Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001268421 19 869 NP_000170 19 869 NP_001268422 19 869 NP_001268423 19 869 XP_005264328 19 869 NP_001371 16 7355 NP_001277152 16 7355 NP_001277131 16 7355 NP_849191 16 7355 NP_001092105 16 7355 NP_998771 16 7355 NP_056392 16 7355 NP_001138997 16 7355 NP_001138995 16 7355 NP_001138994 16 7355 NP_001138993 16 7355 NP_001138992 16 7355 XP_006714532 16 7355 NP_115511 16 7355 NP_001136277 15 9605 NP_005620 15 9605 NP_055043 15 9605 NP_001269665 15 9605 NP_001020016 15 9605 NP_001139807 15 9605 NP_060527 15 9605 NP_116201 15 9605 NP_877499 15 9605 NP_964012 15 9605 NP_008865 15 9605 NP_001248309 15 9605 XP_006713311 15 9605 XP_006713310 15 9605 XP_005264819 15 9605 XP_006713309 15 9605 XP_006710903 15 9605 XP_006710057 15 9605 NP_001139669 15 9605>NP_001268421 Length = 1230 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ESIFFVELS 9 ES FFVELS Sbjct: 1057 ESTFFVELS 1065>NP_000170 Length = 1360 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ESIFFVELS 9 ES FFVELS Sbjct: 1187 ESTFFVELS 1195>NP_001268422 Length = 1058 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ESIFFVELS 9 ES FFVELS Sbjct: 885 ESTFFVELS 893>NP_001268423 Length = 1058 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ESIFFVELS 9 ES FFVELS Sbjct: 885 ESTFFVELS 893>XP_005264328 Length = 1261 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ESIFFVELS 9 ES FFVELS Sbjct: 1088 ESTFFVELS 1096>NP_001371 Length = 1865 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ESIFFVELS 9 +S+F VE+S Sbjct: 1480 KSVFMVEIS 1488>NP_001277152 Length = 1886 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ESIFFVELS 9 +S+F VE+S Sbjct: 1501 KSVFMVEIS 1509>NP_001277131 Length = 869 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 FFVELS 9 FFVELS Sbjct: 380 FFVELS 385>NP_849191 Length = 994 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 FFVELS 9 FFVELS Sbjct: 505 FFVELS 510>NP_001092105 Length = 993 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 FFVELS 9 FFVELS Sbjct: 505 FFVELS 510>NP_998771 Length = 516 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 SIFFVE 7 SIFFVE Sbjct: 70 SIFFVE 75>NP_056392 Length = 980 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 ESIFFVE 7 ES+FF E Sbjct: 303 ESVFFAE 309>NP_001138997 Length = 983 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 ESIFFVE 7 ES+FF E Sbjct: 306 ESVFFAE 312>NP_001138995 Length = 972 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 ESIFFVE 7 ES+FF E Sbjct: 295 ESVFFAE 301>NP_001138994 Length = 951 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 ESIFFVE 7 ES+FF E Sbjct: 274 ESVFFAE 280>NP_001138993 Length = 980 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 ESIFFVE 7 ES+FF E Sbjct: 303 ESVFFAE 309>NP_001138992 Length = 980 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 ESIFFVE 7 ES+FF E Sbjct: 303 ESVFFAE 309>XP_006714532 Length = 980 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 ESIFFVE 7 ES+FF E Sbjct: 303 ESVFFAE 309>NP_115511 Length = 825 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 ESIFFVEL 8 ES+F +EL Sbjct: 811 ESVFHIEL 818>NP_001136277 Length = 625 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 IFFVELS 9 IFF+E+S Sbjct: 105 IFFLEIS 111>NP_005620 Length = 635 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 IFFVELS 9 IFF+E+S Sbjct: 105 IFFLEIS 111>NP_055043 Length = 636 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 IFFVELS 9 +FF+ELS Sbjct: 90 LFFLELS 96>NP_001269665 Length = 480 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 SIFFVE 7 SIFF+E Sbjct: 437 SIFFIE 442>NP_001020016 Length = 633 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 IFFVELS 9 +FF+ELS Sbjct: 80 LFFMELS 86>NP_001139807 Length = 623 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 IFFVELS 9 +FF+ELS Sbjct: 7 LFFLELS 13>NP_060527 Length = 289 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 IFFVELS 9 +FF+ELS Sbjct: 114 LFFLELS 120>NP_116201 Length = 529 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 SIFFVE 7 SIFF+E Sbjct: 486 SIFFIE 491>NP_877499 Length = 730 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 IFFVELS 9 +FF+ELS Sbjct: 114 LFFLELS 120>NP_964012 Length = 706 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 IFFVELS 9 +FF+ELS Sbjct: 153 LFFMELS 159>NP_008865 Length = 652 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 IFFVELS 9 +FF+ELS Sbjct: 99 LFFMELS 105>NP_001248309 Length = 637 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 IFFVELS 9 +FF+ELS Sbjct: 84 LFFMELS 90>XP_006713311 Length = 939 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SIFFVELS 9 SIFF+E S Sbjct: 185 SIFFLERS 192>XP_006713310 Length = 1038 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SIFFVELS 9 SIFF+E S Sbjct: 284 SIFFLERS 291>XP_005264819 Length = 1128 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SIFFVELS 9 SIFF+E S Sbjct: 397 SIFFLERS 404>XP_006713309 Length = 1151 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SIFFVELS 9 SIFF+E S Sbjct: 397 SIFFLERS 404>XP_006710903 Length = 649 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 IFFVELS 9 +FF+ELS Sbjct: 153 LFFMELS 159>XP_006710057 Length = 99 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 IFFVELS 9 IFF+E+S Sbjct: 47 IFFLEIS 53>NP_001139669 Length = 7081 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 ESIFFVEL 8 ++IFF EL Sbjct: 3001 QNIFFTEL 3008Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.328 0.144 0.361 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 320,139 Number of extensions: 247 Number of successful extensions: 38 Number of sequences better than 10000.0: 38 Number of HSP's gapped: 38 Number of HSP's successfully gapped: 38 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.1 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |