Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_443179 18 1482 NP_036222 17 3301 XP_006710603 17 3301 XP_006710602 17 3301 XP_006710600 17 3301 XP_005270757 17 3301 XP_006710599 17 3301 XP_006710598 17 3301 XP_006710597 17 3301 XP_006710596 17 3301 XP_006710595 17 3301 XP_006710594 17 3301 XP_006710593 17 3301 XP_006710592 17 3301 XP_006710591 17 3301 XP_006710590 17 3301 XP_006710589 17 3301 XP_006710588 17 3301 XP_006710587 17 3301 XP_006710586 17 3301 XP_006710585 17 3301 XP_005270755 17 3301 XP_006710584 17 3301 XP_005270754 17 3301 XP_005270753 17 3301 XP_006710583 17 3301 XP_005270752 17 3301 XP_006710582 17 3301 XP_005270751 17 3301 NP_872114 15 9605 NP_006366 15 9605 NP_001268665 15 9605 XP_005262411 15 9605>NP_443179 Length = 2170 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ESAISTQAE 9 E AISTQAE Sbjct: 601 ECAISTQAE 609>NP_036222 Length = 5430 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 ESAISTQAE 9 +SAISTQ E Sbjct: 2647 QSAISTQPE 2655>XP_006710603 Length = 5324 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 ESAISTQAE 9 +SAISTQ E Sbjct: 2647 QSAISTQPE 2655>XP_006710602 Length = 7391 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 ESAISTQAE 9 +SAISTQ E Sbjct: 4714 QSAISTQPE 4722>XP_006710600 Length = 5384 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 ESAISTQAE 9 +SAISTQ E Sbjct: 2647 QSAISTQPE 2655>XP_005270757 Length = 5460 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 ESAISTQAE 9 +SAISTQ E Sbjct: 2786 QSAISTQPE 2794>XP_006710599 Length = 5656 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 ESAISTQAE 9 +SAISTQ E Sbjct: 2807 QSAISTQPE 2815>XP_006710598 Length = 7553 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 ESAISTQAE 9 +SAISTQ E Sbjct: 4704 QSAISTQPE 4712>XP_006710597 Length = 7451 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 ESAISTQAE 9 +SAISTQ E Sbjct: 4714 QSAISTQPE 4722>XP_006710596 Length = 7512 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 ESAISTQAE 9 +SAISTQ E Sbjct: 4663 QSAISTQPE 4671>XP_006710595 Length = 7526 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 ESAISTQAE 9 +SAISTQ E Sbjct: 4677 QSAISTQPE 4685>XP_006710594 Length = 7528 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 ESAISTQAE 9 +SAISTQ E Sbjct: 4679 QSAISTQPE 4687>XP_006710593 Length = 7539 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 ESAISTQAE 9 +SAISTQ E Sbjct: 4690 QSAISTQPE 4698>XP_006710592 Length = 7544 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 ESAISTQAE 9 +SAISTQ E Sbjct: 4695 QSAISTQPE 4703>XP_006710591 Length = 7558 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 ESAISTQAE 9 +SAISTQ E Sbjct: 4709 QSAISTQPE 4717>XP_006710590 Length = 7563 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 ESAISTQAE 9 +SAISTQ E Sbjct: 4714 QSAISTQPE 4722>XP_006710589 Length = 7595 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 ESAISTQAE 9 +SAISTQ E Sbjct: 4746 QSAISTQPE 4754>XP_006710588 Length = 7614 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 ESAISTQAE 9 +SAISTQ E Sbjct: 4874 QSAISTQPE 4882>XP_006710587 Length = 7645 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 ESAISTQAE 9 +SAISTQ E Sbjct: 4796 QSAISTQPE 4804>XP_006710586 Length = 7645 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 ESAISTQAE 9 +SAISTQ E Sbjct: 4874 QSAISTQPE 4882>XP_006710585 Length = 7657 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 ESAISTQAE 9 +SAISTQ E Sbjct: 4874 QSAISTQPE 4882>XP_005270755 Length = 7663 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 ESAISTQAE 9 +SAISTQ E Sbjct: 4874 QSAISTQPE 4882>XP_006710584 Length = 7686 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 ESAISTQAE 9 +SAISTQ E Sbjct: 4874 QSAISTQPE 4882>XP_005270754 Length = 7694 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 ESAISTQAE 9 +SAISTQ E Sbjct: 4874 QSAISTQPE 4882>XP_005270753 Length = 7700 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 ESAISTQAE 9 +SAISTQ E Sbjct: 4874 QSAISTQPE 4882>XP_006710583 Length = 7702 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 ESAISTQAE 9 +SAISTQ E Sbjct: 4853 QSAISTQPE 4861>XP_005270752 Length = 7717 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 ESAISTQAE 9 +SAISTQ E Sbjct: 4874 QSAISTQPE 4882>XP_006710582 Length = 7720 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 ESAISTQAE 9 +SAISTQ E Sbjct: 4874 QSAISTQPE 4882>XP_005270751 Length = 7723 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 ESAISTQAE 9 +SAISTQ E Sbjct: 4874 QSAISTQPE 4882>NP_872114 Length = 610 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ESAISTQAE 9 ESA+ +QAE Sbjct: 404 ESALVSQAE 412>NP_006366 Length = 581 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ESAISTQAE 9 ESA+ +QAE Sbjct: 375 ESALVSQAE 383>NP_001268665 Length = 581 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ESAISTQAE 9 ESA+ +QAE Sbjct: 375 ESALVSQAE 383>XP_005262411 Length = 610 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ESAISTQAE 9 ESA+ +QAE Sbjct: 404 ESALVSQAE 412Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.276 0.0911 0.186 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 236,663 Number of extensions: 218 Number of successful extensions: 33 Number of sequences better than 10000.0: 33 Number of HSP's gapped: 33 Number of HSP's successfully gapped: 33 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 18 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (14.6 bits) S2: 28 (15.4 bits)
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |