Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001895 20 299 NP_001091680 20 299 NP_001091679 20 299 XP_006713048 20 299 XP_006713047 20 299 XP_006713046 20 299 XP_005264943 20 299 NP_861451 17 4312 NP_079501 16 7355 NP_001124295 16 7355 NP_004303 16 7355 NP_001370 16 7355 NP_061903 16 7355 XP_006724714 16 7355 XP_006722744 16 7355 XP_005254804 16 7355 XP_006720791 16 7355 XP_005254803 16 7355 XP_005254800 16 7355 XP_005254799 16 7355 XP_005248601 16 7355 XP_006714716 16 7355 NP_003913 16 7355 NP_000098 15 9605 NP_001276989 15 9605 NP_004627 15 9605 NP_001276991 15 9605 NP_001276990 15 9605 NP_001276992 15 9605 NP_001005914 15 9605 NP_001265478 15 9605 NP_002601 15 9605 NP_061963 15 9605 NP_056243 15 9605 NP_002069 15 9605 NP_001006657 15 9605 NP_001269375 15 9605 NP_064577 15 9605 NP_060639 15 9605 XP_006719162 15 9605 XP_005253462 15 9605 XP_005252865 15 9605 XP_006718224 15 9605 XP_005265132 15 9605 XP_006712657 15 9605 NP_001073951 15 9605>NP_001895 Length = 781 Score = 20.4 bits (41), Expect = 299 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 EQGFSQSF 8 EQGFSQSF Sbjct: 67 EQGFSQSF 74>NP_001091680 Length = 781 Score = 20.4 bits (41), Expect = 299 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 EQGFSQSF 8 EQGFSQSF Sbjct: 67 EQGFSQSF 74>NP_001091679 Length = 781 Score = 20.4 bits (41), Expect = 299 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 EQGFSQSF 8 EQGFSQSF Sbjct: 67 EQGFSQSF 74>XP_006713048 Length = 720 Score = 20.4 bits (41), Expect = 299 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 EQGFSQSF 8 EQGFSQSF Sbjct: 67 EQGFSQSF 74>XP_006713047 Length = 774 Score = 20.4 bits (41), Expect = 299 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 EQGFSQSF 8 EQGFSQSF Sbjct: 60 EQGFSQSF 67>XP_006713046 Length = 774 Score = 20.4 bits (41), Expect = 299 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 EQGFSQSF 8 EQGFSQSF Sbjct: 60 EQGFSQSF 67>XP_005264943 Length = 781 Score = 20.4 bits (41), Expect = 299 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 EQGFSQSF 8 EQGFSQSF Sbjct: 67 EQGFSQSF 74>NP_861451 Length = 659 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 EQGFSQ 6 EQGFSQ Sbjct: 419 EQGFSQ 424>NP_079501 Length = 481 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 EQGFSQSFA 9 E+G+S SFA Sbjct: 5 ERGWSLSFA 13>NP_001124295 Length = 1632 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 GFSQSFA 9 GFS SFA Sbjct: 494 GFSTSFA 500>NP_004303 Length = 388 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 FSQSFA 9 FSQSFA Sbjct: 265 FSQSFA 270>NP_001370 Length = 1616 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 GFSQSFA 9 GFS SFA Sbjct: 478 GFSTSFA 484>NP_061903 Length = 1369 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 QGFSQSF 8 +GFSQ F Sbjct: 173 EGFSQEF 179>XP_006724714 Length = 343 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 FSQSFA 9 FSQSFA Sbjct: 220 FSQSFA 225>XP_006722744 Length = 1495 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 GFSQSFA 9 GFS SFA Sbjct: 357 GFSTSFA 363>XP_005254804 Length = 4796 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 EQGFSQS 7 E+GFS+S Sbjct: 2781 EEGFSES 2787>XP_006720791 Length = 4853 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 EQGFSQS 7 E+GFS+S Sbjct: 2838 EEGFSES 2844>XP_005254803 Length = 4854 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 EQGFSQS 7 E+GFS+S Sbjct: 2846 EEGFSES 2852>XP_005254800 Length = 4861 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 EQGFSQS 7 E+GFS+S Sbjct: 2846 EEGFSES 2852>XP_005254799 Length = 4861 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 EQGFSQS 7 E+GFS+S Sbjct: 2846 EEGFSES 2852>XP_005248601 Length = 899 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 QGFSQSF 8 +GFSQ F Sbjct: 173 EGFSQEF 179>XP_006714716 Length = 1318 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 QGFSQSF 8 +GFSQ F Sbjct: 173 EGFSQEF 179>NP_003913 Length = 4861 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 EQGFSQS 7 E+GFS+S Sbjct: 2846 EEGFSES 2852>NP_000098 Length = 427 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 EQGFSQSF 8 +QG QSF Sbjct: 87 QQGLQQSF 94>NP_001276989 Length = 749 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 EQGFSQ 6 EQGF+Q Sbjct: 648 EQGFTQ 653>NP_004627 Length = 749 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 EQGFSQ 6 EQGF+Q Sbjct: 648 EQGFTQ 653>NP_001276991 Length = 406 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 EQGFSQ 6 EQGF+Q Sbjct: 305 EQGFTQ 310>NP_001276990 Length = 754 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 EQGFSQ 6 EQGF+Q Sbjct: 653 EQGFTQ 658>NP_001276992 Length = 406 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 EQGFSQ 6 EQGF+Q Sbjct: 305 EQGFTQ 310>NP_001005914 Length = 748 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 EQGFSQ 6 EQGF+Q Sbjct: 647 EQGFTQ 652>NP_001265478 Length = 456 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 GFSQSFA 9 GFS+SF+ Sbjct: 23 GFSRSFS 29>NP_002601 Length = 436 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 GFSQSFA 9 GFS+SF+ Sbjct: 23 GFSRSFS 29>NP_061963 Length = 1047 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 QGFSQSFA 9 +GFS SFA Sbjct: 124 RGFSFSFA 131>NP_056243 Length = 871 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 EQGFSQ 6 E+GFSQ Sbjct: 91 EEGFSQ 96>NP_002069 Length = 2230 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 EQGFSQSFA 9 E G +QSFA Sbjct: 54 ESGDTQSFA 62>NP_001006657 Length = 871 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 EQGFSQ 6 E+GFSQ Sbjct: 91 EEGFSQ 96>NP_001269375 Length = 206 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 EQGFSQSF 8 +QGF+Q + Sbjct: 59 QQGFNQGY 66>NP_064577 Length = 226 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 EQGFSQSF 8 +QGF+Q + Sbjct: 59 QQGFNQGY 66>NP_060639 Length = 1747 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 QGFSQSFA 9 QG +QSF+ Sbjct: 184 QGLNQSFS 191>XP_006719162 Length = 1676 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 QGFSQSFA 9 QG +QSF+ Sbjct: 184 QGLNQSFS 191>XP_005253462 Length = 1747 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 QGFSQSFA 9 QG +QSF+ Sbjct: 184 QGLNQSFS 191>XP_005252865 Length = 238 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 EQGFSQSF 8 +QG QSF Sbjct: 87 QQGLQQSF 94>XP_006718224 Length = 427 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 EQGFSQSF 8 +QG QSF Sbjct: 87 QQGLQQSF 94>XP_005265132 Length = 2214 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 EQGFSQSFA 9 E G +QSFA Sbjct: 54 ESGDTQSFA 62>XP_006712657 Length = 281 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 GFSQSFA 9 GFS+SF+ Sbjct: 23 GFSRSFS 29>NP_001073951 Length = 976 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 QGFSQSFA 9 QGF SFA Sbjct: 288 QGFRGSFA 295Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.314 0.123 0.328 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 542,106 Number of extensions: 1017 Number of successful extensions: 46 Number of sequences better than 10000.0: 46 Number of HSP's gapped: 46 Number of HSP's successfully gapped: 46 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.7 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |