Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_722576 20 390 XP_005262424 20 390 NP_597719 17 4312 NP_001275511 17 4312 XP_006713569 17 4312 NP_056023 16 5631 NP_001190985 16 5631 NP_001077094 16 5631 XP_006722380 16 5631 XP_005258153 16 5631 XP_005258152 16 5631 XP_005258151 16 5631 XP_005258150 16 5631 XP_005258149 16 5631 XP_006719294 16 5631 NP_001138947 16 5631 NP_059129 16 7355 NP_872301 16 7355 XP_006718829 16 7355 NP_003391 15 9605 NP_060656 15 9605 NP_005025 15 9605 NP_001165783 15 9605 NP_002661 15 9605 NP_001138791 15 9605 NP_443117 15 9605 NP_940931 15 9605 NP_001138525 15 9605 XP_006721944 15 9605 XP_006721943 15 9605 XP_006721942 15 9605 XP_006713725 15 9605 XP_006713724 15 9605 XP_006713723 15 9605 XP_006712159 15 9605 XP_006712158 15 9605 XP_005264603 15 9605 XP_005264601 15 9605 XP_006712157 15 9605 XP_005245376 15 9605 XP_005245374 15 9605 NP_659411 15 9605>NP_722576 Length = 3080 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 ETQIKSKDI 9 ETQIKS+DI Sbjct: 2290 ETQIKSRDI 2298>XP_005262424 Length = 2875 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 ETQIKSKDI 9 ETQIKS+DI Sbjct: 2085 ETQIKSRDI 2093>NP_597719 Length = 770 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ETQIKSKD 8 +TQIK KD Sbjct: 568 KTQIKEKD 575>NP_001275511 Length = 653 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ETQIKSKD 8 +TQIK KD Sbjct: 568 KTQIKEKD 575>XP_006713569 Length = 341 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ETQIKSKD 8 +TQIK KD Sbjct: 139 KTQIKEKD 146>NP_056023 Length = 2062 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TQIKSKDI 9 +QIK KDI Sbjct: 826 SQIKEKDI 833>NP_001190985 Length = 2039 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TQIKSKDI 9 +QIK KDI Sbjct: 803 SQIKEKDI 810>NP_001077094 Length = 2039 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TQIKSKDI 9 +QIK KDI Sbjct: 803 SQIKEKDI 810>XP_006722380 Length = 1769 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TQIKSKDI 9 +QIK KDI Sbjct: 533 SQIKEKDI 540>XP_005258153 Length = 2037 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TQIKSKDI 9 +QIK KDI Sbjct: 801 SQIKEKDI 808>XP_005258152 Length = 2060 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TQIKSKDI 9 +QIK KDI Sbjct: 824 SQIKEKDI 831>XP_005258151 Length = 2062 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TQIKSKDI 9 +QIK KDI Sbjct: 826 SQIKEKDI 833>XP_005258150 Length = 2062 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TQIKSKDI 9 +QIK KDI Sbjct: 826 SQIKEKDI 833>XP_005258149 Length = 2062 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TQIKSKDI 9 +QIK KDI Sbjct: 826 SQIKEKDI 833>XP_006719294 Length = 2348 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ETQIKSKD 8 E QIK+KD Sbjct: 979 ERQIKTKD 986>NP_001138947 Length = 2351 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ETQIKSKD 8 E QIK+KD Sbjct: 979 ERQIKTKD 986>NP_059129 Length = 1616 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TQIKSKDI 9 TQI+ KD+ Sbjct: 288 TQIEGKDV 295>NP_872301 Length = 559 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ETQIKSKDI 9 ET+++ KDI Sbjct: 79 ETELRIKDI 87>XP_006718829 Length = 553 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ETQIKSKDI 9 ET+++ KDI Sbjct: 73 ETELRIKDI 81>NP_003391 Length = 1071 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TQIKSKDI 9 TQ+KSK + Sbjct: 187 TQVKSKHL 194>NP_060656 Length = 853 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ETQIKSKDI 9 ++Q+K KDI Sbjct: 198 KSQLKHKDI 206>NP_005025 Length = 58 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 ETQIKSKD 8 E +IKS+D Sbjct: 25 ENEIKSRD 32>NP_001165783 Length = 629 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 QIKSKDI 9 ++KSKDI Sbjct: 82 ELKSKDI 88>NP_002661 Length = 629 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 QIKSKDI 9 ++KSKDI Sbjct: 82 ELKSKDI 88>NP_001138791 Length = 629 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 QIKSKDI 9 ++KSKDI Sbjct: 82 ELKSKDI 88>NP_443117 Length = 648 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ETQIKSKDI 9 ET+ K++DI Sbjct: 486 ETKFKTEDI 494>NP_940931 Length = 1503 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 ETQIKSK 7 ET++KSK Sbjct: 103 ETELKSK 109>NP_001138525 Length = 856 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 ETQIKSK 7 ET++KSK Sbjct: 47 ETELKSK 53>XP_006721944 Length = 1232 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 ETQIKSK 7 ET++KSK Sbjct: 103 ETELKSK 109>XP_006721943 Length = 1456 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 ETQIKSK 7 ET++KSK Sbjct: 103 ETELKSK 109>XP_006721942 Length = 1503 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 ETQIKSK 7 ET++KSK Sbjct: 103 ETELKSK 109>XP_006713725 Length = 629 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 QIKSKDI 9 ++KSKDI Sbjct: 82 ELKSKDI 88>XP_006713724 Length = 629 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 QIKSKDI 9 ++KSKDI Sbjct: 82 ELKSKDI 88>XP_006713723 Length = 629 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 QIKSKDI 9 ++KSKDI Sbjct: 82 ELKSKDI 88>XP_006712159 Length = 904 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TQIKSKDI 9 TQ+KSK + Sbjct: 20 TQVKSKHL 27>XP_006712158 Length = 904 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TQIKSKDI 9 TQ+KSK + Sbjct: 20 TQVKSKHL 27>XP_005264603 Length = 940 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TQIKSKDI 9 TQ+KSK + Sbjct: 56 TQVKSKHL 63>XP_005264601 Length = 1056 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TQIKSKDI 9 TQ+KSK + Sbjct: 172 TQVKSKHL 179>XP_006712157 Length = 1071 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TQIKSKDI 9 TQ+KSK + Sbjct: 187 TQVKSKHL 194>XP_005245376 Length = 718 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ETQIKSKDI 9 ++Q+K KDI Sbjct: 63 KSQLKHKDI 71>XP_005245374 Length = 911 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ETQIKSKDI 9 ++Q+K KDI Sbjct: 256 KSQLKHKDI 264>NP_659411 Length = 273 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 ETQIKS 6 ETQIKS Sbjct: 94 ETQIKS 99Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.298 0.119 0.276 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 469,185 Number of extensions: 799 Number of successful extensions: 42 Number of sequences better than 10000.0: 42 Number of HSP's gapped: 42 Number of HSP's successfully gapped: 42 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.1 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |