Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_444256 19 869 NP_444254 19 869 NP_444253 19 869 NP_444255 19 869 XP_005247551 19 869 XP_005247550 19 869 XP_006713712 19 869 XP_005247549 19 869 NP_851996 16 5631 NP_001229537 16 5631 NP_001070150 16 5631 NP_001229536 16 5631 NP_000606 16 5631 NP_004420 16 7355 NP_005042 16 7355 NP_001259002 16 7355 NP_004506 16 7355 NP_001254738 16 7355 NP_001071107 15 9605 NP_060148 15 9605 XP_005259057 15 9605 XP_005259056 15 9605 XP_006723307 15 9605 XP_005259055 15 9605 NP_059128 15 9605>NP_444256 Length = 1794 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ESDATVKMK 9 ESDATVK K Sbjct: 1148 ESDATVKKK 1156>NP_444254 Length = 1845 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ESDATVKMK 9 ESDATVK K Sbjct: 1148 ESDATVKKK 1156>NP_444253 Length = 1914 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ESDATVKMK 9 ESDATVK K Sbjct: 1217 ESDATVKKK 1225>NP_444255 Length = 1863 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ESDATVKMK 9 ESDATVK K Sbjct: 1217 ESDATVKKK 1225>XP_005247551 Length = 1855 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ESDATVKMK 9 ESDATVK K Sbjct: 1158 ESDATVKKK 1166>XP_005247550 Length = 1856 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ESDATVKMK 9 ESDATVK K Sbjct: 1227 ESDATVKKK 1235>XP_006713712 Length = 1923 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ESDATVKMK 9 ESDATVK K Sbjct: 1227 ESDATVKKK 1235>XP_005247549 Length = 1924 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ESDATVKMK 9 ESDATVK K Sbjct: 1227 ESDATVKKK 1235>NP_851996 Length = 858 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ESDATVKMK 9 ES+ATV +K Sbjct: 105 ESEATVNVK 113Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 ESDATVKMK 9 E DAT+ +K Sbjct: 295 EQDATIHLK 303>NP_001229537 Length = 726 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ESDATVKMK 9 ES+ATV +K Sbjct: 105 ESEATVNVK 113Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 ESDATVKMK 9 E DAT+ +K Sbjct: 295 EQDATIHLK 303>NP_001070150 Length = 761 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ESDATVKMK 9 ES+ATV +K Sbjct: 105 ESEATVNVK 113Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 ESDATVKMK 9 E DAT+ +K Sbjct: 295 EQDATIHLK 303>NP_001229536 Length = 884 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ESDATVKMK 9 ES+ATV +K Sbjct: 105 ESEATVNVK 113Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 ESDATVKMK 9 E DAT+ +K Sbjct: 295 EQDATIHLK 303>NP_000606 Length = 848 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ESDATVKMK 9 ES+ATV +K Sbjct: 105 ESEATVNVK 113Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 ESDATVKMK 9 E DAT+ +K Sbjct: 295 EQDATIHLK 303>NP_004420 Length = 346 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ESDATVKM 8 E+D TVKM Sbjct: 184 EADNTVKM 191>NP_005042 Length = 775 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ESDATVKMK 9 E +AT++MK Sbjct: 397 EGEATLRMK 405>NP_001259002 Length = 764 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ESDATVKMK 9 E +AT++MK Sbjct: 386 EGEATLRMK 394>NP_004506 Length = 390 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SDATVKM 8 SDATVK+ Sbjct: 169 SDATVKI 175>NP_001254738 Length = 352 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SDATVKM 8 SDATVK+ Sbjct: 131 SDATVKI 137>NP_001071107 Length = 544 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 ATVKMK 9 ATVKMK Sbjct: 333 ATVKMK 338>NP_060148 Length = 260 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 ATVKMK 9 ATVKMK Sbjct: 49 ATVKMK 54>XP_005259057 Length = 416 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SDATVKMK 9 SD+T K+K Sbjct: 109 SDSTAKLK 116>XP_005259056 Length = 416 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SDATVKMK 9 SD+T K+K Sbjct: 109 SDSTAKLK 116>XP_006723307 Length = 431 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SDATVKMK 9 SD+T K+K Sbjct: 124 SDSTAKLK 131>XP_005259055 Length = 431 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SDATVKMK 9 SD+T K+K Sbjct: 124 SDSTAKLK 131>NP_059128 Length = 416 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SDATVKMK 9 SD+T K+K Sbjct: 109 SDSTAKLK 116Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.293 0.106 0.242 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 428,745 Number of extensions: 787 Number of successful extensions: 30 Number of sequences better than 10000.0: 25 Number of HSP's gapped: 30 Number of HSP's successfully gapped: 30 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.1 bits) S2: 28 (15.4 bits)
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |