Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_002430 19 869 NP_000734 17 3301 NP_001160166 17 3301 NP_775790 17 3301 XP_006720445 17 3301 XP_005274275 17 3301 XP_005274273 17 3301 XP_006718743 17 3301 XP_006718742 17 3301 XP_006718741 17 3301 XP_006718740 17 3301 XP_006718739 17 3301 XP_005251234 17 3301 XP_005251233 17 3301 NP_056197 17 4312 NP_001010852 17 4312 XP_005267560 17 4312 XP_005267559 17 4312 NP_006539 16 5631 NP_001007226 16 5631 XP_006713541 16 5631 XP_006713540 16 5631 XP_005263735 16 7355 NP_002114 15 9605 NP_001104262 15 9605 NP_001230890 15 9605 NP_004983 15 9605 NP_002215 15 9605 NP_055847 15 9605 NP_733749 15 9605 NP_001139676 15 9605 NP_001139675 15 9605 XP_006724882 15 9605 XP_005274740 15 9605 XP_005274739 15 9605 XP_005274738 15 9605 XP_006722716 15 9605 XP_005259563 15 9605 XP_005259562 15 9605 XP_005266355 15 9605 XP_005266354 15 9605 XP_005266353 15 9605 XP_005266352 15 9605 XP_006715154 15 9605 NP_001139674 15 9605 NP_689695 15 9605>NP_002430 Length = 1137 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ERVMIITRP 9 ERVMIIT P Sbjct: 889 ERVMIITGP 897>NP_000734 Length = 505 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RVMIITRP 9 RVM +TRP Sbjct: 352 RVMFMTRP 359>NP_001160166 Length = 489 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RVMIITRP 9 RVM +TRP Sbjct: 352 RVMFMTRP 359>NP_775790 Length = 354 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 RVMIITRP 9 R MIITRP Sbjct: 57 RDMIITRP 64>XP_006720445 Length = 438 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RVMIITRP 9 RVM +TRP Sbjct: 285 RVMFMTRP 292>XP_005274275 Length = 329 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ERVMIITRP 9 ER+M+I RP Sbjct: 261 ERMMMILRP 269>XP_005274273 Length = 375 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ERVMIITRP 9 ER+M+I RP Sbjct: 307 ERMMMILRP 315>XP_006718743 Length = 575 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ERVMIITRP 9 ER+M+I RP Sbjct: 261 ERMMMILRP 269>XP_006718742 Length = 575 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ERVMIITRP 9 ER+M+I RP Sbjct: 261 ERMMMILRP 269>XP_006718741 Length = 602 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ERVMIITRP 9 ER+M+I RP Sbjct: 367 ERMMMILRP 375>XP_006718740 Length = 621 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ERVMIITRP 9 ER+M+I RP Sbjct: 307 ERMMMILRP 315>XP_006718739 Length = 681 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ERVMIITRP 9 ER+M+I RP Sbjct: 367 ERMMMILRP 375>XP_005251234 Length = 317 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 RVMIITRP 9 R MIITRP Sbjct: 57 RDMIITRP 64>XP_005251233 Length = 354 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 RVMIITRP 9 R MIITRP Sbjct: 57 RDMIITRP 64>NP_056197 Length = 2610 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ERVMIITRP 9 E VMI+ RP Sbjct: 1702 EEVMILRRP 1710>NP_001010852 Length = 327 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RVMIITRP 9 R M+ITRP Sbjct: 35 RDMVITRP 42>XP_005267560 Length = 2563 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ERVMIITRP 9 E VMI+ RP Sbjct: 1655 EEVMILRRP 1663>XP_005267559 Length = 2610 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ERVMIITRP 9 E VMI+ RP Sbjct: 1702 EEVMILRRP 1710>NP_006539 Length = 599 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ERVMIITRP 9 ER++IIT P Sbjct: 473 ERMVIITGP 481>NP_001007226 Length = 556 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ERVMIITRP 9 ER++IIT P Sbjct: 430 ERMVIITGP 438>XP_006713541 Length = 300 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ERVMIITRP 9 ER++IIT P Sbjct: 174 ERMVIITGP 182>XP_006713540 Length = 343 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ERVMIITRP 9 ER++IIT P Sbjct: 217 ERMVIITGP 225>XP_005263735 Length = 686 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 RVMIITRP 9 ++M+IT P Sbjct: 676 KIMVITNP 683>NP_002114 Length = 261 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 ERVMIITR 8 ERV ++TR Sbjct: 54 ERVRLVTR 61>NP_001104262 Length = 498 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RVMIITRP 9 +VM+I RP Sbjct: 256 QVMVIKRP 263>NP_001230890 Length = 269 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 ERVMIITR 8 ERV ++TR Sbjct: 54 ERVRLVTR 61>NP_004983 Length = 486 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RVMIITRP 9 +VM+I RP Sbjct: 244 QVMVIKRP 251>NP_002215 Length = 2671 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 ERVMIITRP 9 ER++I RP Sbjct: 2014 ERILISLRP 2022>NP_055847 Length = 1447 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 RVMIITR 8 +VM+ITR Sbjct: 528 KVMVITR 534>NP_733749 Length = 673 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 RVMIITRP 9 +VM+++RP Sbjct: 255 QVMVLSRP 262>NP_001139676 Length = 604 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 RVMIITRP 9 +VM+++RP Sbjct: 255 QVMVLSRP 262>NP_001139675 Length = 581 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 RVMIITRP 9 +VM+++RP Sbjct: 255 QVMVLSRP 262>XP_006724882 Length = 263 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RVMIITRP 9 +VM+I RP Sbjct: 21 QVMVIKRP 28>XP_005274740 Length = 393 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RVMIITRP 9 +VM+I RP Sbjct: 151 QVMVIKRP 158>XP_005274739 Length = 393 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RVMIITRP 9 +VM+I RP Sbjct: 151 QVMVIKRP 158>XP_005274738 Length = 486 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RVMIITRP 9 +VM+I RP Sbjct: 244 QVMVIKRP 251>XP_006722716 Length = 118 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ERVMIITRP 9 +RV++ TRP Sbjct: 7 KRVLLPTRP 15>XP_005259563 Length = 118 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ERVMIITRP 9 +RV++ TRP Sbjct: 7 KRVLLPTRP 15>XP_005259562 Length = 161 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ERVMIITRP 9 +RV++ TRP Sbjct: 50 KRVLLPTRP 58>XP_005266355 Length = 1448 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 RVMIITR 8 +VM+ITR Sbjct: 528 KVMVITR 534>XP_005266354 Length = 1411 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 RVMIITR 8 +VM+ITR Sbjct: 528 KVMVITR 534>XP_005266353 Length = 1445 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 RVMIITR 8 +VM+ITR Sbjct: 528 KVMVITR 534>XP_005266352 Length = 1446 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 RVMIITR 8 +VM+ITR Sbjct: 528 KVMVITR 534>XP_006715154 Length = 2700 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 ERVMIITRP 9 ER++I RP Sbjct: 2043 ERILISLRP 2051>NP_001139674 Length = 659 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 RVMIITRP 9 +VM+++RP Sbjct: 241 QVMVLSRP 248>NP_689695 Length = 118 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ERVMIITRP 9 +RV++ TRP Sbjct: 7 KRVLLPTRP 15Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.335 0.146 0.408 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 423,286 Number of extensions: 927 Number of successful extensions: 46 Number of sequences better than 10000.0: 46 Number of HSP's gapped: 46 Number of HSP's successfully gapped: 46 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.3 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |