Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_008835 19 665 NP_001075109 19 665 NP_597677 18 1935 NP_056199 18 1935 XP_005248339 18 1935 XP_005248337 18 1935 XP_006714531 18 1935 XP_006714530 18 1935 NP_037523 17 4312 XP_006714661 17 4312 XP_006714660 17 4312 NP_982272 16 5631 NP_001177387 16 5631 NP_001180465 16 5631 NP_056100 16 5631 NP_443066 16 5631 XP_005266731 16 5631 XP_006722494 16 5631 NP_085126 16 7355 NP_001136116 16 7355 XP_006712841 16 7355 XP_006712840 16 7355 NP_001275929 15 9605 NP_001275930 15 9605 NP_705837 15 9605 NP_055504 15 9605 NP_001277192 15 9605 XP_006724226 15 9605 XP_006724225 15 9605 XP_006712687 15 9605 XP_006712686 15 9605 XP_006712685 15 9605 XP_006712684 15 9605 XP_006712683 15 9605 XP_006712682 15 9605 XP_006712681 15 9605 XP_005246730 15 9605 XP_005246729 15 9605 XP_006712680 15 9605 XP_006712679 15 9605 NP_113689 15 9605 NP_061731 15 9605>NP_008835 Length = 4128 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 ESIAMYDII 9 ESIAM+DII Sbjct: 1299 ESIAMHDII 1307>NP_001075109 Length = 4097 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 ESIAMYDII 9 ESIAM+DII Sbjct: 1299 ESIAMHDII 1307>NP_597677 Length = 2804 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 ESIAMYDII 9 E AMYDII Sbjct: 340 EKAAMYDII 348>NP_056199 Length = 2697 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 ESIAMYDII 9 E AMYDII Sbjct: 340 EKAAMYDII 348>XP_005248339 Length = 2584 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 ESIAMYDII 9 E AMYDII Sbjct: 120 EKAAMYDII 128>XP_005248337 Length = 2698 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 ESIAMYDII 9 E AMYDII Sbjct: 340 EKAAMYDII 348>XP_006714531 Length = 2738 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 ESIAMYDII 9 E AMYDII Sbjct: 340 EKAAMYDII 348>XP_006714530 Length = 2755 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 ESIAMYDII 9 E AMYDII Sbjct: 340 EKAAMYDII 348>NP_037523 Length = 866 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ESIAMYDII 9 +S+A+YD I Sbjct: 690 DSVALYDAI 698>XP_006714661 Length = 486 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ESIAMYDII 9 +S+A+YD I Sbjct: 310 DSVALYDAI 318>XP_006714660 Length = 774 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ESIAMYDII 9 +S+A+YD I Sbjct: 690 DSVALYDAI 698>NP_982272 Length = 2099 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 SIAMYDI 8 SIA+YD+ Sbjct: 287 SIALYDV 293>NP_001177387 Length = 1999 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 SIAMYDI 8 SIA+YD+ Sbjct: 219 SIALYDV 225>NP_001180465 Length = 2031 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 SIAMYDI 8 SIA+YD+ Sbjct: 219 SIALYDV 225>NP_056100 Length = 1490 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 SIAMYDI 8 S+A+YDI Sbjct: 1376 SVALYDI 1382>NP_443066 Length = 1457 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 SIAMYDI 8 S+A+YDI Sbjct: 1343 SVALYDI 1349>XP_005266731 Length = 982 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 SIAMYDI 8 S+A+YDI Sbjct: 868 SVALYDI 874>XP_006722494 Length = 1490 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 SIAMYDI 8 S+A+YDI Sbjct: 1376 SVALYDI 1382>NP_085126 Length = 1671 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 ESIAMYDII 9 ES MYD++ Sbjct: 14 ESSRMYDVL 22>NP_001136116 Length = 1700 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 ESIAMYDII 9 ES MYD++ Sbjct: 14 ESSRMYDVL 22>XP_006712841 Length = 1696 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 ESIAMYDII 9 ES MYD++ Sbjct: 39 ESSRMYDVL 47>XP_006712840 Length = 1725 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 ESIAMYDII 9 ES MYD++ Sbjct: 39 ESSRMYDVL 47>NP_001275929 Length = 824 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 ESIAMYDI 8 + +AMYD+ Sbjct: 261 DRLAMYDV 268>NP_001275930 Length = 802 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 ESIAMYDI 8 + +AMYD+ Sbjct: 261 DRLAMYDV 268>NP_705837 Length = 811 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 ESIAMYDI 8 + +AMYD+ Sbjct: 270 DRLAMYDV 277>NP_055504 Length = 2186 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 SIAMYDI 8 S+A+YD+ Sbjct: 426 SVALYDL 432>NP_001277192 Length = 2180 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 SIAMYDI 8 S+A+YD+ Sbjct: 420 SVALYDL 426>XP_006724226 Length = 802 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 ESIAMYDI 8 + +AMYD+ Sbjct: 261 DRLAMYDV 268>XP_006724225 Length = 802 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 ESIAMYDI 8 + +AMYD+ Sbjct: 261 DRLAMYDV 268>XP_006712687 Length = 2166 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 SIAMYDI 8 S+A+YD+ Sbjct: 439 SVALYDL 445>XP_006712686 Length = 2173 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 SIAMYDI 8 S+A+YD+ Sbjct: 439 SVALYDL 445>XP_006712685 Length = 2175 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 SIAMYDI 8 S+A+YD+ Sbjct: 439 SVALYDL 445>XP_006712684 Length = 2189 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 SIAMYDI 8 S+A+YD+ Sbjct: 420 SVALYDL 426>XP_006712683 Length = 2195 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 SIAMYDI 8 S+A+YD+ Sbjct: 426 SVALYDL 432>XP_006712682 Length = 2199 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 SIAMYDI 8 S+A+YD+ Sbjct: 439 SVALYDL 445>XP_006712681 Length = 2199 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 SIAMYDI 8 S+A+YD+ Sbjct: 439 SVALYDL 445>XP_005246730 Length = 2199 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 SIAMYDI 8 S+A+YD+ Sbjct: 439 SVALYDL 445>XP_005246729 Length = 2201 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 SIAMYDI 8 S+A+YD+ Sbjct: 439 SVALYDL 445>XP_006712680 Length = 2206 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 SIAMYDI 8 S+A+YD+ Sbjct: 439 SVALYDL 445>XP_006712679 Length = 2208 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 SIAMYDI 8 S+A+YD+ Sbjct: 439 SVALYDL 445>NP_113689 Length = 816 Score = 15.4 bits (28), Expect = 9605 Identities = 3/9 (33%), Positives = 9/9 (100%) Query: 1 ESIAMYDII 9 ES+++Y+++ Sbjct: 415 ESVSVYELV 423>NP_061731 Length = 936 Score = 15.4 bits (28), Expect = 9605 Identities = 3/9 (33%), Positives = 9/9 (100%) Query: 1 ESIAMYDII 9 ES+++Y+++ Sbjct: 415 ESVSVYELV 423Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.327 0.142 0.362 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 364,792 Number of extensions: 425 Number of successful extensions: 42 Number of sequences better than 10000.0: 42 Number of HSP's gapped: 42 Number of HSP's successfully gapped: 42 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.0 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |