Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_060427 18 1482 NP_001185761 18 1935 NP_001185763 18 1935 NP_055459 18 1935 XP_006726410 18 1935 XP_006711719 18 1935 XP_006711718 18 1935 XP_006711717 18 1935 XP_006711716 18 1935 XP_006711715 18 1935 XP_006711714 18 1935 XP_006711713 18 1935 XP_006711712 18 1935 XP_006711711 18 1935 XP_006711710 18 1935 XP_006711709 18 1935 XP_005277503 18 1935 XP_005273038 18 1935 XP_006711708 18 1935 XP_005277500 18 1935 XP_006711707 18 1935 XP_005277499 18 1935 XP_006711706 18 1935 XP_006711705 18 1935 XP_006711164 18 1935 XP_006710143 18 1935 XP_006710142 18 1935 XP_006710141 18 1935 NP_001269903 17 4312 NP_001269900 17 4312 NP_055566 17 4312 XP_006716769 17 4312 XP_005251175 17 4312 XP_006716768 17 4312 XP_006716767 17 4312 XP_006716766 17 4312 XP_005251170 17 4312 XP_006716765 17 4312 XP_006716764 17 4312 XP_006716763 17 4312 XP_005251168 17 4312 XP_005258887 16 7355 XP_005258886 16 7355 XP_006723240 16 7355 XP_006723239 16 7355 NP_001123544 16 7355 NP_001121186 15 9605 NP_078779 15 9605 NP_006725 15 9605 XP_006723058 15 9605 XP_005267014 15 9605 XP_006710872 15 9605 XP_006710871 15 9605 NP_001073903 15 9605 NP_006811 15 9605>NP_060427 Length = 632 Score = 18.1 bits (35), Expect = 1482 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 QLALRLSR 9 QLALRLSR Sbjct: 242 QLALRLSR 249>NP_001185761 Length = 2240 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 EQLALRLSR 9 E LALRLSR Sbjct: 1519 EPLALRLSR 1527>NP_001185763 Length = 2362 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 EQLALRLSR 9 E LALRLSR Sbjct: 1563 EPLALRLSR 1571>NP_055459 Length = 2346 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 EQLALRLSR 9 E LALRLSR Sbjct: 1563 EPLALRLSR 1571>XP_006726410 Length = 2087 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 EQLALRLSR 9 E LALRLSR Sbjct: 1366 EPLALRLSR 1374>XP_006711719 Length = 2302 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 EQLALRLSR 9 E LALRLSR Sbjct: 1519 EPLALRLSR 1527>XP_006711718 Length = 1436 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 EQLALRLSR 9 E LALRLSR Sbjct: 570 EPLALRLSR 578>XP_006711717 Length = 2385 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 EQLALRLSR 9 E LALRLSR Sbjct: 1519 EPLALRLSR 1527>XP_006711716 Length = 2411 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 EQLALRLSR 9 E LALRLSR Sbjct: 1628 EPLALRLSR 1636>XP_006711715 Length = 2428 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 EQLALRLSR 9 E LALRLSR Sbjct: 1562 EPLALRLSR 1570>XP_006711714 Length = 2429 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 EQLALRLSR 9 E LALRLSR Sbjct: 1563 EPLALRLSR 1571>XP_006711713 Length = 2432 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 EQLALRLSR 9 E LALRLSR Sbjct: 1566 EPLALRLSR 1574>XP_006711712 Length = 2473 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 EQLALRLSR 9 E LALRLSR Sbjct: 1726 EPLALRLSR 1734>XP_006711711 Length = 2482 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 EQLALRLSR 9 E LALRLSR Sbjct: 1616 EPLALRLSR 1624>XP_006711710 Length = 2494 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 EQLALRLSR 9 E LALRLSR Sbjct: 1628 EPLALRLSR 1636>XP_006711709 Length = 2495 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 EQLALRLSR 9 E LALRLSR Sbjct: 1629 EPLALRLSR 1637>XP_005277503 Length = 2498 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 EQLALRLSR 9 E LALRLSR Sbjct: 1726 EPLALRLSR 1734>XP_005273038 Length = 2509 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 EQLALRLSR 9 E LALRLSR Sbjct: 1726 EPLALRLSR 1734>XP_006711708 Length = 2512 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 EQLALRLSR 9 E LALRLSR Sbjct: 1726 EPLALRLSR 1734>XP_005277500 Length = 2525 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 EQLALRLSR 9 E LALRLSR Sbjct: 1726 EPLALRLSR 1734>XP_006711707 Length = 2553 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 EQLALRLSR 9 E LALRLSR Sbjct: 1726 EPLALRLSR 1734>XP_005277499 Length = 2561 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 EQLALRLSR 9 E LALRLSR Sbjct: 1726 EPLALRLSR 1734>XP_006711706 Length = 2591 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 EQLALRLSR 9 E LALRLSR Sbjct: 1725 EPLALRLSR 1733>XP_006711705 Length = 2592 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 EQLALRLSR 9 E LALRLSR Sbjct: 1726 EPLALRLSR 1734>XP_006711164 Length = 2087 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 EQLALRLSR 9 E LALRLSR Sbjct: 1366 EPLALRLSR 1374>XP_006710143 Length = 562 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 EQLALRLSR 9 E LALRLSR Sbjct: 405 EPLALRLSR 413>XP_006710142 Length = 671 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 EQLALRLSR 9 E LALRLSR Sbjct: 514 EPLALRLSR 522>XP_006710141 Length = 672 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 EQLALRLSR 9 E LALRLSR Sbjct: 515 EPLALRLSR 523>NP_001269903 Length = 730 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 EQLALRLSR 9 E+LAL LSR Sbjct: 452 EELALALSR 460>NP_001269900 Length = 759 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 EQLALRLSR 9 E+LAL LSR Sbjct: 481 EELALALSR 489>NP_055566 Length = 755 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 EQLALRLSR 9 E+LAL LSR Sbjct: 477 EELALALSR 485>XP_006716769 Length = 677 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 EQLALRLSR 9 E+LAL LSR Sbjct: 399 EELALALSR 407>XP_005251175 Length = 694 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 EQLALRLSR 9 E+LAL LSR Sbjct: 416 EELALALSR 424>XP_006716768 Length = 742 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 EQLALRLSR 9 E+LAL LSR Sbjct: 464 EELALALSR 472>XP_006716767 Length = 758 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 EQLALRLSR 9 E+LAL LSR Sbjct: 480 EELALALSR 488>XP_006716766 Length = 786 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 EQLALRLSR 9 E+LAL LSR Sbjct: 508 EELALALSR 516>XP_005251170 Length = 803 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 EQLALRLSR 9 E+LAL LSR Sbjct: 525 EELALALSR 533>XP_006716765 Length = 851 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 EQLALRLSR 9 E+LAL LSR Sbjct: 573 EELALALSR 581>XP_006716764 Length = 864 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 EQLALRLSR 9 E+LAL LSR Sbjct: 586 EELALALSR 594>XP_006716763 Length = 867 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 EQLALRLSR 9 E+LAL LSR Sbjct: 589 EELALALSR 597>XP_005251168 Length = 868 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 EQLALRLSR 9 E+LAL LSR Sbjct: 590 EELALALSR 598>XP_005258887 Length = 575 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 QLALRLSR 9 QLAL LSR Sbjct: 214 QLALSLSR 221>XP_005258886 Length = 576 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 QLALRLSR 9 QLAL LSR Sbjct: 214 QLALSLSR 221>XP_006723240 Length = 635 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 QLALRLSR 9 QLAL LSR Sbjct: 274 QLALSLSR 281>XP_006723239 Length = 636 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 QLALRLSR 9 QLAL LSR Sbjct: 274 QLALSLSR 281>NP_001123544 Length = 576 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 QLALRLSR 9 QLAL LSR Sbjct: 214 QLALSLSR 221>NP_001121186 Length = 2405 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 EQLALRLS 8 ++LALRLS Sbjct: 362 QKLALRLS 369>NP_078779 Length = 2406 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 EQLALRLS 8 ++LALRLS Sbjct: 362 QKLALRLS 369>NP_006725 Length = 2446 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 EQLALRLS 8 ++LALRLS Sbjct: 367 QKLALRLS 374>XP_006723058 Length = 1460 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 EQLALRLSR 9 EQ+ RLSR Sbjct: 1222 EQIKARLSR 1230>XP_005267014 Length = 2446 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 EQLALRLS 8 ++LALRLS Sbjct: 367 QKLALRLS 374>XP_006710872 Length = 1590 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 EQLALRLS 8 ++LALRLS Sbjct: 362 QKLALRLS 369>XP_006710871 Length = 2406 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 EQLALRLS 8 ++LALRLS Sbjct: 362 QKLALRLS 369>NP_001073903 Length = 1489 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 EQLALRLSR 9 EQ+ RLSR Sbjct: 1251 EQIKARLSR 1259>NP_006811 Length = 452 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 EQLALRLSR 9 EQL RLS+ Sbjct: 110 EQLVCRLSK 118Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.325 0.134 0.314 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 311,301 Number of extensions: 418 Number of successful extensions: 55 Number of sequences better than 10000.0: 55 Number of HSP's gapped: 55 Number of HSP's successfully gapped: 55 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.0 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |