Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_722576 18 1135 XP_005262424 18 1135 NP_078966 17 3301 NP_891548 16 7355 NP_001129627 16 7355 NP_001129626 16 7355 NP_001278320 16 7355 NP_001230361 16 7355 NP_001230357 16 7355 NP_001473 15 9605 XP_006721879 15 9605 XP_006721878 15 9605 XP_006721877 15 9605 XP_006721876 15 9605 XP_005257269 15 9605 XP_006721875 15 9605 XP_005257264 15 9605 NP_056469 15 9605>NP_722576 Length = 3080 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ESTQRVTAS 9 ES QRVTAS Sbjct: 873 ESAQRVTAS 881>XP_005262424 Length = 2875 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ESTQRVTAS 9 ES QRVTAS Sbjct: 668 ESAQRVTAS 676>NP_078966 Length = 14507 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 STQRVTAS 9 STQRVT S Sbjct: 1172 STQRVTTS 1179>NP_891548 Length = 479 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 ESTQRVT 7 E+TQR+T Sbjct: 239 EATQRIT 245>NP_001129627 Length = 387 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 ESTQRVT 7 E+TQR+T Sbjct: 147 EATQRIT 153>NP_001129626 Length = 486 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 ESTQRVT 7 E+TQR+T Sbjct: 246 EATQRIT 252>NP_001278320 Length = 325 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 ESTQRVT 7 E+TQR+T Sbjct: 246 EATQRIT 252>NP_001230361 Length = 317 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 ESTQRVT 7 E+TQR+T Sbjct: 246 EATQRIT 252>NP_001230357 Length = 486 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 ESTQRVT 7 E+TQR+T Sbjct: 246 EATQRIT 252>NP_001473 Length = 423 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ESTQRVTAS 9 +STQ TAS Sbjct: 37 QSTQAATAS 45>XP_006721879 Length = 112 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ESTQRVTAS 9 E QR+TAS Sbjct: 34 EELQRLTAS 42>XP_006721878 Length = 134 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ESTQRVTAS 9 E QR+TAS Sbjct: 34 EELQRLTAS 42>XP_006721877 Length = 135 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ESTQRVTAS 9 E QR+TAS Sbjct: 35 EELQRLTAS 43>XP_006721876 Length = 176 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ESTQRVTAS 9 E QR+TAS Sbjct: 4 EELQRLTAS 12>XP_005257269 Length = 176 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ESTQRVTAS 9 E QR+TAS Sbjct: 4 EELQRLTAS 12>XP_006721875 Length = 206 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ESTQRVTAS 9 E QR+TAS Sbjct: 34 EELQRLTAS 42>XP_005257264 Length = 206 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ESTQRVTAS 9 E QR+TAS Sbjct: 34 EELQRLTAS 42>NP_056469 Length = 207 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ESTQRVTAS 9 E QR+TAS Sbjct: 35 EELQRLTAS 43Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.286 0.0934 0.201 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 279,029 Number of extensions: 351 Number of successful extensions: 18 Number of sequences better than 10000.0: 18 Number of HSP's gapped: 18 Number of HSP's successfully gapped: 18 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.0 bits) S2: 28 (15.4 bits)
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |