Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001245200 19 665 NP_000240 19 665 XP_005265218 19 665 NP_001139150 17 4312 NP_775936 17 4312 XP_006714651 17 4312 NP_006057 16 5631 NP_697021 16 5631 NP_001189342 16 5631 NP_001189343 16 5631 NP_006447 16 5631 NP_071737 16 5631 NP_060754 16 5631 NP_878905 16 5631 XP_006713354 16 5631 XP_005265446 16 5631 XP_005265445 16 5631 XP_005270801 16 5631 XP_005270800 16 5631 XP_005270799 16 5631 XP_005270798 16 5631 XP_006710637 16 5631 NP_001128350 16 5631 NP_001073991 16 7355 NP_001122326 16 7355 NP_001122324 16 7355 NP_001122325 16 7355 NP_056992 16 7355 NP_059984 16 7355 XP_006724893 16 7355 XP_005274763 16 7355 XP_006724892 16 7355 XP_005274762 16 7355 XP_006716086 16 7355 XP_005250465 16 7355 XP_005250464 16 7355 XP_005250463 16 7355 XP_005250462 16 7355 XP_005248236 16 7355 XP_005248234 16 7355 NP_443187 16 7355>NP_001245200 Length = 687 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ERFITSKLQ 9 ERF TSKLQ Sbjct: 78 ERFTTSKLQ 86>NP_000240 Length = 756 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ERFITSKLQ 9 ERF TSKLQ Sbjct: 78 ERFTTSKLQ 86>XP_005265218 Length = 687 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ERFITSKLQ 9 ERF TSKLQ Sbjct: 78 ERFTTSKLQ 86>NP_001139150 Length = 1275 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RFITSKLQ 9 RF+ SKLQ Sbjct: 170 RFLVSKLQ 177>NP_775936 Length = 324 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RFITSKLQ 9 RF+ SKLQ Sbjct: 170 RFLVSKLQ 177>XP_006714651 Length = 1280 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RFITSKLQ 9 RF+ SKLQ Sbjct: 170 RFLVSKLQ 177>NP_006057 Length = 325 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ERFITSKL 8 E F+TSKL Sbjct: 74 ELFVTSKL 81>NP_697021 Length = 325 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ERFITSKL 8 E F+TSKL Sbjct: 74 ELFVTSKL 81>NP_001189342 Length = 325 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ERFITSKL 8 E F+TSKL Sbjct: 74 ELFVTSKL 81>NP_001189343 Length = 325 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ERFITSKL 8 E F+TSKL Sbjct: 74 ELFVTSKL 81>NP_006447 Length = 374 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ERFITSKL 8 ERF+ SKL Sbjct: 285 ERFLKSKL 292>NP_071737 Length = 725 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 ERFITSKL 8 E++ITSK+ Sbjct: 234 EKYITSKI 241>NP_060754 Length = 595 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ERFITSKLQ 9 E+ +TSKLQ Sbjct: 545 EKTLTSKLQ 553>NP_878905 Length = 790 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 ERFITSKL 8 E++ITSK+ Sbjct: 234 EKYITSKI 241>XP_006713354 Length = 748 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 ERFITSKL 8 E++ITSK+ Sbjct: 192 EKYITSKI 199>XP_005265446 Length = 758 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 ERFITSKL 8 E++ITSK+ Sbjct: 267 EKYITSKI 274>XP_005265445 Length = 823 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 ERFITSKL 8 E++ITSK+ Sbjct: 267 EKYITSKI 274>XP_005270801 Length = 461 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ERFITSKLQ 9 E+ +TSKLQ Sbjct: 411 EKTLTSKLQ 419>XP_005270800 Length = 516 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ERFITSKLQ 9 E+ +TSKLQ Sbjct: 466 EKTLTSKLQ 474>XP_005270799 Length = 516 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ERFITSKLQ 9 E+ +TSKLQ Sbjct: 466 EKTLTSKLQ 474>XP_005270798 Length = 544 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ERFITSKLQ 9 E+ +TSKLQ Sbjct: 518 EKTLTSKLQ 526>XP_006710637 Length = 568 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ERFITSKLQ 9 E+ +TSKLQ Sbjct: 518 EKTLTSKLQ 526>NP_001128350 Length = 790 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 ERFITSKL 8 E++ITSK+ Sbjct: 234 EKYITSKI 241>NP_001073991 Length = 1620 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RFITSKLQ 9 +F+T KLQ Sbjct: 448 KFLTDKLQ 455>NP_001122326 Length = 871 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 ERFITSKLQ 9 E+F+TS Q Sbjct: 697 EKFVTSNTQ 705>NP_001122324 Length = 875 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 ERFITSKLQ 9 E+F+TS Q Sbjct: 697 EKFVTSNTQ 705>NP_001122325 Length = 872 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 ERFITSKLQ 9 E+F+TS Q Sbjct: 698 EKFVTSNTQ 706>NP_056992 Length = 876 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 ERFITSKLQ 9 E+F+TS Q Sbjct: 698 EKFVTSNTQ 706>NP_059984 Length = 1871 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 ERFITSKL 8 E+F TSK+ Sbjct: 255 EKFFTSKI 262>XP_006724893 Length = 1719 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 ERFITSKL 8 E+F TSK+ Sbjct: 255 EKFFTSKI 262>XP_005274763 Length = 1789 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 ERFITSKL 8 E+F TSK+ Sbjct: 173 EKFFTSKI 180>XP_006724892 Length = 1841 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 ERFITSKL 8 E+F TSK+ Sbjct: 255 EKFFTSKI 262>XP_005274762 Length = 1853 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 ERFITSKL 8 E+F TSK+ Sbjct: 255 EKFFTSKI 262>XP_006716086 Length = 649 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 ERFITSKLQ 9 E+F+TS Q Sbjct: 471 EKFVTSNTQ 479>XP_005250465 Length = 878 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 ERFITSKLQ 9 E+F+TS Q Sbjct: 704 EKFVTSNTQ 712>XP_005250464 Length = 879 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 ERFITSKLQ 9 E+F+TS Q Sbjct: 705 EKFVTSNTQ 713>XP_005250463 Length = 882 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 ERFITSKLQ 9 E+F+TS Q Sbjct: 704 EKFVTSNTQ 712>XP_005250462 Length = 883 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 ERFITSKLQ 9 E+F+TS Q Sbjct: 705 EKFVTSNTQ 713>XP_005248236 Length = 1262 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RFITSKLQ 9 +F+T KLQ Sbjct: 448 KFLTDKLQ 455>XP_005248234 Length = 1620 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RFITSKLQ 9 +F+T KLQ Sbjct: 448 KFLTDKLQ 455>NP_443187 Length = 710 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 ERFITS 6 ERFITS Sbjct: 174 ERFITS 179Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.324 0.134 0.333 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 336,565 Number of extensions: 455 Number of successful extensions: 41 Number of sequences better than 10000.0: 41 Number of HSP's gapped: 41 Number of HSP's successfully gapped: 41 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.0 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |