Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_722576 18 1482 XP_005262424 18 1482 NP_001093321 17 2528 NP_001038945 17 2528 NP_001230175 16 5631 NP_001159756 16 7355 NP_006420 16 7355 NP_001009570 16 7355 NP_001159757 16 7355 NP_006659 16 7355 NP_001271203 16 7355 NP_061891 16 7355 NP_877497 16 7355 XP_005267331 16 7355 XP_005269612 16 7355 NP_001120704 15 9605 NP_056385 15 9605 NP_001120703 15 9605 NP_001139 15 9605 NP_775871 15 9605 XP_006715983 15 9605 XP_006714257 15 9605 XP_005263002 15 9605 XP_005262999 15 9605 XP_006714252 15 9605 XP_006714251 15 9605 XP_006714250 15 9605>NP_722576 Length = 3080 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ETSTNALSF 9 ETST ALSF Sbjct: 1179 ETSTYALSF 1187>XP_005262424 Length = 2875 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ETSTNALSF 9 ETST ALSF Sbjct: 974 ETSTYALSF 982>NP_001093321 Length = 474 Score = 17.3 bits (33), Expect = 2528 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 ETSTNAL 7 ETSTNAL Sbjct: 388 ETSTNAL 394>NP_001038945 Length = 474 Score = 17.3 bits (33), Expect = 2528 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 ETSTNAL 7 ETSTNAL Sbjct: 388 ETSTNAL 394>NP_001230175 Length = 804 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 ETSTNALS 8 +TS+NALS Sbjct: 728 DTSSNALS 735>NP_001159756 Length = 456 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ETSTNALS 8 +TS NALS Sbjct: 244 QTSVNALS 251>NP_006420 Length = 543 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ETSTNALS 8 +TS NALS Sbjct: 331 QTSVNALS 338>NP_001009570 Length = 339 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ETSTNALS 8 +TS NALS Sbjct: 127 QTSVNALS 134>NP_001159757 Length = 499 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ETSTNALS 8 +TS NALS Sbjct: 287 QTSVNALS 294>NP_006659 Length = 500 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ETSTNALSF 9 ETS N L+F Sbjct: 305 ETSANHLAF 313>NP_001271203 Length = 780 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 ETSTNAL 7 ETSTN L Sbjct: 736 ETSTNCL 742>NP_061891 Length = 356 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ETSTNALSF 9 ETS++ LSF Sbjct: 275 ETSSDPLSF 283>NP_877497 Length = 776 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 ETSTNAL 7 ETSTN L Sbjct: 732 ETSTNCL 738>XP_005267331 Length = 355 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ETSTNALSF 9 ETS N L+F Sbjct: 160 ETSANHLAF 168>XP_005269612 Length = 669 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 ETSTNAL 7 ETSTN L Sbjct: 625 ETSTNCL 631>NP_001120704 Length = 266 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 ETSTNALSF 9 E TN LSF Sbjct: 127 EALTNGLSF 135>NP_056385 Length = 1259 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 ETSTNALSF 9 E TN LSF Sbjct: 127 EALTNGLSF 135>NP_001120703 Length = 1235 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 ETSTNALSF 9 E TN LSF Sbjct: 127 EALTNGLSF 135>NP_001139 Length = 3957 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ETSTNALSF 9 ETS +LSF Sbjct: 2241 ETSPESLSF 2249>NP_775871 Length = 8384 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 TSTNALS 8 T TNALS Sbjct: 5250 TGTNALS 5256>XP_006715983 Length = 242 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 ETSTNALSF 9 E TN LSF Sbjct: 127 EALTNGLSF 135>XP_006714257 Length = 4145 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ETSTNALSF 9 ETS +LSF Sbjct: 2250 ETSPESLSF 2258>XP_005263002 Length = 4072 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ETSTNALSF 9 ETS +LSF Sbjct: 2208 ETSPESLSF 2216>XP_005262999 Length = 4147 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ETSTNALSF 9 ETS +LSF Sbjct: 2252 ETSPESLSF 2260>XP_006714252 Length = 4153 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ETSTNALSF 9 ETS +LSF Sbjct: 2258 ETSPESLSF 2266>XP_006714251 Length = 4165 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ETSTNALSF 9 ETS +LSF Sbjct: 2270 ETSPESLSF 2278>XP_006714250 Length = 4190 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ETSTNALSF 9 ETS +LSF Sbjct: 2295 ETSPESLSF 2303Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.298 0.106 0.254 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 315,712 Number of extensions: 372 Number of successful extensions: 27 Number of sequences better than 10000.0: 27 Number of HSP's gapped: 27 Number of HSP's successfully gapped: 27 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.3 bits) S2: 28 (15.4 bits)
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |