Cancertope

In silico Platform for designing genome-based
Personalized immunotherapy or Vaccine against Cancer

Blast-Search of mutated query peptide against human proteome

BLAST Search Results
BLASTP 2.2.15 [Oct-15-2006]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= User_input
         (9 letters)

Database: HUMAN_PROTEOME_FASTA 
           71,491 sequences; 45,948,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

NP_733751                                                              18    1482
XP_006716142                                                           18    1482
XP_005250088                                                           18    1482
XP_006716141                                                           18    1482
XP_005250085                                                           18    1482
XP_006716140                                                           18    1482
XP_005250084                                                           18    1482
XP_005250083                                                           18    1482
XP_005250082                                                           18    1482
NP_001019832                                                           17    4312
NP_001278309                                                           17    4312
NP_075390                                                              17    4312
NP_075389                                                              17    4312
XP_006725017                                                           17    4312
XP_006711144                                                           17    4312
NP_001093259                                                           16    7355
NP_001093258                                                           16    7355
NP_001093257                                                           16    7355
NP_000864                                                              16    7355
NP_056284                                                              16    7355
NP_060846                                                              16    7355
XP_006714302                                                           16    7355
XP_005263127                                                           16    7355
NP_061908                                                              16    7355
NP_115882                                                              16    7355
NP_001093256                                                           16    7355
NP_001240781                                                           15    9605
NP_006585                                                              15    9605
NP_001240782                                                           15    9605
NP_004000                                                              15    9605
NP_004001                                                              15    9605
NP_003997                                                              15    9605
NP_000100                                                              15    9605
NP_006166                                                              15    9605
NP_001248392                                                           15    9605
NP_932326                                                              15    9605
NP_060487                                                              15    9605
XP_006724539                                                           15    9605
XP_006724538                                                           15    9605
XP_006724537                                                           15    9605
XP_006724536                                                           15    9605
XP_006724535                                                           15    9605
XP_006724534                                                           15    9605
XP_006724533                                                           15    9605
XP_006724532                                                           15    9605
XP_006724531                                                           15    9605
XP_005269994                                                           15    9605
XP_005269924                                                           15    9605
XP_005269922                                                           15    9605
XP_006717933                                                           15    9605
XP_005269921                                                           15    9605
XP_005272075                                                           15    9605
XP_005270438                                                           15    9605
NP_057688                                                              15    9605
>NP_733751
          Length = 4911

 Score = 18.1 bits (35), Expect =  1482
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1   ESVNSLVSV 9
           ES NSLVSV
Sbjct: 115 ESANSLVSV 123
>XP_006716142
          Length = 4927

 Score = 18.1 bits (35), Expect =  1482
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1   ESVNSLVSV 9
           ES NSLVSV
Sbjct: 116 ESANSLVSV 124
>XP_005250088
          Length = 4928

 Score = 18.1 bits (35), Expect =  1482
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1   ESVNSLVSV 9
           ES NSLVSV
Sbjct: 116 ESANSLVSV 124
>XP_006716141
          Length = 4959

 Score = 18.1 bits (35), Expect =  1482
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1   ESVNSLVSV 9
           ES NSLVSV
Sbjct: 116 ESANSLVSV 124
>XP_005250085
          Length = 4979

 Score = 18.1 bits (35), Expect =  1482
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1   ESVNSLVSV 9
           ES NSLVSV
Sbjct: 116 ESANSLVSV 124
>XP_006716140
          Length = 4982

 Score = 18.1 bits (35), Expect =  1482
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1   ESVNSLVSV 9
           ES NSLVSV
Sbjct: 116 ESANSLVSV 124
>XP_005250084
          Length = 4982

 Score = 18.1 bits (35), Expect =  1482
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1   ESVNSLVSV 9
           ES NSLVSV
Sbjct: 116 ESANSLVSV 124
>XP_005250083
          Length = 4982

 Score = 18.1 bits (35), Expect =  1482
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1   ESVNSLVSV 9
           ES NSLVSV
Sbjct: 115 ESANSLVSV 123
>XP_005250082
          Length = 4983

 Score = 18.1 bits (35), Expect =  1482
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1   ESVNSLVSV 9
           ES NSLVSV
Sbjct: 116 ESANSLVSV 124
>NP_001019832
          Length = 474

 Score = 16.5 bits (31), Expect =  4312
 Identities = 7/9 (77%), Positives = 8/9 (88%)

Query: 1   ESVNSLVSV 9
           ES+NSLV V
Sbjct: 417 ESLNSLVRV 425
>NP_001278309
          Length = 474

 Score = 16.5 bits (31), Expect =  4312
 Identities = 7/9 (77%), Positives = 8/9 (88%)

Query: 1   ESVNSLVSV 9
           ES+NSLV V
Sbjct: 417 ESLNSLVRV 425
>NP_075390
          Length = 474

 Score = 16.5 bits (31), Expect =  4312
 Identities = 7/9 (77%), Positives = 8/9 (88%)

Query: 1   ESVNSLVSV 9
           ES+NSLV V
Sbjct: 417 ESLNSLVRV 425
>NP_075389
          Length = 474

 Score = 16.5 bits (31), Expect =  4312
 Identities = 7/9 (77%), Positives = 8/9 (88%)

Query: 1   ESVNSLVSV 9
           ES+NSLV V
Sbjct: 417 ESLNSLVRV 425
>XP_006725017
          Length = 229

 Score = 16.5 bits (31), Expect =  4312
 Identities = 7/9 (77%), Positives = 8/9 (88%)

Query: 1   ESVNSLVSV 9
           ES+NSLV V
Sbjct: 172 ESLNSLVRV 180
>XP_006711144
          Length = 229

 Score = 16.5 bits (31), Expect =  4312
 Identities = 7/9 (77%), Positives = 8/9 (88%)

Query: 1   ESVNSLVSV 9
           ES+NSLV V
Sbjct: 172 ESLNSLVRV 180
>NP_001093259
          Length = 275

 Score = 15.8 bits (29), Expect =  7355
 Identities = 7/9 (77%), Positives = 8/9 (88%)

Query: 1   ESVNSLVSV 9
           ES+NS VSV
Sbjct: 100 ESMNSNVSV 108
>NP_001093258
          Length = 275

 Score = 15.8 bits (29), Expect =  7355
 Identities = 7/9 (77%), Positives = 8/9 (88%)

Query: 1   ESVNSLVSV 9
           ES+NS VSV
Sbjct: 100 ESMNSNVSV 108
>NP_001093257
          Length = 275

 Score = 15.8 bits (29), Expect =  7355
 Identities = 7/9 (77%), Positives = 8/9 (88%)

Query: 1   ESVNSLVSV 9
           ES+NS VSV
Sbjct: 100 ESMNSNVSV 108
>NP_000864
          Length = 275

 Score = 15.8 bits (29), Expect =  7355
 Identities = 7/9 (77%), Positives = 8/9 (88%)

Query: 1   ESVNSLVSV 9
           ES+NS VSV
Sbjct: 100 ESMNSNVSV 108
>NP_056284
          Length = 247

 Score = 15.8 bits (29), Expect =  7355
 Identities = 7/8 (87%), Positives = 7/8 (87%)

Query: 1   ESVNSLVS 8
           ESVN LVS
Sbjct: 225 ESVNYLVS 232
>NP_060846
          Length = 247

 Score = 15.8 bits (29), Expect =  7355
 Identities = 7/8 (87%), Positives = 7/8 (87%)

Query: 1   ESVNSLVS 8
           ESVN LVS
Sbjct: 225 ESVNYLVS 232
>XP_006714302
          Length = 916

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/9 (55%), Positives = 9/9 (100%)

Query: 1   ESVNSLVSV 9
           +S+NSLV++
Sbjct: 800 QSLNSLVTI 808
>XP_005263127
          Length = 1134

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/9 (55%), Positives = 9/9 (100%)

Query: 1   ESVNSLVSV 9
           +S+NSLV++
Sbjct: 800 QSLNSLVTI 808
>NP_061908
          Length = 1135

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/9 (55%), Positives = 9/9 (100%)

Query: 1   ESVNSLVSV 9
           +S+NSLV++
Sbjct: 800 QSLNSLVTI 808
>NP_115882
          Length = 423

 Score = 15.8 bits (29), Expect =  7355
 Identities = 7/8 (87%), Positives = 7/8 (87%)

Query: 1   ESVNSLVS 8
           ESVN LVS
Sbjct: 177 ESVNLLVS 184
>NP_001093256
          Length = 275

 Score = 15.8 bits (29), Expect =  7355
 Identities = 7/9 (77%), Positives = 8/9 (88%)

Query: 1   ESVNSLVSV 9
           ES+NS VSV
Sbjct: 100 ESMNSNVSV 108
>NP_001240781
          Length = 739

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   ESVNSLVSV 9
           E++NS +SV
Sbjct: 718 ETLNSFISV 726
>NP_006585
          Length = 739

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   ESVNSLVSV 9
           E++NS +SV
Sbjct: 718 ETLNSFISV 726
>NP_001240782
          Length = 640

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   ESVNSLVSV 9
           E++NS +SV
Sbjct: 619 ETLNSFISV 627
>NP_004000
          Length = 3681

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 1    ESVNSLVS 8
            ESVNS+++
Sbjct: 1215 ESVNSVIA 1222
>NP_004001
          Length = 3562

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 1    ESVNSLVS 8
            ESVNS+++
Sbjct: 1096 ESVNSVIA 1103
>NP_003997
          Length = 3685

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 1    ESVNSLVS 8
            ESVNS+++
Sbjct: 1219 ESVNSVIA 1226
>NP_000100
          Length = 3677

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 1    ESVNSLVS 8
            ESVNS+++
Sbjct: 1211 ESVNSVIA 1218
>NP_006166
          Length = 1695

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1   ESVNSLVS 8
           +SVN LVS
Sbjct: 362 QSVNKLVS 369
>NP_001248392
          Length = 1731

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1   ESVNSLVS 8
           +SVN LVS
Sbjct: 362 QSVNKLVS 369
>NP_932326
          Length = 1730

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1   ESVNSLVS 8
           +SVN LVS
Sbjct: 362 QSVNKLVS 369
>NP_060487
          Length = 898

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 1   ESVNSLVS 8
           ES+NSL++
Sbjct: 565 ESLNSLIN 572
>XP_006724539
          Length = 2913

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 1   ESVNSLVS 8
           ESVNS+++
Sbjct: 429 ESVNSVIA 436
>XP_006724538
          Length = 3575

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 1    ESVNSLVS 8
            ESVNS+++
Sbjct: 1219 ESVNSVIA 1226
>XP_006724537
          Length = 3593

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 1    ESVNSLVS 8
            ESVNS+++
Sbjct: 1219 ESVNSVIA 1226
>XP_006724536
          Length = 3657

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 1    ESVNSLVS 8
            ESVNS+++
Sbjct: 1219 ESVNSVIA 1226
>XP_006724535
          Length = 3660

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 1    ESVNSLVS 8
            ESVNS+++
Sbjct: 1176 ESVNSVIA 1183
>XP_006724534
          Length = 3668

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 1    ESVNSLVS 8
            ESVNS+++
Sbjct: 1219 ESVNSVIA 1226
>XP_006724533
          Length = 3690

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 1    ESVNSLVS 8
            ESVNS+++
Sbjct: 1219 ESVNSVIA 1226
>XP_006724532
          Length = 3695

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 1    ESVNSLVS 8
            ESVNS+++
Sbjct: 1211 ESVNSVIA 1218
>XP_006724531
          Length = 3703

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 1    ESVNSLVS 8
            ESVNS+++
Sbjct: 1219 ESVNSVIA 1226
>XP_005269994
          Length = 898

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 1   ESVNSLVS 8
           ES+NSL++
Sbjct: 565 ESLNSLIN 572
>XP_005269924
          Length = 1627

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1   ESVNSLVS 8
           +SVN LVS
Sbjct: 362 QSVNKLVS 369
>XP_005269922
          Length = 1695

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1   ESVNSLVS 8
           +SVN LVS
Sbjct: 362 QSVNKLVS 369
>XP_006717933
          Length = 1696

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1   ESVNSLVS 8
           +SVN LVS
Sbjct: 362 QSVNKLVS 369
>XP_005269921
          Length = 1696

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1   ESVNSLVS 8
           +SVN LVS
Sbjct: 362 QSVNKLVS 369
>XP_005272075
          Length = 1561

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 1   ESVNSLVS 8
           E+VN+L+S
Sbjct: 176 ETVNALIS 183
>XP_005270438
          Length = 635

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   ESVNSLVSV 9
           E++NS +SV
Sbjct: 614 ETLNSFISV 622
>NP_057688
          Length = 1761

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 1   ESVNSLVS 8
           E+VN+L+S
Sbjct: 176 ETVNALIS 183
  Database: HUMAN_PROTEOME_FASTA
    Posted date:  May 26, 2014 10:46 AM
  Number of letters in database: 45,948,801
  Number of sequences in database:  71,491
  
Lambda     K      H
   0.293    0.110    0.233 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 71491
Number of Hits to DB: 276,100
Number of extensions: 286
Number of successful extensions: 54
Number of sequences better than 10000.0: 54
Number of HSP's gapped: 54
Number of HSP's successfully gapped: 54
Length of query: 9
Length of database: 45,948,801
Length adjustment: 0
Effective length of query: 9
Effective length of database: 45,948,801
Effective search space: 413539209
Effective search space used: 413539209
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 17 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 28 (15.0 bits)
S2: 28 (15.4 bits)

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