Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000042 20 390 XP_006718908 20 390 XP_005271621 20 390 XP_006718907 20 390 XP_006718906 20 390 XP_005271619 20 390 XP_005271618 20 390 NP_001193856 17 4312 XP_006715067 17 4312 NP_055134 16 7355 NP_004810 16 7355 NP_525124 16 7355 NP_001161086 16 7355 NP_057417 16 7355 XP_005259343 16 7355 XP_005255284 16 7355 XP_005255283 16 7355 XP_006720936 16 7355 XP_006720935 16 7355 XP_005255282 16 7355 XP_005250769 16 7355 XP_005250768 16 7355 XP_005250767 16 7355 NP_001120913 16 7355 NP_001175 15 9605 NP_510868 15 9605>NP_000042 Length = 3056 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 EPMMALRTV 9 EP+MALRTV Sbjct: 2221 EPIMALRTV 2229>XP_006718908 Length = 1708 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 EPMMALRTV 9 EP+MALRTV Sbjct: 873 EPIMALRTV 881>XP_005271621 Length = 2708 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 EPMMALRTV 9 EP+MALRTV Sbjct: 1873 EPIMALRTV 1881>XP_006718907 Length = 3050 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 EPMMALRTV 9 EP+MALRTV Sbjct: 2215 EPIMALRTV 2223>XP_006718906 Length = 3056 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 EPMMALRTV 9 EP+MALRTV Sbjct: 2221 EPIMALRTV 2229>XP_005271619 Length = 3056 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 EPMMALRTV 9 EP+MALRTV Sbjct: 2221 EPIMALRTV 2229>XP_005271618 Length = 3056 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 EPMMALRTV 9 EP+MALRTV Sbjct: 2221 EPIMALRTV 2229>NP_001193856 Length = 4707 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 EPMMALRTV 9 EPMM RT+ Sbjct: 2707 EPMMFQRTI 2715>XP_006715067 Length = 4707 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 EPMMALRTV 9 EPMM RT+ Sbjct: 2707 EPMMFQRTI 2715>NP_055134 Length = 911 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 EPMMALRTV 9 EP+ A RTV Sbjct: 236 EPLWASRTV 244>NP_004810 Length = 1274 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 PMMALRTV 9 PM+ +RTV Sbjct: 995 PMLLMRTV 1002>NP_525124 Length = 436 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 EPMMALRTV 9 E MALRT+ Sbjct: 419 ETWMALRTI 427>NP_001161086 Length = 910 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 EPMMALRTV 9 EP+ A RTV Sbjct: 236 EPLWASRTV 244>NP_057417 Length = 2752 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 PMMALRT 8 P+M+LRT Sbjct: 2216 PLMSLRT 2222>XP_005259343 Length = 1274 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 PMMALRTV 9 PM+ +RTV Sbjct: 995 PMLLMRTV 1002>XP_005255284 Length = 2581 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 PMMALRT 8 P+M+LRT Sbjct: 2216 PLMSLRT 2222>XP_005255283 Length = 2751 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 PMMALRT 8 P+M+LRT Sbjct: 2216 PLMSLRT 2222>XP_006720936 Length = 2751 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 PMMALRT 8 P+M+LRT Sbjct: 2215 PLMSLRT 2221>XP_006720935 Length = 2752 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 PMMALRT 8 P+M+LRT Sbjct: 2216 PLMSLRT 2222>XP_005255282 Length = 2752 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 PMMALRT 8 P+M+LRT Sbjct: 2216 PLMSLRT 2222>XP_005250769 Length = 436 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 EPMMALRTV 9 E MALRT+ Sbjct: 419 ETWMALRTI 427>XP_005250768 Length = 436 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 EPMMALRTV 9 E MALRT+ Sbjct: 419 ETWMALRTI 427>XP_005250767 Length = 436 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 EPMMALRTV 9 E MALRT+ Sbjct: 419 ETWMALRTI 427>NP_001120913 Length = 436 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 EPMMALRTV 9 E MALRT+ Sbjct: 419 ETWMALRTI 427>NP_001175 Length = 2644 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 EPMMALR 7 EP++ALR Sbjct: 1898 EPILALR 1904>NP_510868 Length = 314 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 PMMALRTV 9 PM LRTV Sbjct: 286 PMTPLRTV 293Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.328 0.130 0.354 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 376,751 Number of extensions: 438 Number of successful extensions: 26 Number of sequences better than 10000.0: 26 Number of HSP's gapped: 26 Number of HSP's successfully gapped: 26 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.2 bits) S2: 28 (15.4 bits)
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |