Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_443179 22 134 NP_001139320 18 1935 NP_001139321 18 1935 NP_001139323 18 1935 NP_006008 18 1935 NP_001139322 18 1935 NP_001139324 18 1935 NP_001139319 18 1935 XP_005248253 18 1935 XP_005248252 18 1935 XP_006714036 18 1935 NP_002998 17 2528 NP_002999 17 2528 NP_079279 16 7355 NP_001165599 16 7355 NP_757366 16 7355 XP_005254400 16 7355 XP_005254399 16 7355 XP_006719245 16 7355 XP_006719244 16 7355 NP_005471 16 7355 NP_001080 15 9605 NP_059111 15 9605 NP_001244123 15 9605 NP_001244124 15 9605 NP_036549 15 9605 NP_858057 15 9605 NP_005291 15 9605 XP_005272654 15 9605 XP_005257273 15 9605 XP_005269023 15 9605 XP_005269022 15 9605 XP_005269021 15 9605 XP_006719516 15 9605 XP_005269019 15 9605 XP_006719515 15 9605 NP_057572 15 9605 NP_001137260 15 9605 NP_001137261 15 9605 NP_001137259 15 9605 NP_958847 15 9605 NP_001091048 15 9605 NP_958923 15 9605 NP_958846 15 9605 NP_958848 15 9605>NP_443179 Length = 2170 Score = 21.6 bits (44), Expect = 134 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 ETRDSHQAK 9 ETRDSHQA+ Sbjct: 468 ETRDSHQAR 476>NP_001139320 Length = 856 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 ETRDSHQA 8 ET+DSH+A Sbjct: 42 ETQDSHKA 49>NP_001139321 Length = 842 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 ETRDSHQA 8 ET+DSH+A Sbjct: 42 ETQDSHKA 49>NP_001139323 Length = 833 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 ETRDSHQA 8 ET+DSH+A Sbjct: 42 ETQDSHKA 49>NP_006008 Length = 865 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 ETRDSHQA 8 ET+DSH+A Sbjct: 42 ETQDSHKA 49>NP_001139322 Length = 834 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 ETRDSHQA 8 ET+DSH+A Sbjct: 42 ETQDSHKA 49>NP_001139324 Length = 825 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 ETRDSHQA 8 ET+DSH+A Sbjct: 42 ETQDSHKA 49>NP_001139319 Length = 856 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 ETRDSHQA 8 ET+DSH+A Sbjct: 42 ETQDSHKA 49>XP_005248253 Length = 825 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 ETRDSHQA 8 ET+DSH+A Sbjct: 42 ETQDSHKA 49>XP_005248252 Length = 833 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 ETRDSHQA 8 ET+DSH+A Sbjct: 42 ETQDSHKA 49>XP_006714036 Length = 856 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 ETRDSHQA 8 ET+DSH+A Sbjct: 42 ETQDSHKA 49>NP_002998 Length = 462 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ETRDSHQAK 9 ET++SHQ K Sbjct: 209 ETKNSHQNK 217>NP_002999 Length = 582 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ETRDSHQAK 9 ET++SHQ K Sbjct: 209 ETKNSHQNK 217>NP_079279 Length = 1910 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 ETRDSHQ 7 E +DSHQ Sbjct: 1548 ERKDSHQ 1554>NP_001165599 Length = 1331 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 ETRDSH 6 E+RDSH Sbjct: 571 ESRDSH 576>NP_757366 Length = 1332 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 ETRDSH 6 E+RDSH Sbjct: 571 ESRDSH 576>XP_005254400 Length = 1378 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 ETRDSH 6 E+RDSH Sbjct: 618 ESRDSH 623>XP_005254399 Length = 1379 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 ETRDSH 6 E+RDSH Sbjct: 618 ESRDSH 623>XP_006719245 Length = 776 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 TRDSHQA 8 TRDSH + Sbjct: 296 TRDSHDS 302>XP_006719244 Length = 868 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 TRDSHQA 8 TRDSH + Sbjct: 296 TRDSHDS 302>NP_005471 Length = 778 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 TRDSHQA 8 TRDSH + Sbjct: 296 TRDSHDS 302>NP_001080 Length = 1704 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 2 TRDSHQA 8 TRD H A Sbjct: 1173 TRDGHMA 1179>NP_059111 Length = 587 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 ETRDSHQAK 9 ETR H AK Sbjct: 226 ETRLEHMAK 234>NP_001244123 Length = 555 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 ETRDSHQAK 9 ETR H AK Sbjct: 194 ETRLEHMAK 202>NP_001244124 Length = 505 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 ETRDSHQAK 9 ETR H AK Sbjct: 144 ETRLEHMAK 152>NP_036549 Length = 332 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 3 RDSHQ 7 RDSHQ Sbjct: 174 RDSHQ 178>NP_858057 Length = 268 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 3 RDSHQ 7 RDSHQ Sbjct: 174 RDSHQ 178>NP_005291 Length = 381 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 3 RDSHQAK 9 RD H AK Sbjct: 208 RDKHNAK 214>XP_005272654 Length = 381 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 3 RDSHQAK 9 RD H AK Sbjct: 208 RDKHNAK 214>XP_005257273 Length = 309 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 3 RDSHQ 7 RDSHQ Sbjct: 151 RDSHQ 155>XP_005269023 Length = 300 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 2 TRDSHQA 8 TRD H A Sbjct: 39 TRDDHSA 45>XP_005269022 Length = 340 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 2 TRDSHQA 8 TRD H A Sbjct: 32 TRDDHSA 38>XP_005269021 Length = 355 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 2 TRDSHQA 8 TRD H A Sbjct: 94 TRDDHSA 100>XP_006719516 Length = 366 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 2 TRDSHQA 8 TRD H A Sbjct: 94 TRDDHSA 100>XP_005269019 Length = 409 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 2 TRDSHQA 8 TRD H A Sbjct: 32 TRDDHSA 38>XP_006719515 Length = 423 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 2 TRDSHQA 8 TRD H A Sbjct: 94 TRDDHSA 100>NP_057572 Length = 458 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 2 TRDSHQA 8 TRD H A Sbjct: 87 TRDDHSA 93>NP_001137260 Length = 348 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 2 TRDSHQA 8 TRD H A Sbjct: 87 TRDDHSA 93>NP_001137261 Length = 293 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 2 TRDSHQA 8 TRD H A Sbjct: 32 TRDDHSA 38>NP_001137259 Length = 434 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 2 TRDSHQA 8 TRD H A Sbjct: 32 TRDDHSA 38>NP_958847 Length = 367 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 2 TRDSHQA 8 TRD H A Sbjct: 87 TRDDHSA 93>NP_001091048 Length = 381 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 3 RDSHQAK 9 RD H AK Sbjct: 208 RDKHNAK 214>NP_958923 Length = 374 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 2 TRDSHQA 8 TRD H A Sbjct: 94 TRDDHSA 100>NP_958846 Length = 258 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 2 TRDSHQA 8 TRD H A Sbjct: 39 TRDDHSA 45>NP_958848 Length = 319 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 2 TRDSHQA 8 TRD H A Sbjct: 39 TRDDHSA 45Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.298 0.107 0.280 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 653,137 Number of extensions: 813 Number of successful extensions: 45 Number of sequences better than 10000.0: 45 Number of HSP's gapped: 45 Number of HSP's successfully gapped: 45 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.2 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |