Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005836 16 5631 NP_002027 16 5631 NP_001116423 16 5631 XP_005254082 16 5631 XP_006719977 16 5631 NP_006280 16 7355 NP_003310 16 7355 NP_597676 16 7355 NP_001243779 16 7355 NP_596869 16 7355 NP_689733 16 7355 NP_001106869 16 7355 NP_001106868 16 7355 NP_001269654 16 7355 XP_006716915 16 7355 XP_005251621 16 7355 XP_005246888 16 7355 XP_006712788 16 7355 XP_006712787 16 7355 XP_006712786 16 7355 XP_006712387 16 7355 XP_006712386 16 7355 XP_006712385 16 7355 XP_006712384 16 7355 NP_001254479 16 7355 NP_597681 16 7355 NP_060250 15 9605 NP_006174 15 9605 NP_644814 15 9605 XP_006721859 15 9605 XP_006716523 15 9605 XP_006716522 15 9605 XP_005251324 15 9605 XP_005251323 15 9605>NP_005836 Length = 1325 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 EVKALEATT 9 +VK LE+TT Sbjct: 888 DVKRLESTT 896>NP_002027 Length = 336 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 EVKALEAT 8 E+KAL+AT Sbjct: 202 ELKALQAT 209>NP_001116423 Length = 338 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 EVKALEAT 8 E+KAL+AT Sbjct: 204 ELKALQAT 211>XP_005254082 Length = 1282 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 EVKALEATT 9 +VK LE+TT Sbjct: 845 DVKRLESTT 853>XP_006719977 Length = 1295 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 EVKALEATT 9 +VK LE+TT Sbjct: 858 DVKRLESTT 866>NP_006280 Length = 2541 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 KALEATT 9 +ALEATT Sbjct: 2144 RALEATT 2150>NP_003310 Length = 26926 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 EVKALEAT 8 +VK LEAT Sbjct: 18850 QVKTLEAT 18857>NP_597676 Length = 27051 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 EVKALEAT 8 +VK LEAT Sbjct: 18975 QVKTLEAT 18982>NP_001243779 Length = 34350 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 EVKALEAT 8 +VK LEAT Sbjct: 26274 QVKTLEAT 26281>NP_596869 Length = 33423 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 EVKALEAT 8 +VK LEAT Sbjct: 25347 QVKTLEAT 25354>NP_689733 Length = 471 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 EVKALEAT 8 +VKAL+AT Sbjct: 184 KVKALDAT 191>NP_001106869 Length = 369 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 EVKALEAT 8 +VKAL+AT Sbjct: 82 KVKALDAT 89>NP_001106868 Length = 395 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 EVKALEAT 8 +VKAL+AT Sbjct: 108 KVKALDAT 115>NP_001269654 Length = 369 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 EVKALEAT 8 +VKAL+AT Sbjct: 82 KVKALDAT 89>XP_006716915 Length = 2542 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 KALEATT 9 +ALEATT Sbjct: 2144 RALEATT 2150>XP_005251621 Length = 2542 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 KALEATT 9 +ALEATT Sbjct: 2144 RALEATT 2150>XP_005246888 Length = 22663 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 EVKALEAT 8 +VK LEAT Sbjct: 14587 QVKTLEAT 14594>XP_006712788 Length = 24022 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 EVKALEAT 8 +VK LEAT Sbjct: 15946 QVKTLEAT 15953>XP_006712787 Length = 33978 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 EVKALEAT 8 +VK LEAT Sbjct: 25902 QVKTLEAT 25909>XP_006712786 Length = 35484 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 EVKALEAT 8 +VK LEAT Sbjct: 27408 QVKTLEAT 27415>XP_006712387 Length = 382 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 EVKALEAT 8 +VKAL+AT Sbjct: 95 KVKALDAT 102>XP_006712386 Length = 382 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 EVKALEAT 8 +VKAL+AT Sbjct: 95 KVKALDAT 102>XP_006712385 Length = 382 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 EVKALEAT 8 +VKAL+AT Sbjct: 95 KVKALDAT 102>XP_006712384 Length = 382 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 EVKALEAT 8 +VKAL+AT Sbjct: 95 KVKALDAT 102>NP_001254479 Length = 35991 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 EVKALEAT 8 +VK LEAT Sbjct: 27915 QVKTLEAT 27922>NP_597681 Length = 27118 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 EVKALEAT 8 +VK LEAT Sbjct: 19042 QVKTLEAT 19049>NP_060250 Length = 2997 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 EVKALEA 7 EV+ALEA Sbjct: 1947 EVRALEA 1953>NP_006174 Length = 170 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 EVKALEA 7 E+KALEA Sbjct: 29 EMKALEA 35>NP_644814 Length = 880 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 VKALEATT 9 ++A+EATT Sbjct: 440 LRAIEATT 447>XP_006721859 Length = 844 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 VKALEATT 9 ++A+EATT Sbjct: 404 LRAIEATT 411>XP_006716523 Length = 1912 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 EVKALEA 7 EV+ALEA Sbjct: 862 EVRALEA 868>XP_006716522 Length = 2192 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 EVKALEA 7 EV+ALEA Sbjct: 1142 EVRALEA 1148>XP_005251324 Length = 2996 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 EVKALEA 7 EV+ALEA Sbjct: 1947 EVRALEA 1953>XP_005251323 Length = 2997 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 EVKALEA 7 EV+ALEA Sbjct: 1947 EVRALEA 1953Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.293 0.106 0.236 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 261,498 Number of extensions: 236 Number of successful extensions: 34 Number of sequences better than 10000.0: 34 Number of HSP's gapped: 34 Number of HSP's successfully gapped: 34 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.1 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |