Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_570711 21 229 NP_570712 21 229 NP_570714 21 229 NP_570713 21 229 NP_570716 21 229 NP_000235 21 229 NP_570715 21 229 XP_006718620 21 229 XP_005274059 21 229 XP_005274060 21 229 XP_005274058 21 229 XP_005276387 18 1482 XP_005272420 18 1482 XP_005276080 18 1482 XP_005250117 17 3301 NP_003583 17 3301 NP_009049 16 5631 NP_001157576 16 5631 NP_001157577 16 5631 NP_061868 16 5631 NP_203751 16 5631 XP_006725221 16 5631 XP_006724481 16 5631 XP_005261980 16 5631 XP_006714558 16 5631 XP_006714456 16 5631 XP_005263376 16 5631 NP_002302 16 7355 NP_057057 16 7355 NP_874362 16 7355 XP_006721959 16 7355 XP_006718643 16 7355 NP_079042 15 9605 NP_004553 15 9605 NP_054642 15 9605 NP_003986 15 9605 NP_000897 15 9605 NP_001269616 15 9605 NP_056492 15 9605 NP_001153069 15 9605 NP_060598 15 9605 NP_001073949 15 9605 NP_001269611 15 9605 XP_005251536 15 9605 XP_006716841 15 9605 XP_005251535 15 9605 XP_006715062 15 9605 XP_005264624 15 9605 XP_005245275 15 9605 XP_006711406 15 9605 XP_006711405 15 9605 NP_003384 15 9605>NP_570711 Length = 610 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 ERRGQTVNA 9 +RRGQTVNA Sbjct: 205 DRRGQTVNA 213>NP_570712 Length = 615 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 ERRGQTVNA 9 +RRGQTVNA Sbjct: 210 DRRGQTVNA 218>NP_570714 Length = 615 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 ERRGQTVNA 9 +RRGQTVNA Sbjct: 210 DRRGQTVNA 218>NP_570713 Length = 615 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 ERRGQTVNA 9 +RRGQTVNA Sbjct: 210 DRRGQTVNA 218>NP_570716 Length = 615 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 ERRGQTVNA 9 +RRGQTVNA Sbjct: 210 DRRGQTVNA 218>NP_000235 Length = 615 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 ERRGQTVNA 9 +RRGQTVNA Sbjct: 210 DRRGQTVNA 218>NP_570715 Length = 615 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 ERRGQTVNA 9 +RRGQTVNA Sbjct: 210 DRRGQTVNA 218>XP_006718620 Length = 610 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 ERRGQTVNA 9 +RRGQTVNA Sbjct: 205 DRRGQTVNA 213>XP_005274059 Length = 610 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 ERRGQTVNA 9 +RRGQTVNA Sbjct: 205 DRRGQTVNA 213>XP_005274060 Length = 610 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 ERRGQTVNA 9 +RRGQTVNA Sbjct: 205 DRRGQTVNA 213>XP_005274058 Length = 610 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 ERRGQTVNA 9 +RRGQTVNA Sbjct: 205 DRRGQTVNA 213>XP_005276387 Length = 262 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 ERRGQTVNA 9 ERR QT NA Sbjct: 25 ERRAQTANA 33>XP_005272420 Length = 262 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 ERRGQTVNA 9 ERR QT NA Sbjct: 25 ERRAQTANA 33>XP_005276080 Length = 262 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 ERRGQTVNA 9 ERR QT NA Sbjct: 25 ERRAQTANA 33>XP_005250117 Length = 776 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 ERRGQTVN 8 ER G+T+N Sbjct: 190 ERNGETIN 197>NP_003583 Length = 776 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 ERRGQTVN 8 ER G+T+N Sbjct: 190 ERNGETIN 197>NP_009049 Length = 3097 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 RRGQTV 7 RRGQTV Sbjct: 1678 RRGQTV 1683>NP_001157576 Length = 1165 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 RRGQTVNA 9 RRG VNA Sbjct: 218 RRGDVVNA 225>NP_001157577 Length = 1165 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 RRGQTVNA 9 RRG VNA Sbjct: 198 RRGDVVNA 205>NP_061868 Length = 1211 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 RRGQTVNA 9 RRG VNA Sbjct: 218 RRGDVVNA 225>NP_203751 Length = 1143 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 RRGQTVNA 9 RRG+T+N+ Sbjct: 151 RRGRTLNS 158>XP_006725221 Length = 165 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 RRGQTV 7 RRGQTV Sbjct: 9 RRGQTV 14>XP_006724481 Length = 1164 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 RRGQTVNA 9 RRG VNA Sbjct: 218 RRGDVVNA 225>XP_005261980 Length = 1191 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 RRGQTVNA 9 RRG VNA Sbjct: 198 RRGDVVNA 205>XP_006714558 Length = 2612 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 RRGQTV 7 RRGQTV Sbjct: 1193 RRGQTV 1198>XP_006714456 Length = 1143 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 RRGQTVNA 9 RRG+T+N+ Sbjct: 151 RRGRTLNS 158>XP_005263376 Length = 1143 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 RRGQTVNA 9 RRG+T+N+ Sbjct: 151 RRGRTLNS 158>NP_002302 Length = 949 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ERRGQTVNA 9 E+RG+TV A Sbjct: 938 EQRGRTVPA 946>NP_057057 Length = 123 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ERRGQTVNA 9 E+RG T+N+ Sbjct: 30 EKRGWTLNS 38>NP_874362 Length = 522 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 RRGQTVNA 9 R G TVNA Sbjct: 246 RAGSTVNA 253>XP_006721959 Length = 958 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ERRGQTVNA 9 E+RG+TV A Sbjct: 947 EQRGRTVPA 955>XP_006718643 Length = 133 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ERRGQTVNA 9 E+RG T+N+ Sbjct: 30 EKRGWTLNS 38>NP_079042 Length = 323 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 RRGQTVN 8 RRG T+N Sbjct: 263 RRGNTLN 269>NP_004553 Length = 465 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RRGQTVNA 9 R+GQ +NA Sbjct: 75 RKGQEMNA 82>NP_054642 Length = 437 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RRGQTVNA 9 R+GQ +NA Sbjct: 75 RKGQEMNA 82>NP_003986 Length = 1047 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RRGQTVNA 9 +RG+TV A Sbjct: 847 KRGETVQA 854>NP_000897 Length = 1061 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RRGQTVNA 9 +RG+TV A Sbjct: 862 KRGETVQA 869>NP_001269616 Length = 246 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 ERRGQTVNA 9 E GQ +NA Sbjct: 119 ENEGQRINA 127>NP_056492 Length = 342 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 ERRGQTVNA 9 E GQ +NA Sbjct: 215 ENEGQRINA 223>NP_001153069 Length = 323 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 ERRGQTVNA 9 E GQ +NA Sbjct: 215 ENEGQRINA 223>NP_060598 Length = 804 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 RGQTVN 8 RGQT+N Sbjct: 279 RGQTLN 284>NP_001073949 Length = 495 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ERRGQTVNA 9 +RR QT+N+ Sbjct: 480 QRRPQTLNS 488>NP_001269611 Length = 227 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 ERRGQTVNA 9 E GQ +NA Sbjct: 119 ENEGQRINA 127>XP_005251536 Length = 721 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RRGQTVNA 9 +RG+TV A Sbjct: 521 KRGETVQA 528>XP_006716841 Length = 1026 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RRGQTVNA 9 +RG+TV A Sbjct: 826 KRGETVQA 833>XP_005251535 Length = 1050 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RRGQTVNA 9 +RG+TV A Sbjct: 850 KRGETVQA 857>XP_006715062 Length = 463 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ERRGQTVNA 9 +RR QT+N+ Sbjct: 448 QRRPQTLNS 456>XP_005264624 Length = 167 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 RRGQTVN 8 RRG T+N Sbjct: 107 RRGNTLN 113>XP_005245275 Length = 1035 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RRGQTVNA 9 +RG+TV A Sbjct: 836 KRGETVQA 843>XP_006711406 Length = 1036 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RRGQTVNA 9 +RG+TV A Sbjct: 837 KRGETVQA 844>XP_006711405 Length = 1062 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RRGQTVNA 9 +RG+TV A Sbjct: 863 KRGETVQA 870>NP_003384 Length = 351 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ERRGQTVNA 9 ERR +TV++ Sbjct: 300 ERRAETVSS 308Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.308 0.122 0.319 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 499,741 Number of extensions: 533 Number of successful extensions: 52 Number of sequences better than 10000.0: 52 Number of HSP's gapped: 52 Number of HSP's successfully gapped: 52 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.5 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |