9 +R+Y+RV+ Sbjct: 272 LRMYHRVL 279>XP_006714472 Length = 1706 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 VRLYYRVM 9 +R+Y+RV+ Sbjct: 272 LRMYHRVL 279>XP_005263402 Length = 1707 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 VRLYYRVM 9 +R+Y+RV+ Sbjct: 272 LRMYHRVL 279>XP_005263401 Length = 1707 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 VRLYYRVM 9 +R+Y+RV+ Sbjct: 272 LRMYHRVL 279>XP_005263399 Length = 1707 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 VRLYYRVM 9 +R+Y+RV+ Sbjct: 272 LRMYHRVL 279>XP_005263400 Length = 1707 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 VRLYYRVM 9 +R+Y+RV+ Sbjct: 272 LRMYHRVL 279>XP_006714471 Length = 1707 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 VRLYYRVM 9 +R+Y+RV+ Sbjct: 272 LRMYHRVL 279>XP_005263398 Length = 1707 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 VRLYYRVM 9 +R+Y+RV+ Sbjct: 272 LRMYHRVL 279Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.342 0.152 0.439 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 460,254 Number of extensions: 616 Number of successful extensions: 50 Number of sequences better than 10000.0: 50 Number of HSP's gapped: 50 Number of HSP's successfully gapped: 50 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.6 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |