Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005219 20 390 NP_060380 17 2528 XP_005264451 17 2528 XP_006712100 17 2528 XP_005264450 17 2528 NP_001191818 17 4312 NP_000681 17 4312 NP_056080 17 4312 NP_001165980 17 4312 NP_001165988 17 4312 XP_005246453 17 4312 XP_006712435 17 4312 NP_001139669 17 4312 NP_001036064 16 5631 NP_005226 16 5631 NP_001276866 16 5631 NP_004439 16 5631 NP_001276865 16 5631 NP_001005862 16 5631 NP_981953 16 5631 NP_055665 16 5631 NP_001028289 16 5631 XP_005257197 16 5631 XP_006721828 16 5631 XP_005265679 16 5631 XP_005246434 16 5631 XP_005246433 16 5631 XP_005246432 16 5631 XP_006712427 16 5631 NP_001104262 16 7355 NP_000148 16 7355 NP_001005742 16 7355 NP_001165282 16 7355 NP_001005741 16 7355 NP_001973 16 7355 NP_004983 16 7355 NP_001026862 16 7355 NP_005815 16 7355 NP_055796 16 7355 NP_060827 16 7355 XP_006726274 16 7355 XP_005274738 16 7355 XP_005250165 16 7355 XP_006711333 16 7355 NP_001070665 15 9605 NP_001136157 15 9605 NP_001158307 15 9605 NP_061952 15 9605 NP_055336 15 9605 NP_065108 15 9605 XP_006719056 15 9605 XP_006714952 15 9605 XP_006714951 15 9605 XP_005265995 15 9605 XP_005264070 15 9605 NP_060255 15 9605 NP_789795 15 9605 NP_001047 15 9605>NP_005219 Length = 1210 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 ETKFKKIKV 9 ET+FKKIKV Sbjct: 709 ETEFKKIKV 717>NP_060380 Length = 477 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 ETKFKKI 7 ETKFKK+ Sbjct: 165 ETKFKKL 171>XP_005264451 Length = 240 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 ETKFKKI 7 ETKFKK+ Sbjct: 165 ETKFKKL 171>XP_006712100 Length = 379 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 ETKFKKI 7 ETKFKK+ Sbjct: 165 ETKFKKL 171>XP_005264450 Length = 468 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 ETKFKKI 7 ETKFKK+ Sbjct: 165 ETKFKKL 171>NP_001191818 Length = 470 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 ETKFKKI 7 ET+FKKI Sbjct: 317 ETQFKKI 323>NP_000681 Length = 517 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 ETKFKKI 7 ET+FKKI Sbjct: 364 ETQFKKI 370>NP_056080 Length = 733 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 KFKKIKV 9 K+KKIKV Sbjct: 228 KYKKIKV 234>NP_001165980 Length = 733 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 KFKKIKV 9 K+KKIKV Sbjct: 228 KYKKIKV 234>NP_001165988 Length = 733 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 KFKKIKV 9 K+KKIKV Sbjct: 228 KYKKIKV 234>XP_005246453 Length = 675 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 KFKKIKV 9 K+KKIKV Sbjct: 170 KYKKIKV 176>XP_006712435 Length = 733 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 KFKKIKV 9 K+KKIKV Sbjct: 228 KYKKIKV 234>NP_001139669 Length = 7081 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 ETKFKKI 7 +TKFKKI Sbjct: 1394 KTKFKKI 1400>NP_001036064 Length = 1292 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ETKFKKIKV 9 ET+ K++KV Sbjct: 715 ETELKRVKV 723>NP_005226 Length = 1308 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ETKFKKIKV 9 ET+ K++KV Sbjct: 715 ETELKRVKV 723>NP_001276866 Length = 1055 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ETKFKKIKV 9 ET+ +K+KV Sbjct: 717 ETELRKVKV 725>NP_004439 Length = 1255 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ETKFKKIKV 9 ET+ +K+KV Sbjct: 717 ETELRKVKV 725>NP_001276865 Length = 1240 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ETKFKKIKV 9 ET+ +K+KV Sbjct: 702 ETELRKVKV 710>NP_001005862 Length = 1225 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ETKFKKIKV 9 ET+ +K+KV Sbjct: 687 ETELRKVKV 695>NP_981953 Length = 791 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 ETKFKKIK 8 + KFKK+K Sbjct: 641 DQKFKKVK 648>NP_055665 Length = 1099 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ETKFKKIK 8 +TKFKK K Sbjct: 4 QTKFKKDK 11>NP_001028289 Length = 1075 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ETKFKKIK 8 +TKFKK K Sbjct: 4 QTKFKKDK 11>XP_005257197 Length = 1225 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ETKFKKIKV 9 ET+ +K+KV Sbjct: 687 ETELRKVKV 695>XP_006721828 Length = 1336 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ETKFKKIKV 9 ET+ +K+KV Sbjct: 798 ETELRKVKV 806>XP_005265679 Length = 858 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ETKFKKIK 8 +TKFKK K Sbjct: 4 QTKFKKDK 11>XP_005246434 Length = 1282 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ETKFKKIKV 9 ET+ K++KV Sbjct: 705 ETELKRVKV 713>XP_005246433 Length = 1298 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ETKFKKIKV 9 ET+ K++KV Sbjct: 705 ETELKRVKV 713>XP_005246432 Length = 1307 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ETKFKKIKV 9 ET+ K++KV Sbjct: 730 ETELKRVKV 738>XP_006712427 Length = 1323 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ETKFKKIKV 9 ET+ K++KV Sbjct: 730 ETELKRVKV 738>NP_001104262 Length = 498 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 KFKKIK 8 KFKK+K Sbjct: 39 KFKKVK 44>NP_000148 Length = 536 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 ETKFKKIK 8 E KF+K+K Sbjct: 111 EQKFQKVK 118>NP_001005742 Length = 536 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 ETKFKKIK 8 E KF+K+K Sbjct: 111 EQKFQKVK 118>NP_001165282 Length = 449 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 ETKFKKIK 8 E KF+K+K Sbjct: 24 EQKFQKVK 31>NP_001005741 Length = 536 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 ETKFKKIK 8 E KF+K+K Sbjct: 111 EQKFQKVK 118>NP_001973 Length = 1342 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ETKFKKIKV 9 ET+ +K+KV Sbjct: 706 ETELRKLKV 714>NP_004983 Length = 486 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 KFKKIK 8 KFKK+K Sbjct: 27 KFKKVK 32>NP_001026862 Length = 441 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 TKFKKIK 8 +KFKK+K Sbjct: 102 SKFKKLK 108>NP_005815 Length = 313 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 TKFKKIK 8 +KFKK+K Sbjct: 102 SKFKKLK 108>NP_055796 Length = 1946 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 ETKFKKI 7 ETKF+K+ Sbjct: 1180 ETKFQKL 1186>NP_060827 Length = 491 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 TKFKKIK 8 T FKK+K Sbjct: 133 TSFKKVK 139>XP_006726274 Length = 536 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 ETKFKKIK 8 E KF+K+K Sbjct: 111 EQKFQKVK 118>XP_005274738 Length = 486 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 KFKKIK 8 KFKK+K Sbjct: 27 KFKKVK 32>XP_005250165 Length = 441 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 TKFKKIK 8 +KFKK+K Sbjct: 102 SKFKKLK 108>XP_006711333 Length = 536 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 ETKFKKIK 8 E KF+K+K Sbjct: 111 EQKFQKVK 118>NP_001070665 Length = 683 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 TKFKKIKV 9 T++KK+K+ Sbjct: 17 TQWKKVKI 24>NP_001136157 Length = 2087 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 ETKFKKIK 8 E KF+K+K Sbjct: 35 EEKFRKMK 42>NP_001158307 Length = 865 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 ETKFKKIK 8 E KF+K+K Sbjct: 214 ERKFQKLK 221>NP_061952 Length = 865 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 ETKFKKIK 8 E KF+K+K Sbjct: 214 ERKFQKLK 221>NP_055336 Length = 963 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 ETKFKKIKV 9 ET F IKV Sbjct: 32 ETSFNDIKV 40>NP_065108 Length = 270 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 ETKFKKIKV 9 ET+F K K+ Sbjct: 13 ETRFNKEKI 21>XP_006719056 Length = 244 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 ETKFKKIKV 9 ET+F K K+ Sbjct: 13 ETRFNKEKI 21>XP_006714952 Length = 534 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ETKFKKIKV 9 +TK +K+KV Sbjct: 39 KTKIEKLKV 47>XP_006714951 Length = 534 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ETKFKKIKV 9 +TK +K+KV Sbjct: 39 KTKIEKLKV 47>XP_005265995 Length = 605 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ETKFKKIKV 9 +TK +K+KV Sbjct: 110 KTKIEKLKV 118>XP_005264070 Length = 298 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 ETKFKKIK 8 ET F+K+K Sbjct: 229 ETSFEKMK 236>NP_060255 Length = 605 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ETKFKKIKV 9 +TK +K+KV Sbjct: 110 KTKIEKLKV 118>NP_789795 Length = 307 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 ETKFKKIK 8 ET F+K+K Sbjct: 238 ETSFEKMK 245>NP_001047 Length = 296 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 ETKFKKIK 8 ET F+K+K Sbjct: 227 ETSFEKMK 234Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.315 0.132 0.326 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 411,352 Number of extensions: 781 Number of successful extensions: 58 Number of sequences better than 10000.0: 58 Number of HSP's gapped: 58 Number of HSP's successfully gapped: 58 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.7 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |