Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001257436 18 1135 NP_001257437 18 1135 NP_006281 18 1135 XP_005267176 18 1135 NP_001153705 16 7355 NP_000692 16 7355 NP_001153706 16 7355 NP_001735 16 7355 XP_006710718 16 7355 NP_570848 15 9605 NP_570850 15 9605 NP_570849 15 9605 NP_570844 15 9605 NP_570845 15 9605 NP_570846 15 9605 NP_570847 15 9605 NP_056375 15 9605 NP_115646 15 9605 NP_003310 15 9605 NP_597676 15 9605 NP_001243779 15 9605 NP_596869 15 9605 NP_004749 15 9605 NP_077729 15 9605 NP_001248764 15 9605 XP_006722241 15 9605 XP_006722240 15 9605 XP_006722238 15 9605 XP_005257864 15 9605 XP_006722237 15 9605 XP_006722236 15 9605 XP_005246888 15 9605 XP_006712788 15 9605 XP_006712787 15 9605 XP_006712786 15 9605 XP_006711023 15 9605 NP_001254479 15 9605 NP_597681 15 9605>NP_001257436 Length = 790 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 EVRKLVVLK 9 EVRKLV LK Sbjct: 88 EVRKLVALK 96>NP_001257437 Length = 790 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 EVRKLVVLK 9 EVRKLV LK Sbjct: 88 EVRKLVALK 96>NP_006281 Length = 790 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 EVRKLVVLK 9 EVRKLV LK Sbjct: 88 EVRKLVALK 96>XP_005267176 Length = 790 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 EVRKLVVLK 9 EVRKLV LK Sbjct: 88 EVRKLVALK 96>NP_001153705 Length = 1023 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 EVRKLVV 7 EVRKL++ Sbjct: 1003 EVRKLII 1009>NP_000692 Length = 1023 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 EVRKLVV 7 EVRKL++ Sbjct: 1003 EVRKLII 1009>NP_001153706 Length = 992 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 EVRKLVV 7 EVRKL++ Sbjct: 972 EVRKLII 978>NP_001735 Length = 473 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 VRKLVVL 8 VRKL+VL Sbjct: 277 VRKLIVL 283>XP_006710718 Length = 992 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 EVRKLVV 7 EVRKL++ Sbjct: 972 EVRKLII 978>NP_570848 Length = 979 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 EVRKLVVLK 9 E+RKLV+ K Sbjct: 261 ELRKLVLQK 269>NP_570850 Length = 1015 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 EVRKLVVLK 9 E+RKLV+ K Sbjct: 297 ELRKLVLQK 305>NP_570849 Length = 997 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 EVRKLVVLK 9 E+RKLV+ K Sbjct: 279 ELRKLVLQK 287>NP_570844 Length = 924 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 EVRKLVVLK 9 E+RKLV+ K Sbjct: 206 ELRKLVLQK 214>NP_570845 Length = 942 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 EVRKLVVLK 9 E+RKLV+ K Sbjct: 224 ELRKLVLQK 232>NP_570846 Length = 961 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 EVRKLVVLK 9 E+RKLV+ K Sbjct: 243 ELRKLVLQK 251>NP_570847 Length = 978 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 EVRKLVVLK 9 E+RKLV+ K Sbjct: 260 ELRKLVLQK 268>NP_056375 Length = 960 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 EVRKLVVLK 9 E+RKLV+ K Sbjct: 242 ELRKLVLQK 250>NP_115646 Length = 803 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VRKLVVLK 9 +RKL VLK Sbjct: 636 LRKLTVLK 643>NP_003310 Length = 26926 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 EVRKLVVLK 9 ++RK+VVL+ Sbjct: 18615 DLRKVVVLR 18623>NP_597676 Length = 27051 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 EVRKLVVLK 9 ++RK+VVL+ Sbjct: 18740 DLRKVVVLR 18748>NP_001243779 Length = 34350 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 EVRKLVVLK 9 ++RK+VVL+ Sbjct: 26039 DLRKVVVLR 26047>NP_596869 Length = 33423 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 EVRKLVVLK 9 ++RK+VVL+ Sbjct: 25112 DLRKVVVLR 25120>NP_004749 Length = 1857 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 RKLVVLK 9 R+LVVLK Sbjct: 795 RRLVVLK 801>NP_077729 Length = 1797 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 RKLVVLK 9 R+LVVLK Sbjct: 735 RRLVVLK 741>NP_001248764 Length = 1848 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 RKLVVLK 9 R+LVVLK Sbjct: 795 RRLVVLK 801>XP_006722241 Length = 1467 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 RKLVVLK 9 R+LVVLK Sbjct: 355 RRLVVLK 361>XP_006722240 Length = 1467 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 RKLVVLK 9 R+LVVLK Sbjct: 355 RRLVVLK 361>XP_006722238 Length = 1847 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 RKLVVLK 9 R+LVVLK Sbjct: 735 RRLVVLK 741>XP_005257864 Length = 1898 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 RKLVVLK 9 R+LVVLK Sbjct: 795 RRLVVLK 801>XP_006722237 Length = 1900 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 RKLVVLK 9 R+LVVLK Sbjct: 788 RRLVVLK 794>XP_006722236 Length = 1907 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 RKLVVLK 9 R+LVVLK Sbjct: 795 RRLVVLK 801>XP_005246888 Length = 22663 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 EVRKLVVLK 9 ++RK+VVL+ Sbjct: 14352 DLRKVVVLR 14360>XP_006712788 Length = 24022 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 EVRKLVVLK 9 ++RK+VVL+ Sbjct: 15711 DLRKVVVLR 15719>XP_006712787 Length = 33978 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 EVRKLVVLK 9 ++RK+VVL+ Sbjct: 25667 DLRKVVVLR 25675>XP_006712786 Length = 35484 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 EVRKLVVLK 9 ++RK+VVL+ Sbjct: 27173 DLRKVVVLR 27181>XP_006711023 Length = 808 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VRKLVVLK 9 +RKL VLK Sbjct: 641 LRKLTVLK 648>NP_001254479 Length = 35991 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 EVRKLVVLK 9 ++RK+VVL+ Sbjct: 27680 DLRKVVVLR 27688>NP_597681 Length = 27118 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 EVRKLVVLK 9 ++RK+VVL+ Sbjct: 18807 DLRKVVVLR 18815Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.327 0.145 0.341 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 345,622 Number of extensions: 489 Number of successful extensions: 38 Number of sequences better than 10000.0: 38 Number of HSP's gapped: 38 Number of HSP's successfully gapped: 38 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.0 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |