Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_115803 18 1135 NP_004829 16 5631 NP_001139193 16 5631 NP_001139196 16 5631 NP_001139194 16 5631 NP_055616 16 5631 NP_005018 16 5631 NP_001032406 16 5631 XP_006723007 16 5631 XP_006723006 16 5631 XP_006718209 16 5631 XP_006718208 16 5631 XP_006718207 16 5631 XP_005252850 16 5631 XP_006711879 16 5631 XP_005273329 16 5631 NP_055947 16 7355 NP_079406 16 7355 XP_005249729 16 7355 NP_001073953 15 9605 NP_001273572 15 9605 NP_057026 15 9605 NP_001796 15 9605 NP_002758 15 9605 NP_001230865 15 9605 NP_001273897 15 9605 NP_005345 15 9605 NP_001230871 15 9605 NP_001230869 15 9605 NP_001230870 15 9605 XP_005256786 15 9605 XP_005256784 15 9605 XP_005256783 15 9605 XP_005256782 15 9605 XP_005256781 15 9605 XP_006716633 15 9605 XP_006716632 15 9605 XP_005250984 15 9605 XP_006716631 15 9605 XP_005250983 15 9605 XP_006711061 15 9605 XP_006711060 15 9605 XP_005244868 15 9605>NP_115803 Length = 1156 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ERLRTRIAV 9 ERLR RIAV Sbjct: 38 ERLRARIAV 46>NP_004829 Length = 361 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ERLRTRIA 8 ERLR R+A Sbjct: 225 ERLRQRVA 232>NP_001139193 Length = 358 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ERLRTRIA 8 ERLR R+A Sbjct: 225 ERLRQRVA 232>NP_001139196 Length = 325 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ERLRTRIA 8 ERLR R+A Sbjct: 189 ERLRQRVA 196>NP_001139194 Length = 361 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ERLRTRIA 8 ERLR R+A Sbjct: 225 ERLRQRVA 232>NP_055616 Length = 2137 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 ERLRTRIA 8 ERL+TR++ Sbjct: 456 ERLKTRVS 463>NP_005018 Length = 728 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 ERLRTRIA 8 ERL++RIA Sbjct: 526 ERLKSRIA 533>NP_001032406 Length = 575 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ERLRTRIAV 9 ERLR +AV Sbjct: 328 ERLRAEVAV 336>XP_006723007 Length = 361 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ERLRTRIA 8 ERLR R+A Sbjct: 225 ERLRQRVA 232>XP_006723006 Length = 361 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ERLRTRIA 8 ERLR R+A Sbjct: 225 ERLRQRVA 232>XP_006718209 Length = 416 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ERLRTRIAV 9 ERLR +AV Sbjct: 288 ERLRAEVAV 296>XP_006718208 Length = 535 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ERLRTRIAV 9 ERLR +AV Sbjct: 288 ERLRAEVAV 296>XP_006718207 Length = 575 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ERLRTRIAV 9 ERLR +AV Sbjct: 328 ERLRAEVAV 336>XP_005252850 Length = 635 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ERLRTRIAV 9 ERLR +AV Sbjct: 388 ERLRAEVAV 396>XP_006711879 Length = 1364 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 ERLRTRIA 8 ERL+TR++ Sbjct: 456 ERLKTRVS 463>XP_005273329 Length = 1934 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 ERLRTRIA 8 ERL+TR++ Sbjct: 253 ERLKTRVS 260>NP_055947 Length = 957 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 RLRTRIA 8 R+RTR+A Sbjct: 859 RMRTRVA 865>NP_079406 Length = 917 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 ERLRTR 6 ERLRTR Sbjct: 773 ERLRTR 778>XP_005249729 Length = 968 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 RLRTRIA 8 R+RTR+A Sbjct: 870 RMRTRVA 876>NP_001073953 Length = 762 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 ERLRTRI 7 ERLR+R+ Sbjct: 493 ERLRSRV 499>NP_001273572 Length = 361 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 ERLRTRIA 8 E L+TR+A Sbjct: 221 ENLKTRVA 228>NP_057026 Length = 417 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 ERLRTRIA 8 E L+TR+A Sbjct: 221 ENLKTRVA 228>NP_001796 Length = 281 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 ERLRTRI 7 ERLR+R+ Sbjct: 244 ERLRSRV 250>NP_002758 Length = 369 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 ERLRTRIAV 9 ERLR IAV Sbjct: 201 ERLRLGIAV 209>NP_001230865 Length = 329 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 ERLRTRIAV 9 ERLR IAV Sbjct: 161 ERLRLGIAV 169>NP_001273897 Length = 304 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ERLRTRIA 8 +RLR RIA Sbjct: 231 KRLRNRIA 238>NP_005345 Length = 347 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ERLRTRIA 8 +RLR RIA Sbjct: 274 KRLRNRIA 281>NP_001230871 Length = 283 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 ERLRTRIAV 9 ERLR IAV Sbjct: 115 ERLRLGIAV 123>NP_001230869 Length = 320 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 ERLRTRIAV 9 ERLR IAV Sbjct: 201 ERLRLGIAV 209>NP_001230870 Length = 283 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 ERLRTRIAV 9 ERLR IAV Sbjct: 115 ERLRLGIAV 123>XP_005256786 Length = 283 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 ERLRTRIAV 9 ERLR IAV Sbjct: 115 ERLRLGIAV 123>XP_005256784 Length = 283 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 ERLRTRIAV 9 ERLR IAV Sbjct: 115 ERLRLGIAV 123>XP_005256783 Length = 369 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 ERLRTRIAV 9 ERLR IAV Sbjct: 201 ERLRLGIAV 209>XP_005256782 Length = 369 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 ERLRTRIAV 9 ERLR IAV Sbjct: 201 ERLRLGIAV 209>XP_005256781 Length = 369 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 ERLRTRIAV 9 ERLR IAV Sbjct: 201 ERLRLGIAV 209>XP_006716633 Length = 227 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 ERLRTRIA 8 E L+TR+A Sbjct: 31 ENLKTRVA 38>XP_006716632 Length = 296 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 ERLRTRIA 8 E L+TR+A Sbjct: 100 ENLKTRVA 107>XP_005250984 Length = 296 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 ERLRTRIA 8 E L+TR+A Sbjct: 100 ENLKTRVA 107>XP_006716631 Length = 304 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 ERLRTRIA 8 E L+TR+A Sbjct: 108 ENLKTRVA 115>XP_005250983 Length = 417 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 ERLRTRIA 8 E L+TR+A Sbjct: 221 ENLKTRVA 228>XP_006711061 Length = 1553 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 ERLRTRI 7 ERLR+R+ Sbjct: 407 ERLRSRV 413>XP_006711060 Length = 1595 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 ERLRTRI 7 ERLR+R+ Sbjct: 449 ERLRSRV 455>XP_005244868 Length = 1639 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 ERLRTRI 7 ERLR+R+ Sbjct: 493 ERLRSRV 499Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.337 0.143 0.355 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 354,615 Number of extensions: 563 Number of successful extensions: 43 Number of sequences better than 10000.0: 43 Number of HSP's gapped: 43 Number of HSP's successfully gapped: 43 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.4 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |