Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001275701 17 2528 NP_004561 17 2528 NP_001275703 17 2528 XP_005253450 17 2528 XP_006719151 17 2528 NP_001129126 17 4312 NP_001129125 17 4312 NP_003810 17 4312 NP_001243802 16 5631 NP_002559 16 5631 NP_001243783 16 5631 NP_001243782 16 5631 NP_001243823 16 5631 NP_001229260 16 5631 NP_001229259 16 5631 NP_001243788 16 5631 NP_001243789 16 5631 NP_001229256 16 5631 NP_001229255 16 5631 NP_001243803 16 5631 NP_001229257 16 5631 NP_001229258 16 5631 NP_001243800 16 5631 NP_001243801 16 5631 NP_001229261 16 5631 NP_001243791 16 5631 NP_001243796 16 5631 NP_001243784 16 5631 NP_001243786 16 5631 NP_001243792 16 5631 NP_001243790 16 5631 NP_001243798 16 5631 XP_005250918 16 5631 XP_006710304 16 5631 NP_958804 16 5631 NP_112241 16 5631 NP_006787 15 9605 NP_976328 15 9605 NP_001026859 15 9605 XP_005260618 15 9605 NP_001118228 15 9605>NP_001275701 Length = 1486 Score = 17.3 bits (33), Expect = 2528 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ETSAKVLIE 9 ETSAK LIE Sbjct: 472 ETSAKGLIE 480>NP_004561 Length = 1445 Score = 17.3 bits (33), Expect = 2528 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ETSAKVLIE 9 ETSAK LIE Sbjct: 472 ETSAKGLIE 480>NP_001275703 Length = 1264 Score = 17.3 bits (33), Expect = 2528 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ETSAKVLIE 9 ETSAK LIE Sbjct: 250 ETSAKGLIE 258>XP_005253450 Length = 1486 Score = 17.3 bits (33), Expect = 2528 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ETSAKVLIE 9 ETSAK LIE Sbjct: 472 ETSAKGLIE 480>XP_006719151 Length = 1486 Score = 17.3 bits (33), Expect = 2528 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ETSAKVLIE 9 ETSAK LIE Sbjct: 472 ETSAKGLIE 480>NP_001129126 Length = 631 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 TSAKVLIE 9 TSAKV++E Sbjct: 321 TSAKVMLE 328>NP_001129125 Length = 660 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 TSAKVLIE 9 TSAKV++E Sbjct: 321 TSAKVMLE 328>NP_003810 Length = 644 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 TSAKVLIE 9 TSAKV++E Sbjct: 321 TSAKVMLE 328>NP_001243802 Length = 530 Score = 16.2 bits (30), Expect = 5631 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 TSAKVLI 8 TSAKVLI Sbjct: 271 TSAKVLI 277>NP_002559 Length = 636 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 TSAKVLIE 9 TSAKV++E Sbjct: 321 TSAKVMME 328>NP_001243783 Length = 530 Score = 16.2 bits (30), Expect = 5631 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 TSAKVLI 8 TSAKVLI Sbjct: 271 TSAKVLI 277>NP_001243782 Length = 530 Score = 16.2 bits (30), Expect = 5631 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 TSAKVLI 8 TSAKVLI Sbjct: 271 TSAKVLI 277>NP_001243823 Length = 559 Score = 16.2 bits (30), Expect = 5631 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 TSAKVLI 8 TSAKVLI Sbjct: 271 TSAKVLI 277>NP_001229260 Length = 530 Score = 16.2 bits (30), Expect = 5631 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 TSAKVLI 8 TSAKVLI Sbjct: 271 TSAKVLI 277>NP_001229259 Length = 530 Score = 16.2 bits (30), Expect = 5631 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 TSAKVLI 8 TSAKVLI Sbjct: 271 TSAKVLI 277>NP_001243788 Length = 530 Score = 16.2 bits (30), Expect = 5631 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 TSAKVLI 8 TSAKVLI Sbjct: 271 TSAKVLI 277>NP_001243789 Length = 530 Score = 16.2 bits (30), Expect = 5631 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 TSAKVLI 8 TSAKVLI Sbjct: 271 TSAKVLI 277>NP_001229256 Length = 530 Score = 16.2 bits (30), Expect = 5631 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 TSAKVLI 8 TSAKVLI Sbjct: 271 TSAKVLI 277>NP_001229255 Length = 530 Score = 16.2 bits (30), Expect = 5631 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 TSAKVLI 8 TSAKVLI Sbjct: 271 TSAKVLI 277>NP_001243803 Length = 530 Score = 16.2 bits (30), Expect = 5631 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 TSAKVLI 8 TSAKVLI Sbjct: 271 TSAKVLI 277>NP_001229257 Length = 530 Score = 16.2 bits (30), Expect = 5631 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 TSAKVLI 8 TSAKVLI Sbjct: 271 TSAKVLI 277>NP_001229258 Length = 530 Score = 16.2 bits (30), Expect = 5631 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 TSAKVLI 8 TSAKVLI Sbjct: 271 TSAKVLI 277>NP_001243800 Length = 530 Score = 16.2 bits (30), Expect = 5631 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 TSAKVLI 8 TSAKVLI Sbjct: 271 TSAKVLI 277>NP_001243801 Length = 530 Score = 16.2 bits (30), Expect = 5631 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 TSAKVLI 8 TSAKVLI Sbjct: 271 TSAKVLI 277>NP_001229261 Length = 530 Score = 16.2 bits (30), Expect = 5631 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 TSAKVLI 8 TSAKVLI Sbjct: 271 TSAKVLI 277>NP_001243791 Length = 530 Score = 16.2 bits (30), Expect = 5631 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 TSAKVLI 8 TSAKVLI Sbjct: 271 TSAKVLI 277>NP_001243796 Length = 530 Score = 16.2 bits (30), Expect = 5631 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 TSAKVLI 8 TSAKVLI Sbjct: 271 TSAKVLI 277>NP_001243784 Length = 530 Score = 16.2 bits (30), Expect = 5631 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 TSAKVLI 8 TSAKVLI Sbjct: 271 TSAKVLI 277>NP_001243786 Length = 530 Score = 16.2 bits (30), Expect = 5631 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 TSAKVLI 8 TSAKVLI Sbjct: 271 TSAKVLI 277>NP_001243792 Length = 530 Score = 16.2 bits (30), Expect = 5631 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 TSAKVLI 8 TSAKVLI Sbjct: 271 TSAKVLI 277>NP_001243790 Length = 530 Score = 16.2 bits (30), Expect = 5631 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 TSAKVLI 8 TSAKVLI Sbjct: 271 TSAKVLI 277>NP_001243798 Length = 530 Score = 16.2 bits (30), Expect = 5631 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 TSAKVLI 8 TSAKVLI Sbjct: 271 TSAKVLI 277>XP_005250918 Length = 636 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 TSAKVLIE 9 TSAKV++E Sbjct: 321 TSAKVMME 328>XP_006710304 Length = 311 Score = 16.2 bits (30), Expect = 5631 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 TSAKVLI 8 TSAKVLI Sbjct: 52 TSAKVLI 58>NP_958804 Length = 530 Score = 16.2 bits (30), Expect = 5631 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 TSAKVLI 8 TSAKVLI Sbjct: 271 TSAKVLI 277>NP_112241 Length = 631 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 TSAKVLIE 9 TSAKV++E Sbjct: 321 TSAKVMME 328>NP_006787 Length = 797 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 ETSAKVL 7 ET+AKVL Sbjct: 293 ETTAKVL 299>NP_976328 Length = 911 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ETSAKVLIE 9 + +AK+LIE Sbjct: 309 DVAAKILIE 317>NP_001026859 Length = 795 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ETSAKVLIE 9 +TS KVL E Sbjct: 389 QTSGKVLYE 397>XP_005260618 Length = 614 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TSAKVLIE 9 TSAKV+ E Sbjct: 321 TSAKVMTE 328>NP_001118228 Length = 614 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TSAKVLIE 9 TSAKV+ E Sbjct: 321 TSAKVMTE 328Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.298 0.116 0.253 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 251,283 Number of extensions: 303 Number of successful extensions: 41 Number of sequences better than 10000.0: 41 Number of HSP's gapped: 41 Number of HSP's successfully gapped: 41 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.1 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |