Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001138389 18 1135 NP_001138390 18 1135 NP_001138386 18 1135 NP_001138387 18 1135 NP_000132 18 1135 NP_075259 18 1135 NP_001138388 18 1135 NP_001138391 18 1135 NP_001138385 18 1135 NP_075418 18 1135 XP_006717776 18 1135 XP_006717775 18 1135 XP_006717774 18 1135 XP_006717773 18 1135 XP_006717772 18 1135 XP_006717771 18 1135 NP_001156685 17 4312 NP_000133 17 4312 NP_075254 17 4312 XP_006713936 17 4312 XP_006713935 17 4312 XP_006713934 17 4312 XP_006713933 17 4312 XP_006713932 17 4312 XP_006713931 17 4312 NP_055798 16 7355 XP_006714830 16 7355 XP_006714829 16 7355 XP_006714828 16 7355 NP_000213 15 9605 NP_001087241 15 9605 NP_001161846 15 9605 NP_001161849 15 9605 NP_001161848 15 9605 NP_001239257 15 9605 NP_055624 15 9605 NP_001161847 15 9605 XP_006715351 15 9605 XP_006715350 15 9605 XP_006715349 15 9605 XP_005249561 15 9605 XP_005265799 15 9605 XP_005265798 15 9605 XP_005265797 15 9605>NP_001138389 Length = 705 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ETVTVAVKM 9 E VTVAVKM Sbjct: 394 EAVTVAVKM 402>NP_001138390 Length = 704 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ETVTVAVKM 9 E VTVAVKM Sbjct: 393 EAVTVAVKM 401>NP_001138386 Length = 709 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ETVTVAVKM 9 E VTVAVKM Sbjct: 398 EAVTVAVKM 406>NP_001138387 Length = 707 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ETVTVAVKM 9 E VTVAVKM Sbjct: 421 EAVTVAVKM 429>NP_000132 Length = 821 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ETVTVAVKM 9 E VTVAVKM Sbjct: 510 EAVTVAVKM 518>NP_075259 Length = 822 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ETVTVAVKM 9 E VTVAVKM Sbjct: 511 EAVTVAVKM 519>NP_001138388 Length = 706 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ETVTVAVKM 9 E VTVAVKM Sbjct: 395 EAVTVAVKM 403>NP_001138391 Length = 680 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ETVTVAVKM 9 E VTVAVKM Sbjct: 422 EAVTVAVKM 430>NP_001138385 Length = 769 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ETVTVAVKM 9 E VTVAVKM Sbjct: 511 EAVTVAVKM 519>NP_075418 Length = 732 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ETVTVAVKM 9 E VTVAVKM Sbjct: 421 EAVTVAVKM 429>XP_006717776 Length = 806 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ETVTVAVKM 9 E VTVAVKM Sbjct: 529 EAVTVAVKM 537>XP_006717775 Length = 726 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ETVTVAVKM 9 E VTVAVKM Sbjct: 415 EAVTVAVKM 423>XP_006717774 Length = 752 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ETVTVAVKM 9 E VTVAVKM Sbjct: 441 EAVTVAVKM 449>XP_006717773 Length = 807 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ETVTVAVKM 9 E VTVAVKM Sbjct: 530 EAVTVAVKM 538>XP_006717772 Length = 838 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ETVTVAVKM 9 E VTVAVKM Sbjct: 527 EAVTVAVKM 535>XP_006717771 Length = 839 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ETVTVAVKM 9 E VTVAVKM Sbjct: 528 EAVTVAVKM 536>NP_001156685 Length = 808 Score = 16.5 bits (31), Expect = 4312 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 VTVAVKM 9 VTVAVKM Sbjct: 505 VTVAVKM 511>NP_000133 Length = 806 Score = 16.5 bits (31), Expect = 4312 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 VTVAVKM 9 VTVAVKM Sbjct: 503 VTVAVKM 509>NP_075254 Length = 694 Score = 16.5 bits (31), Expect = 4312 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 VTVAVKM 9 VTVAVKM Sbjct: 391 VTVAVKM 397>XP_006713936 Length = 807 Score = 16.5 bits (31), Expect = 4312 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 VTVAVKM 9 VTVAVKM Sbjct: 503 VTVAVKM 509>XP_006713935 Length = 807 Score = 16.5 bits (31), Expect = 4312 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 VTVAVKM 9 VTVAVKM Sbjct: 504 VTVAVKM 510>XP_006713934 Length = 809 Score = 16.5 bits (31), Expect = 4312 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 VTVAVKM 9 VTVAVKM Sbjct: 505 VTVAVKM 511>XP_006713933 Length = 810 Score = 16.5 bits (31), Expect = 4312 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 VTVAVKM 9 VTVAVKM Sbjct: 506 VTVAVKM 512>XP_006713932 Length = 810 Score = 16.5 bits (31), Expect = 4312 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 VTVAVKM 9 VTVAVKM Sbjct: 507 VTVAVKM 513>XP_006713931 Length = 811 Score = 16.5 bits (31), Expect = 4312 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 VTVAVKM 9 VTVAVKM Sbjct: 507 VTVAVKM 513>NP_055798 Length = 1292 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ETVTVAVKM 9 +TVT VKM Sbjct: 779 QTVTAQVKM 787>XP_006714830 Length = 1007 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ETVTVAVKM 9 +TVT VKM Sbjct: 494 QTVTAQVKM 502>XP_006714829 Length = 1093 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ETVTVAVKM 9 +TVT VKM Sbjct: 580 QTVTAQVKM 588>XP_006714828 Length = 1126 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ETVTVAVKM 9 +TVT VKM Sbjct: 613 QTVTAQVKM 621>NP_000213 Length = 976 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 VTVAVKM 9 +TVAVKM Sbjct: 618 MTVAVKM 624>NP_001087241 Length = 972 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 VTVAVKM 9 +TVAVKM Sbjct: 614 MTVAVKM 620>NP_001161846 Length = 1063 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 TVTVAVK 8 T+TVAVK Sbjct: 697 TLTVAVK 703>NP_001161849 Length = 1011 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 TVTVAVK 8 T+TVAVK Sbjct: 706 TLTVAVK 712>NP_001161848 Length = 1027 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 TVTVAVK 8 T+TVAVK Sbjct: 661 TLTVAVK 667>NP_001239257 Length = 483 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 TVTVAVK 8 T+TVAVK Sbjct: 117 TLTVAVK 123>NP_055624 Length = 1072 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 TVTVAVK 8 T+TVAVK Sbjct: 706 TLTVAVK 712>NP_001161847 Length = 1072 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 TVTVAVK 8 T+TVAVK Sbjct: 706 TLTVAVK 712>XP_006715351 Length = 920 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 TVTVAVK 8 T+TVAVK Sbjct: 554 TLTVAVK 560>XP_006715350 Length = 1040 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 TVTVAVK 8 T+TVAVK Sbjct: 768 TLTVAVK 774>XP_006715349 Length = 1101 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 TVTVAVK 8 T+TVAVK Sbjct: 735 TLTVAVK 741>XP_005249561 Length = 1134 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 TVTVAVK 8 T+TVAVK Sbjct: 768 TLTVAVK 774>XP_005265799 Length = 973 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 VTVAVKM 9 +TVAVKM Sbjct: 615 MTVAVKM 621>XP_005265798 Length = 976 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 VTVAVKM 9 +TVAVKM Sbjct: 619 MTVAVKM 625>XP_005265797 Length = 977 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 VTVAVKM 9 +TVAVKM Sbjct: 619 MTVAVKM 625Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.312 0.116 0.264 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 227,589 Number of extensions: 184 Number of successful extensions: 44 Number of sequences better than 10000.0: 44 Number of HSP's gapped: 44 Number of HSP's successfully gapped: 44 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.7 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |