Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001158238 18 1482 NP_008816 18 1482 XP_005256014 18 1482 NP_005119 18 1935 XP_006724131 18 1935 NP_000876 17 2528 NP_002099 16 5631 NP_038478 16 5631 NP_001245263 16 5631 NP_001276904 16 5631 NP_006112 16 5631 XP_005268878 16 5631 XP_006712537 16 5631 XP_006712536 16 5631 XP_005246557 16 5631 XP_006712535 16 5631 XP_006712534 16 5631 XP_006712533 16 5631 XP_006712532 16 5631 XP_006712531 16 5631 XP_006712530 16 5631 XP_006712529 16 5631 XP_006712528 16 5631 XP_006712527 16 5631 XP_005246549 16 5631 XP_006712526 16 5631 XP_006712525 16 5631 XP_005246546 16 5631 XP_006712524 16 5631 XP_005246545 16 5631 NP_062541 15 9605 NP_671494 15 9605 NP_006268 15 9605 NP_060009 15 9605 XP_006721125 15 9605>NP_001158238 Length = 2789 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 ESLVNLGES 9 E L+NLGES Sbjct: 11 EELMNLGES 19>NP_008816 Length = 3703 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 ESLVNLGES 9 E L+NLGES Sbjct: 925 EELMNLGES 933>XP_005256014 Length = 3702 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 ESLVNLGES 9 E L+NLGES Sbjct: 925 EELMNLGES 933>NP_005119 Length = 2298 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 ESLVNLGE 8 ESL+NLG+ Sbjct: 1421 ESLINLGQ 1428>XP_006724131 Length = 2298 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 ESLVNLGE 8 ESL+NLG+ Sbjct: 1421 ESLINLGQ 1428>NP_000876 Length = 1032 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 ESLVNLGE 8 ES+VNLG+ Sbjct: 370 ESIVNLGD 377>NP_002099 Length = 657 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ESLVNLGE 8 E LVNLG+ Sbjct: 124 EDLVNLGK 131>NP_038478 Length = 2168 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ESLVNLGES 9 E L+N+G+S Sbjct: 1123 EGLLNIGDS 1131>NP_001245263 Length = 591 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ESLVNLGE 8 E LVNLG+ Sbjct: 124 EDLVNLGK 131>NP_001276904 Length = 2132 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ESLVNLGES 9 E L+N+G+S Sbjct: 1087 EGLLNIGDS 1095>NP_006112 Length = 644 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 SLVNLGES 9 SLVNLG S Sbjct: 66 SLVNLGGS 73>XP_005268878 Length = 556 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ESLVNLGE 8 E LVNLG+ Sbjct: 124 EDLVNLGK 131>XP_006712537 Length = 1952 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ESLVNLGES 9 E L+N+G+S Sbjct: 1134 EGLLNIGDS 1142>XP_006712536 Length = 2082 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ESLVNLGES 9 E L+N+G+S Sbjct: 1002 EGLLNIGDS 1010>XP_005246557 Length = 2095 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ESLVNLGES 9 E L+N+G+S Sbjct: 1015 EGLLNIGDS 1023>XP_006712535 Length = 2095 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ESLVNLGES 9 E L+N+G+S Sbjct: 1015 EGLLNIGDS 1023>XP_006712534 Length = 2114 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ESLVNLGES 9 E L+N+G+S Sbjct: 1034 EGLLNIGDS 1042>XP_006712533 Length = 2116 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ESLVNLGES 9 E L+N+G+S Sbjct: 1036 EGLLNIGDS 1044>XP_006712532 Length = 2141 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ESLVNLGES 9 E L+N+G+S Sbjct: 1096 EGLLNIGDS 1104>XP_006712531 Length = 2169 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ESLVNLGES 9 E L+N+G+S Sbjct: 1089 EGLLNIGDS 1097>XP_006712530 Length = 2176 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ESLVNLGES 9 E L+N+G+S Sbjct: 1096 EGLLNIGDS 1104>XP_006712529 Length = 2179 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ESLVNLGES 9 E L+N+G+S Sbjct: 1134 EGLLNIGDS 1142>XP_006712528 Length = 2180 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ESLVNLGES 9 E L+N+G+S Sbjct: 1100 EGLLNIGDS 1108>XP_006712527 Length = 2203 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ESLVNLGES 9 E L+N+G+S Sbjct: 1123 EGLLNIGDS 1131>XP_005246549 Length = 2212 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ESLVNLGES 9 E L+N+G+S Sbjct: 1132 EGLLNIGDS 1140>XP_006712526 Length = 2212 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ESLVNLGES 9 E L+N+G+S Sbjct: 1132 EGLLNIGDS 1140>XP_006712525 Length = 2212 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ESLVNLGES 9 E L+N+G+S Sbjct: 1132 EGLLNIGDS 1140>XP_005246546 Length = 2214 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ESLVNLGES 9 E L+N+G+S Sbjct: 1134 EGLLNIGDS 1142>XP_006712524 Length = 2214 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ESLVNLGES 9 E L+N+G+S Sbjct: 1134 EGLLNIGDS 1142>XP_005246545 Length = 2214 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ESLVNLGES 9 E L+N+G+S Sbjct: 1134 EGLLNIGDS 1142>NP_062541 Length = 1670 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ESLVNLGES 9 +SL++LG S Sbjct: 209 QSLIDLGSS 217>NP_671494 Length = 1249 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ESLVNLGES 9 +SL++LG S Sbjct: 209 QSLIDLGSS 217>NP_006268 Length = 1697 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ESLVNLGES 9 +SL++LG S Sbjct: 209 QSLIDLGSS 217>NP_060009 Length = 4116 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SLVNLGES 9 SL+NLG + Sbjct: 3893 SLINLGRA 3900>XP_006721125 Length = 4070 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SLVNLGES 9 SL+NLG + Sbjct: 3847 SLINLGRA 3854Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.292 0.120 0.283 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 496,561 Number of extensions: 938 Number of successful extensions: 35 Number of sequences better than 10000.0: 35 Number of HSP's gapped: 35 Number of HSP's successfully gapped: 35 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (14.8 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |