Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000042 22 103 XP_006718908 22 103 XP_005271621 22 103 XP_006718907 22 103 XP_006718906 22 103 XP_005271619 22 103 XP_005271618 22 103 NP_004949 20 390 XP_005263496 20 390 XP_005263495 20 390 NP_008835 19 869 NP_001075109 19 869 XP_005249801 18 1482 NP_861456 18 1482 NP_001175 18 1935 NP_055907 17 2528 XP_005255242 17 2528 XP_005255241 17 2528 XP_005255240 17 2528 XP_005255239 17 2528 NP_115892 17 3301 NP_001035269 17 3301 NP_001035706 17 4312 NP_037522 17 4312 NP_001129292 17 4312 XP_005255000 17 4312 XP_005254998 17 4312 XP_005251926 17 4312 NP_001231509 16 5631 NP_003487 16 5631 NP_001888 16 5631 NP_068781 16 7355 NP_061722 16 7355 NP_001153218 16 7355 NP_001269078 16 7355 NP_001083 16 7355 XP_006725360 16 7355 XP_006725359 16 7355 XP_006725358 16 7355 XP_006725357 16 7355 XP_006725356 16 7355 XP_006725355 16 7355 XP_006721575 16 7355 XP_006721574 16 7355 XP_006721573 16 7355 XP_006721572 16 7355 XP_006721571 16 7355 XP_006721570 16 7355 XP_006721569 16 7355 NP_114089 16 7355 NP_536350 15 9605 NP_002556 15 9605 NP_689603 15 9605 NP_004236 15 9605 NP_963925 15 9605 XP_005264201 15 9605>NP_000042 Length = 3056 Score = 21.9 bits (45), Expect = 103 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 ETIPFRLTR 9 ET+PFRLTR Sbjct: 2904 ETVPFRLTR 2912>XP_006718908 Length = 1708 Score = 21.9 bits (45), Expect = 103 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 ETIPFRLTR 9 ET+PFRLTR Sbjct: 1556 ETVPFRLTR 1564>XP_005271621 Length = 2708 Score = 21.9 bits (45), Expect = 103 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 ETIPFRLTR 9 ET+PFRLTR Sbjct: 2556 ETVPFRLTR 2564>XP_006718907 Length = 3050 Score = 21.9 bits (45), Expect = 103 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 ETIPFRLTR 9 ET+PFRLTR Sbjct: 2898 ETVPFRLTR 2906>XP_006718906 Length = 3056 Score = 21.9 bits (45), Expect = 103 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 ETIPFRLTR 9 ET+PFRLTR Sbjct: 2904 ETVPFRLTR 2912>XP_005271619 Length = 3056 Score = 21.9 bits (45), Expect = 103 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 ETIPFRLTR 9 ET+PFRLTR Sbjct: 2904 ETVPFRLTR 2912>XP_005271618 Length = 3056 Score = 21.9 bits (45), Expect = 103 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 ETIPFRLTR 9 ET+PFRLTR Sbjct: 2904 ETVPFRLTR 2912>NP_004949 Length = 2549 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ETIPFRLTR 9 E IPFRLTR Sbjct: 2373 EKIPFRLTR 2381>XP_005263496 Length = 2322 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ETIPFRLTR 9 E IPFRLTR Sbjct: 2146 EKIPFRLTR 2154>XP_005263495 Length = 2549 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ETIPFRLTR 9 E IPFRLTR Sbjct: 2373 EKIPFRLTR 2381>NP_008835 Length = 4128 Score = 18.9 bits (37), Expect = 869 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 ETIPFRLTR 9 E +PFRLTR Sbjct: 3957 ELMPFRLTR 3965>NP_001075109 Length = 4097 Score = 18.9 bits (37), Expect = 869 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 ETIPFRLTR 9 E +PFRLTR Sbjct: 3926 ELMPFRLTR 3934>XP_005249801 Length = 324 Score = 18.1 bits (35), Expect = 1482 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 TIPFRLT 8 T+PFRLT Sbjct: 87 TVPFRLT 93>NP_861456 Length = 305 Score = 18.1 bits (35), Expect = 1482 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 TIPFRLT 8 T+PFRLT Sbjct: 68 TVPFRLT 74>NP_001175 Length = 2644 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ETIPFRLT 8 E +PFRLT Sbjct: 2509 EIVPFRLT 2516>NP_055907 Length = 3661 Score = 17.3 bits (33), Expect = 2528 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ETIPFRLTR 9 E +PFR+T+ Sbjct: 2369 EKVPFRMTQ 2377>XP_005255242 Length = 3609 Score = 17.3 bits (33), Expect = 2528 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ETIPFRLTR 9 E +PFR+T+ Sbjct: 2317 EKVPFRMTQ 2325>XP_005255241 Length = 3637 Score = 17.3 bits (33), Expect = 2528 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ETIPFRLTR 9 E +PFR+T+ Sbjct: 2345 EKVPFRMTQ 2353>XP_005255240 Length = 3663 Score = 17.3 bits (33), Expect = 2528 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ETIPFRLTR 9 E +PFR+T+ Sbjct: 2371 EKVPFRMTQ 2379>XP_005255239 Length = 3689 Score = 17.3 bits (33), Expect = 2528 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ETIPFRLTR 9 E +PFR+T+ Sbjct: 2397 EKVPFRMTQ 2405>NP_115892 Length = 340 Score = 16.9 bits (32), Expect = 3301 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 PFRLTR 9 PFRLTR Sbjct: 138 PFRLTR 143>NP_001035269 Length = 340 Score = 16.9 bits (32), Expect = 3301 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 PFRLTR 9 PFRLTR Sbjct: 138 PFRLTR 143>NP_001035706 Length = 757 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ETIPFRLT 8 +TIP RLT Sbjct: 571 QTIPHRLT 578>NP_037522 Length = 1383 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 TIPFRLT 8 ++PFRLT Sbjct: 1254 SVPFRLT 1260>NP_001129292 Length = 1320 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 TIPFRLT 8 ++PFRLT Sbjct: 1191 SVPFRLT 1197>XP_005255000 Length = 721 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ETIPFRLT 8 +TIP RLT Sbjct: 535 QTIPHRLT 542>XP_005254998 Length = 757 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ETIPFRLT 8 +TIP RLT Sbjct: 571 QTIPHRLT 578>XP_005251926 Length = 1383 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 TIPFRLT 8 ++PFRLT Sbjct: 1254 SVPFRLT 1260>NP_001231509 Length = 3859 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 IPFRLT 8 +PFRLT Sbjct: 3727 VPFRLT 3732>NP_003487 Length = 3830 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 IPFRLT 8 +PFRLT Sbjct: 3698 VPFRLT 3703>NP_001888 Length = 2322 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TIPFRLTR 9 ++P RLTR Sbjct: 1838 SVPLRLTR 1845>NP_068781 Length = 859 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 TIPFRL 7 TIPFR+ Sbjct: 424 TIPFRI 429>NP_061722 Length = 1007 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 TIPFRL 7 T+PFRL Sbjct: 407 TLPFRL 412>NP_001153218 Length = 813 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 TIPFRL 7 TIPFR+ Sbjct: 378 TIPFRI 383>NP_001269078 Length = 641 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 TIPFRL 7 TIPFR+ Sbjct: 206 TIPFRI 211>NP_001083 Length = 822 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 TIPFRL 7 TIPFR+ Sbjct: 387 TIPFRI 392>XP_006725360 Length = 776 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 TIPFRL 7 TIPFR+ Sbjct: 334 TIPFRI 339>XP_006725359 Length = 820 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 TIPFRL 7 TIPFR+ Sbjct: 378 TIPFRI 383>XP_006725358 Length = 820 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 TIPFRL 7 TIPFR+ Sbjct: 378 TIPFRI 383>XP_006725357 Length = 829 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 TIPFRL 7 TIPFR+ Sbjct: 387 TIPFRI 392>XP_006725356 Length = 866 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 TIPFRL 7 TIPFR+ Sbjct: 424 TIPFRI 429>XP_006725355 Length = 871 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 TIPFRL 7 TIPFR+ Sbjct: 436 TIPFRI 441>XP_006721575 Length = 776 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 TIPFRL 7 TIPFR+ Sbjct: 334 TIPFRI 339>XP_006721574 Length = 820 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 TIPFRL 7 TIPFR+ Sbjct: 378 TIPFRI 383>XP_006721573 Length = 820 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 TIPFRL 7 TIPFR+ Sbjct: 378 TIPFRI 383>XP_006721572 Length = 829 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 TIPFRL 7 TIPFR+ Sbjct: 387 TIPFRI 392>XP_006721571 Length = 866 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 TIPFRL 7 TIPFR+ Sbjct: 424 TIPFRI 429>XP_006721570 Length = 1118 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 TIPFRL 7 TIPFR+ Sbjct: 683 TIPFRI 688>XP_006721569 Length = 1125 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 TIPFRL 7 TIPFR+ Sbjct: 683 TIPFRI 688>NP_114089 Length = 884 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 TIPFRL 7 T+PFRL Sbjct: 407 TLPFRL 412>NP_536350 Length = 1037 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 ETIPFRL 7 ET+PF L Sbjct: 222 ETMPFEL 228>NP_002556 Length = 365 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 3 IPFRLTR 9 +PF +TR Sbjct: 259 VPFHITR 265>NP_689603 Length = 297 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 IPFRLTR 9 IPF LT+ Sbjct: 155 IPFNLTK 161>NP_004236 Length = 638 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 ETIPFR 6 ET+PF+ Sbjct: 603 ETVPFK 608>NP_963925 Length = 720 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 ETIPFR 6 ET+PF+ Sbjct: 685 ETVPFK 690>XP_005264201 Length = 251 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 IPFRLTR 9 IPF LT+ Sbjct: 155 IPFNLTK 161Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.333 0.147 0.435 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 483,762 Number of extensions: 708 Number of successful extensions: 56 Number of sequences better than 10000.0: 56 Number of HSP's gapped: 56 Number of HSP's successfully gapped: 56 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.2 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |