Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000258 19 665 NP_001035957 19 665 XP_006721991 19 665 XP_006721990 19 665 XP_006721989 19 665 XP_005258041 19 665 XP_006721988 19 665 XP_006721987 19 665 XP_006721986 19 665 XP_005258040 19 665 XP_006721985 19 665 NP_001258625 16 7355 NP_001258627 16 7355 NP_004290 16 7355 NP_001258628 16 7355 NP_001253969 16 7355 NP_005680 16 7355 NP_004964 16 7355 NP_001258626 16 7355 NP_005654 16 7355 NP_291025 16 7355 XP_005274450 16 7355 XP_005249146 16 7355 XP_006713980 16 7355 XP_006713979 16 7355 NP_056099 15 9605 NP_009143 15 9605 XP_005245470 15 9605 XP_006710565 15 9605 XP_006710564 15 9605 XP_005270743 15 9605>NP_000258 Length = 2818 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 ERGLKLMS 8 ERGLKLMS Sbjct: 1415 ERGLKLMS 1422>NP_001035957 Length = 2839 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 ERGLKLMS 8 ERGLKLMS Sbjct: 1436 ERGLKLMS 1443>XP_006721991 Length = 1632 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 ERGLKLMS 8 ERGLKLMS Sbjct: 1446 ERGLKLMS 1453>XP_006721990 Length = 2823 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 ERGLKLMS 8 ERGLKLMS Sbjct: 1446 ERGLKLMS 1453>XP_006721989 Length = 2823 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 ERGLKLMS 8 ERGLKLMS Sbjct: 1446 ERGLKLMS 1453>XP_005258041 Length = 2836 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 ERGLKLMS 8 ERGLKLMS Sbjct: 1415 ERGLKLMS 1422>XP_006721988 Length = 2846 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 ERGLKLMS 8 ERGLKLMS Sbjct: 1425 ERGLKLMS 1432>XP_006721987 Length = 2849 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 ERGLKLMS 8 ERGLKLMS Sbjct: 1446 ERGLKLMS 1453>XP_006721986 Length = 2854 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 ERGLKLMS 8 ERGLKLMS Sbjct: 1433 ERGLKLMS 1440>XP_005258040 Length = 2857 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 ERGLKLMS 8 ERGLKLMS Sbjct: 1436 ERGLKLMS 1443>XP_006721985 Length = 2867 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 ERGLKLMS 8 ERGLKLMS Sbjct: 1446 ERGLKLMS 1453>NP_001258625 Length = 752 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 ERGLKL 6 ERGLKL Sbjct: 604 ERGLKL 609>NP_001258627 Length = 726 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 ERGLKL 6 ERGLKL Sbjct: 578 ERGLKL 583>NP_004290 Length = 753 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 ERGLKL 6 ERGLKL Sbjct: 605 ERGLKL 610>NP_001258628 Length = 713 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 ERGLKL 6 ERGLKL Sbjct: 565 ERGLKL 570>NP_001253969 Length = 1074 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 RGLKLM 7 RGLKLM Sbjct: 1004 RGLKLM 1009>NP_005680 Length = 842 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 ERGLKL 6 ERGLKL Sbjct: 722 ERGLKL 727>NP_004964 Length = 1246 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 RGLKLM 7 RGLKLM Sbjct: 1176 RGLKLM 1181>NP_001258626 Length = 712 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 ERGLKL 6 ERGLKL Sbjct: 564 ERGLKL 569>NP_005654 Length = 539 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ERGLKLMSM 9 ERG+KL+ + Sbjct: 262 ERGVKLLDI 270>NP_291025 Length = 963 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 ERGLKL 6 ERGLKL Sbjct: 224 ERGLKL 229>XP_005274450 Length = 654 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 ERGLKL 6 ERGLKL Sbjct: 224 ERGLKL 229>XP_005249146 Length = 1074 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 RGLKLM 7 RGLKLM Sbjct: 1004 RGLKLM 1009>XP_006713980 Length = 458 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ERGLKLMSM 9 ERG+KL+ + Sbjct: 181 ERGVKLLDI 189>XP_006713979 Length = 564 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ERGLKLMSM 9 ERG+KL+ + Sbjct: 287 ERGVKLLDI 295>NP_056099 Length = 3375 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 RGLKLMS 8 RGL LMS Sbjct: 1794 RGLSLMS 1800>NP_009143 Length = 336 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 ERGLKLMSM 9 E GLK+ +M Sbjct: 145 EEGLKIQAM 153>XP_005245470 Length = 287 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 ERGLKLMSM 9 E GLK+ +M Sbjct: 96 EEGLKIQAM 104>XP_006710565 Length = 3140 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 RGLKLMS 8 RGL LMS Sbjct: 1559 RGLSLMS 1565>XP_006710564 Length = 3432 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 RGLKLMS 8 RGL LMS Sbjct: 1851 RGLSLMS 1857>XP_005270743 Length = 3453 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 RGLKLMS 8 RGL LMS Sbjct: 1872 RGLSLMS 1878Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.323 0.135 0.340 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 395,948 Number of extensions: 316 Number of successful extensions: 31 Number of sequences better than 10000.0: 31 Number of HSP's gapped: 31 Number of HSP's successfully gapped: 31 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.5 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.9 bits) S2: 28 (15.4 bits)
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |