Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_444256 19 665 NP_444254 19 665 NP_444253 19 665 NP_444255 19 665 XP_005247551 19 665 XP_005247550 19 665 XP_006713712 19 665 XP_005247549 19 665 NP_002197 17 4312 NP_001138468 17 4312 NP_001138469 17 4312 NP_057412 17 4312 NP_001018098 17 4312 NP_060154 17 4312 NP_060550 17 4312 NP_065872 17 4312 NP_653234 17 4312 XP_005268907 17 4312 XP_005268906 17 4312 XP_005268905 17 4312 XP_005268904 17 4312 XP_005268903 17 4312 XP_005268902 17 4312 XP_005268901 17 4312 XP_005268899 17 4312 XP_005268898 17 4312 XP_005268897 17 4312 XP_005268896 17 4312 XP_006716247 17 4312 XP_005250778 17 4312 XP_006713027 17 4312 XP_006713026 17 4312 XP_006713025 17 4312 XP_006713024 17 4312 NP_940953 16 5631 XP_006711367 16 5631 XP_005273178 16 5631 XP_005244984 16 5631 NP_001257545 16 7355 NP_002754 16 7355 XP_006711518 16 7355 XP_005273252 16 7355 XP_005273253 16 7355 XP_005273251 16 7355 NP_828848 16 7355 NP_954635 15 9605 NP_000679 15 9605 NP_001231800 15 9605 NP_001334 15 9605 NP_003310 15 9605 NP_597676 15 9605 NP_001243779 15 9605 NP_596869 15 9605 NP_059509 15 9605 XP_005259084 15 9605 XP_006723316 15 9605 XP_005259653 15 9605 XP_005265002 15 9605 XP_005265001 15 9605 XP_005246888 15 9605 XP_006712788 15 9605 XP_006712787 15 9605 XP_006712786 15 9605 NP_060324 15 9605 NP_064555 15 9605 NP_001254479 15 9605 NP_597681 15 9605>NP_444256 Length = 1794 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ESQGTASAF 9 ESQGTA AF Sbjct: 1023 ESQGTAPAF 1031>NP_444254 Length = 1845 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ESQGTASAF 9 ESQGTA AF Sbjct: 1023 ESQGTAPAF 1031>NP_444253 Length = 1914 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ESQGTASAF 9 ESQGTA AF Sbjct: 1092 ESQGTAPAF 1100>NP_444255 Length = 1863 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ESQGTASAF 9 ESQGTA AF Sbjct: 1092 ESQGTAPAF 1100>XP_005247551 Length = 1855 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ESQGTASAF 9 ESQGTA AF Sbjct: 1033 ESQGTAPAF 1041>XP_005247550 Length = 1856 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ESQGTASAF 9 ESQGTA AF Sbjct: 1102 ESQGTAPAF 1110>XP_006713712 Length = 1923 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ESQGTASAF 9 ESQGTA AF Sbjct: 1102 ESQGTAPAF 1110>XP_005247549 Length = 1924 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ESQGTASAF 9 ESQGTA AF Sbjct: 1102 ESQGTAPAF 1110>NP_002197 Length = 1137 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 QGTASAF 9 QGTA+AF Sbjct: 199 QGTAAAF 205>NP_001138468 Length = 1141 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 QGTASAF 9 QGTA+AF Sbjct: 199 QGTAAAF 205>NP_001138469 Length = 1044 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 QGTASAF 9 QGTA+AF Sbjct: 102 QGTAAAF 108>NP_057412 Length = 959 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 ESQGTASA 8 +SQGTAS+ Sbjct: 653 DSQGTASS 660>NP_001018098 Length = 3628 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SQGTASAF 9 S+GTAS F Sbjct: 2407 SEGTASTF 2414>NP_060154 Length = 3710 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SQGTASAF 9 S+GTAS F Sbjct: 2364 SEGTASTF 2371>NP_060550 Length = 3585 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SQGTASAF 9 S+GTAS F Sbjct: 2364 SEGTASTF 2371>NP_065872 Length = 3753 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SQGTASAF 9 S+GTAS F Sbjct: 2407 SEGTASTF 2414>NP_653234 Length = 1107 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SQGTASAF 9 SQGT S+F Sbjct: 1056 SQGTVSSF 1063>XP_005268907 Length = 979 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 QGTASAF 9 QGTA+AF Sbjct: 41 QGTAAAF 47>XP_005268906 Length = 1023 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 QGTASAF 9 QGTA+AF Sbjct: 41 QGTAAAF 47>XP_005268905 Length = 1023 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 QGTASAF 9 QGTA+AF Sbjct: 41 QGTAAAF 47>XP_005268904 Length = 1023 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 QGTASAF 9 QGTA+AF Sbjct: 41 QGTAAAF 47>XP_005268903 Length = 1024 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 QGTASAF 9 QGTA+AF Sbjct: 86 QGTAAAF 92>XP_005268902 Length = 1024 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 QGTASAF 9 QGTA+AF Sbjct: 86 QGTAAAF 92>XP_005268901 Length = 1068 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 QGTASAF 9 QGTA+AF Sbjct: 86 QGTAAAF 92>XP_005268899 Length = 1131 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 QGTASAF 9 QGTA+AF Sbjct: 199 QGTAAAF 205>XP_005268898 Length = 1162 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 QGTASAF 9 QGTA+AF Sbjct: 199 QGTAAAF 205>XP_005268897 Length = 1175 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 QGTASAF 9 QGTA+AF Sbjct: 199 QGTAAAF 205>XP_005268896 Length = 1181 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 QGTASAF 9 QGTA+AF Sbjct: 199 QGTAAAF 205>XP_006716247 Length = 638 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 ESQGTASA 8 +SQGTAS+ Sbjct: 332 DSQGTASS 339>XP_005250778 Length = 805 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 ESQGTASA 8 +SQGTAS+ Sbjct: 653 DSQGTASS 660>XP_006713027 Length = 930 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SQGTASAF 9 SQGT S+F Sbjct: 879 SQGTVSSF 886>XP_006713026 Length = 986 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SQGTASAF 9 SQGT S+F Sbjct: 935 SQGTVSSF 942>XP_006713025 Length = 1089 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SQGTASAF 9 SQGT S+F Sbjct: 1038 SQGTVSSF 1045>XP_006713024 Length = 1108 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SQGTASAF 9 SQGT S+F Sbjct: 1057 SQGTVSSF 1064>NP_940953 Length = 1907 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 ESQGTASA 8 ESQG+A+A Sbjct: 890 ESQGSAAA 897>XP_006711367 Length = 1872 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 ESQGTASA 8 ESQG+A+A Sbjct: 890 ESQGSAAA 897>XP_005273178 Length = 1931 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 ESQGTASA 8 ESQG+A+A Sbjct: 890 ESQGSAAA 897>XP_005244984 Length = 496 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 ESQGTAS 7 ES+GTAS Sbjct: 441 ESEGTAS 447>NP_001257545 Length = 737 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 GTASAF 9 GTASAF Sbjct: 28 GTASAF 33>NP_002754 Length = 737 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 GTASAF 9 GTASAF Sbjct: 28 GTASAF 33>XP_006711518 Length = 680 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 GTASAF 9 GTASAF Sbjct: 28 GTASAF 33>XP_005273252 Length = 738 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 GTASAF 9 GTASAF Sbjct: 28 GTASAF 33>XP_005273253 Length = 738 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 GTASAF 9 GTASAF Sbjct: 28 GTASAF 33>XP_005273251 Length = 738 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 GTASAF 9 GTASAF Sbjct: 28 GTASAF 33>NP_828848 Length = 818 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 GTASAF 9 GTASAF Sbjct: 202 GTASAF 207>NP_954635 Length = 640 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 SQGTAS 7 SQGTAS Sbjct: 101 SQGTAS 106>NP_000679 Length = 640 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 SQGTAS 7 SQGTAS Sbjct: 101 SQGTAS 106>NP_001231800 Length = 749 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 SQGTASAF 9 S GT SAF Sbjct: 654 SSGTLSAF 661>NP_001334 Length = 770 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 SQGTASAF 9 S GT SAF Sbjct: 675 SSGTLSAF 682>NP_003310 Length = 26926 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 SQGTASAF 9 S GT SAF Sbjct: 16521 SSGTKSAF 16528>NP_597676 Length = 27051 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 SQGTASAF 9 S GT SAF Sbjct: 16646 SSGTKSAF 16653>NP_001243779 Length = 34350 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 SQGTASAF 9 S GT SAF Sbjct: 23945 SSGTKSAF 23952>NP_596869 Length = 33423 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 SQGTASAF 9 S GT SAF Sbjct: 23018 SSGTKSAF 23025>NP_059509 Length = 655 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 QGTASA 8 QGTASA Sbjct: 361 QGTASA 366>XP_005259084 Length = 99 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 ESQGTASA 8 E GTASA Sbjct: 80 EDDGTASA 87>XP_006723316 Length = 120 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 ESQGTASA 8 E GTASA Sbjct: 101 EDDGTASA 108>XP_005259653 Length = 562 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SQGTASA 8 SQG+ASA Sbjct: 165 SQGSASA 171>XP_005265002 Length = 640 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 SQGTAS 7 SQGTAS Sbjct: 101 SQGTAS 106>XP_005265001 Length = 657 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 SQGTAS 7 SQGTAS Sbjct: 118 SQGTAS 123>XP_005246888 Length = 22663 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 SQGTASAF 9 S GT SAF Sbjct: 12258 SSGTKSAF 12265>XP_006712788 Length = 24022 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 SQGTASAF 9 S GT SAF Sbjct: 13617 SSGTKSAF 13624>XP_006712787 Length = 33978 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 SQGTASAF 9 S GT SAF Sbjct: 23573 SSGTKSAF 23580>XP_006712786 Length = 35484 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 SQGTASAF 9 S GT SAF Sbjct: 25079 SSGTKSAF 25086>NP_060324 Length = 188 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 ESQGTASA 8 E GTASA Sbjct: 169 EDDGTASA 176>NP_064555 Length = 563 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SQGTASA 8 SQG+ASA Sbjct: 165 SQGSASA 171>NP_001254479 Length = 35991 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 SQGTASAF 9 S GT SAF Sbjct: 25586 SSGTKSAF 25593>NP_597681 Length = 27118 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 SQGTASAF 9 S GT SAF Sbjct: 16713 SSGTKSAF 16720Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.296 0.106 0.259 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 458,535 Number of extensions: 544 Number of successful extensions: 67 Number of sequences better than 10000.0: 67 Number of HSP's gapped: 67 Number of HSP's successfully gapped: 67 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.2 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |