Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000042 17 2528 XP_005271621 17 2528 XP_006718907 17 2528 XP_006718906 17 2528 XP_005271619 17 2528 XP_005271618 17 2528 NP_055973 15 9605 NP_001243805 15 9605 NP_694856 15 9605 NP_001243806 15 9605 XP_006716810 15 9605 XP_005251476 15 9605 XP_005251475 15 9605 XP_005251473 15 9605 XP_005251474 15 9605 XP_005251472 15 9605 XP_005251471 15 9605 XP_005251470 15 9605 XP_006716809 15 9605 XP_006716808 15 9605 XP_006716807 15 9605 XP_006716806 15 9605 XP_005251468 15 9605 XP_005251467 15 9605>NP_000042 Length = 3056 Score = 17.3 bits (33), Expect = 2528 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ESSQKSALL 9 ESSQKS LL Sbjct: 473 ESSQKSDLL 481>XP_005271621 Length = 2708 Score = 17.3 bits (33), Expect = 2528 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ESSQKSALL 9 ESSQKS LL Sbjct: 125 ESSQKSDLL 133>XP_006718907 Length = 3050 Score = 17.3 bits (33), Expect = 2528 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ESSQKSALL 9 ESSQKS LL Sbjct: 473 ESSQKSDLL 481>XP_006718906 Length = 3056 Score = 17.3 bits (33), Expect = 2528 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ESSQKSALL 9 ESSQKS LL Sbjct: 473 ESSQKSDLL 481>XP_005271619 Length = 3056 Score = 17.3 bits (33), Expect = 2528 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ESSQKSALL 9 ESSQKS LL Sbjct: 473 ESSQKSDLL 481>XP_005271618 Length = 3056 Score = 17.3 bits (33), Expect = 2528 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ESSQKSALL 9 ESSQKS LL Sbjct: 473 ESSQKSDLL 481>NP_055973 Length = 1352 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SSQKSAL 8 SSQKSA+ Sbjct: 1126 SSQKSAI 1132>NP_001243805 Length = 1352 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SSQKSAL 8 SSQKSA+ Sbjct: 1126 SSQKSAI 1132>NP_694856 Length = 1194 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SSQKSAL 8 SSQKSA+ Sbjct: 968 SSQKSAI 974>NP_001243806 Length = 1352 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SSQKSAL 8 SSQKSA+ Sbjct: 1126 SSQKSAI 1132>XP_006716810 Length = 1206 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SSQKSAL 8 SSQKSA+ Sbjct: 968 SSQKSAI 974>XP_005251476 Length = 1206 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SSQKSAL 8 SSQKSA+ Sbjct: 968 SSQKSAI 974>XP_005251475 Length = 1206 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SSQKSAL 8 SSQKSA+ Sbjct: 968 SSQKSAI 974>XP_005251473 Length = 1206 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SSQKSAL 8 SSQKSA+ Sbjct: 968 SSQKSAI 974>XP_005251474 Length = 1206 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SSQKSAL 8 SSQKSA+ Sbjct: 968 SSQKSAI 974>XP_005251472 Length = 1206 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SSQKSAL 8 SSQKSA+ Sbjct: 968 SSQKSAI 974>XP_005251471 Length = 1206 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SSQKSAL 8 SSQKSA+ Sbjct: 968 SSQKSAI 974>XP_005251470 Length = 1284 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SSQKSAL 8 SSQKSA+ Sbjct: 1046 SSQKSAI 1052>XP_006716809 Length = 1334 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SSQKSAL 8 SSQKSA+ Sbjct: 1108 SSQKSAI 1114>XP_006716808 Length = 1346 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SSQKSAL 8 SSQKSA+ Sbjct: 1108 SSQKSAI 1114>XP_006716807 Length = 1352 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SSQKSAL 8 SSQKSA+ Sbjct: 1126 SSQKSAI 1132>XP_006716806 Length = 1364 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SSQKSAL 8 SSQKSA+ Sbjct: 1126 SSQKSAI 1132>XP_005251468 Length = 1364 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SSQKSAL 8 SSQKSA+ Sbjct: 1126 SSQKSAI 1132>XP_005251467 Length = 1364 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SSQKSAL 8 SSQKSA+ Sbjct: 1126 SSQKSAI 1132Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.283 0.0990 0.202 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 228,108 Number of extensions: 198 Number of successful extensions: 24 Number of sequences better than 10000.0: 24 Number of HSP's gapped: 24 Number of HSP's successfully gapped: 24 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 18 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (14.8 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |