Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_443179 19 869 XP_005266703 19 869 NP_001245344 17 3301 NP_065860 17 3301 NP_001245347 17 3301 NP_001245346 17 3301 NP_001245345 17 3301 NP_001166101 17 3301 XP_006723066 17 3301 XP_006723065 17 3301 XP_005258546 17 3301 XP_006723064 17 3301 XP_005258545 17 3301 XP_005258544 17 3301 XP_006723063 17 3301 XP_006723062 17 3301 XP_005271685 17 3301 XP_006718956 17 3301 NP_001140155 17 4312 NP_004835 17 4312 NP_001018009 17 4312 XP_006720296 17 4312 XP_006713483 17 4312 NP_055572 16 5631 NP_061744 16 5631 NP_114478 16 5631 NP_001165599 16 7355 NP_757366 16 7355 XP_005254400 16 7355 XP_005254399 16 7355 NP_065805 15 9605 NP_002408 15 9605 NP_001139438 15 9605 NP_057636 15 9605 NP_001269710 15 9605 NP_001269700 15 9605 XP_006717927 15 9605 XP_005247728 15 9605 XP_006713777 15 9605 XP_006712635 15 9605 XP_006712634 15 9605 XP_006712633 15 9605 XP_005247077 15 9605 XP_006712631 15 9605 XP_006712630 15 9605 NP_115271 15 9605 NP_116175 15 9605 NP_061749 15 9605>NP_443179 Length = 2170 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 EPLAVSVAS 9 EP+AVSVAS Sbjct: 770 EPVAVSVAS 778>XP_005266703 Length = 1501 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 EPLAVSVAS 9 EP+AVSVAS Sbjct: 101 EPVAVSVAS 109>NP_001245344 Length = 1168 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 EPLAVSVAS 9 +P+A+SVAS Sbjct: 774 KPVAISVAS 782>NP_065860 Length = 1191 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 EPLAVSVAS 9 +P+A+SVAS Sbjct: 797 KPVAISVAS 805>NP_001245347 Length = 1155 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 EPLAVSVAS 9 +P+A+SVAS Sbjct: 761 KPVAISVAS 769>NP_001245346 Length = 1155 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 EPLAVSVAS 9 +P+A+SVAS Sbjct: 761 KPVAISVAS 769>NP_001245345 Length = 1165 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 EPLAVSVAS 9 +P+A+SVAS Sbjct: 771 KPVAISVAS 779>NP_001166101 Length = 1123 Score = 16.9 bits (32), Expect = 3301 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 EPLAVSV 7 EPLAVSV Sbjct: 661 EPLAVSV 667>XP_006723066 Length = 818 Score = 16.9 bits (32), Expect = 3301 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 EPLAVSV 7 EPLAVSV Sbjct: 328 EPLAVSV 334>XP_006723065 Length = 1162 Score = 16.9 bits (32), Expect = 3301 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 EPLAVSV 7 EPLAVSV Sbjct: 672 EPLAVSV 678>XP_005258546 Length = 1259 Score = 16.9 bits (32), Expect = 3301 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 EPLAVSV 7 EPLAVSV Sbjct: 797 EPLAVSV 803>XP_006723064 Length = 1270 Score = 16.9 bits (32), Expect = 3301 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 EPLAVSV 7 EPLAVSV Sbjct: 808 EPLAVSV 814>XP_005258545 Length = 1287 Score = 16.9 bits (32), Expect = 3301 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 EPLAVSV 7 EPLAVSV Sbjct: 797 EPLAVSV 803>XP_005258544 Length = 1288 Score = 16.9 bits (32), Expect = 3301 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 EPLAVSV 7 EPLAVSV Sbjct: 798 EPLAVSV 804>XP_006723063 Length = 1297 Score = 16.9 bits (32), Expect = 3301 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 EPLAVSV 7 EPLAVSV Sbjct: 807 EPLAVSV 813>XP_006723062 Length = 1298 Score = 16.9 bits (32), Expect = 3301 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 EPLAVSV 7 EPLAVSV Sbjct: 808 EPLAVSV 814>XP_005271685 Length = 734 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 EPLAVSVAS 9 +P+A+SVAS Sbjct: 340 KPVAISVAS 348>XP_006718956 Length = 1191 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 EPLAVSVAS 9 +P+A+SVAS Sbjct: 797 KPVAISVAS 805>NP_001140155 Length = 217 Score = 16.5 bits (31), Expect = 4312 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 PLAVSVA 8 PLAVSVA Sbjct: 48 PLAVSVA 54>NP_004835 Length = 455 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 EPLAVSVAS 9 EP A+SVAS Sbjct: 291 EPDAISVAS 299>NP_001018009 Length = 298 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 EPLAVSVAS 9 EP A+SVAS Sbjct: 134 EPDAISVAS 142>XP_006720296 Length = 217 Score = 16.5 bits (31), Expect = 4312 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 PLAVSVA 8 PLAVSVA Sbjct: 48 PLAVSVA 54>XP_006713483 Length = 298 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 EPLAVSVAS 9 EP A+SVAS Sbjct: 134 EPDAISVAS 142>NP_055572 Length = 1016 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 EPLAVSVAS 9 +P AVSVAS Sbjct: 596 QPPAVSVAS 604>NP_061744 Length = 932 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 EPLAVSVAS 9 EPL VSV S Sbjct: 789 EPLCVSVDS 797>NP_114478 Length = 828 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 EPLAVSVAS 9 EPL VSV S Sbjct: 789 EPLCVSVDS 797>NP_001165599 Length = 1331 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 EPLAVSVAS 9 EP+ +S+AS Sbjct: 551 EPVVLSIAS 559>NP_757366 Length = 1332 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 EPLAVSVAS 9 EP+ +S+AS Sbjct: 551 EPVVLSIAS 559>XP_005254400 Length = 1378 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 EPLAVSVAS 9 EP+ +S+AS Sbjct: 598 EPVVLSIAS 606>XP_005254399 Length = 1379 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 EPLAVSVAS 9 EP+ +S+AS Sbjct: 598 EPVVLSIAS 606>NP_065805 Length = 1444 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 EPLAVSV 7 EP AVSV Sbjct: 488 EPFAVSV 494>NP_002408 Length = 3256 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 EPLAVS 6 EPLAVS Sbjct: 2494 EPLAVS 2499>NP_001139438 Length = 2896 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 EPLAVS 6 EPLAVS Sbjct: 2134 EPLAVS 2139>NP_057636 Length = 941 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 PLAVSVAS 9 PL++S+AS Sbjct: 698 PLSLSIAS 705>NP_001269710 Length = 702 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 PLAVSVAS 9 PL++S+AS Sbjct: 459 PLSLSIAS 466>NP_001269700 Length = 1030 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 PLAVSVAS 9 PL++S+AS Sbjct: 787 PLSLSIAS 794>XP_006717927 Length = 2406 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 EPLAVS 6 EPLAVS Sbjct: 1644 EPLAVS 1649>XP_005247728 Length = 1413 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 EPLAVSV 7 EP AVSV Sbjct: 457 EPFAVSV 463>XP_006713777 Length = 1424 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 EPLAVSV 7 EP AVSV Sbjct: 468 EPFAVSV 474>XP_006712635 Length = 610 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 PLAVSVAS 9 PL++S+AS Sbjct: 367 PLSLSIAS 374>XP_006712634 Length = 703 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 PLAVSVAS 9 PL++S+AS Sbjct: 460 PLSLSIAS 467>XP_006712633 Length = 711 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 PLAVSVAS 9 PL++S+AS Sbjct: 468 PLSLSIAS 475>XP_005247077 Length = 778 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 PLAVSVAS 9 PL++S+AS Sbjct: 535 PLSLSIAS 542>XP_006712631 Length = 800 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 PLAVSVAS 9 PL++S+AS Sbjct: 557 PLSLSIAS 564>XP_006712630 Length = 941 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 PLAVSVAS 9 PL++S+AS Sbjct: 698 PLSLSIAS 705>NP_115271 Length = 820 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 EPLAVS 6 EPLAVS Sbjct: 497 EPLAVS 502>NP_116175 Length = 434 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 PLAVSVA 8 P+AVSVA Sbjct: 386 PVAVSVA 392>NP_061749 Length = 930 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 EPLAVS 6 EPLAVS Sbjct: 497 EPLAVS 502Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.300 0.113 0.269 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 407,359 Number of extensions: 608 Number of successful extensions: 48 Number of sequences better than 10000.0: 48 Number of HSP's gapped: 48 Number of HSP's successfully gapped: 48 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.3 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |