Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000258 21 229 NP_001035957 21 229 XP_006721990 21 229 XP_006721989 21 229 XP_005258041 21 229 XP_006721988 21 229 XP_006721987 21 229 XP_006721986 21 229 XP_005258040 21 229 XP_006721985 21 229 NP_057016 19 665 NP_612354 18 1482 XP_006713882 18 1482 XP_006713881 18 1482 NP_079353 17 2528 XP_005270470 17 2528 XP_005270469 17 2528 NP_071881 17 4312 XP_005264537 17 4312 XP_006712136 17 4312 NP_001265546 16 5631 NP_001265545 16 5631 NP_004327 16 5631 NP_001136256 16 5631 NP_071761 16 5631 NP_001268661 16 5631 NP_076983 16 5631 NP_116564 16 7355 NP_001093156 16 7355 NP_001245283 16 7355 NP_071336 16 7355 NP_004238 16 7355 NP_001245282 16 7355 NP_001136077 16 7355 NP_056002 16 7355 NP_909119 16 7355 NP_057537 16 7355 XP_005262224 16 7355 XP_005262223 16 7355 XP_005262222 16 7355 XP_006723412 16 7355 XP_006723411 16 7355 XP_006723410 16 7355 XP_006723409 16 7355 XP_006723408 16 7355 XP_006714020 16 7355 XP_005248200 16 7355 XP_006714019 16 7355 XP_005265280 16 7355 XP_006713268 16 7355 NP_115495 15 9605 NP_001278253 15 9605 NP_001244947 15 9605 NP_758962 15 9605 NP_001244946 15 9605 NP_001103132 15 9605 NP_690863 15 9605 NP_001032203 15 9605 NP_060474 15 9605 NP_068579 15 9605 NP_055184 15 9605 XP_006722053 15 9605 XP_006722052 15 9605 XP_005274043 15 9605 XP_006718611 15 9605 XP_005250580 15 9605 XP_005247626 15 9605 XP_005247625 15 9605 XP_006712480 15 9605 XP_006712478 15 9605 XP_006712127 15 9605 NP_001034841 15 9605>NP_000258 Length = 2818 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 EPHLMLEFL 9 EPHL LEFL Sbjct: 1898 EPHLTLEFL 1906>NP_001035957 Length = 2839 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 EPHLMLEFL 9 EPHL LEFL Sbjct: 1919 EPHLTLEFL 1927>XP_006721990 Length = 2823 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 EPHLMLEFL 9 EPHL LEFL Sbjct: 1929 EPHLTLEFL 1937>XP_006721989 Length = 2823 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 EPHLMLEFL 9 EPHL LEFL Sbjct: 1929 EPHLTLEFL 1937>XP_005258041 Length = 2836 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 EPHLMLEFL 9 EPHL LEFL Sbjct: 1898 EPHLTLEFL 1906>XP_006721988 Length = 2846 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 EPHLMLEFL 9 EPHL LEFL Sbjct: 1908 EPHLTLEFL 1916>XP_006721987 Length = 2849 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 EPHLMLEFL 9 EPHL LEFL Sbjct: 1929 EPHLTLEFL 1937>XP_006721986 Length = 2854 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 EPHLMLEFL 9 EPHL LEFL Sbjct: 1916 EPHLTLEFL 1924>XP_005258040 Length = 2857 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 EPHLMLEFL 9 EPHL LEFL Sbjct: 1919 EPHLTLEFL 1927>XP_006721985 Length = 2867 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 EPHLMLEFL 9 EPHL LEFL Sbjct: 1929 EPHLTLEFL 1937>NP_057016 Length = 141 Score = 19.2 bits (38), Expect = 665 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 EPHLMLEF 8 EPHLM+E+ Sbjct: 129 EPHLMVEY 136>NP_612354 Length = 1242 Score = 18.1 bits (35), Expect = 1482 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 EPHLMLE 7 +PHLMLE Sbjct: 277 QPHLMLE 283>XP_006713882 Length = 1242 Score = 18.1 bits (35), Expect = 1482 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 EPHLMLE 7 +PHLMLE Sbjct: 277 QPHLMLE 283>XP_006713881 Length = 1024 Score = 18.1 bits (35), Expect = 1482 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 EPHLMLE 7 +PHLMLE Sbjct: 58 QPHLMLE 64>NP_079353 Length = 510 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 PHLMLEF 8 PHL LEF Sbjct: 264 PHLTLEF 270>XP_005270470 Length = 464 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 PHLMLEF 8 PHL LEF Sbjct: 218 PHLTLEF 224>XP_005270469 Length = 516 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 PHLMLEF 8 PHL LEF Sbjct: 270 PHLTLEF 276>NP_071881 Length = 651 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 PHLMLEFL 9 PHL+ EFL Sbjct: 509 PHLIGEFL 516>XP_005264537 Length = 558 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 PHLMLEFL 9 PHL+ EFL Sbjct: 509 PHLIGEFL 516>XP_006712136 Length = 593 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 PHLMLEFL 9 PHL+ EFL Sbjct: 509 PHLIGEFL 516>NP_001265546 Length = 1028 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 HLMLEFL 9 HLM EFL Sbjct: 51 HLMKEFL 57>NP_001265545 Length = 1065 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 HLMLEFL 9 HLM EFL Sbjct: 31 HLMKEFL 37>NP_004327 Length = 1085 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 HLMLEFL 9 HLM EFL Sbjct: 51 HLMKEFL 57>NP_001136256 Length = 422 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 EPHLMLEF 8 +PH +L+F Sbjct: 249 QPHFLLKF 256>NP_071761 Length = 396 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 PHLMLE 7 PHL+LE Sbjct: 96 PHLLLE 101>NP_001268661 Length = 723 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 PHLMLE 7 PHL+LE Sbjct: 213 PHLLLE 218>NP_076983 Length = 516 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 EPHLMLEFL 9 +P LM++FL Sbjct: 286 QPTLMIDFL 294>NP_116564 Length = 365 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 HLMLEFL 9 HL+L+FL Sbjct: 279 HLVLQFL 285>NP_001093156 Length = 626 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 HLMLEFL 9 HL+L+FL Sbjct: 390 HLVLQFL 396>NP_001245283 Length = 962 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 PHLMLEFL 9 PHL EF+ Sbjct: 917 PHLAREFM 924>NP_071336 Length = 626 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 HLMLEFL 9 HL+L+FL Sbjct: 390 HLVLQFL 396>NP_004238 Length = 972 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 PHLMLEFL 9 PHL EF+ Sbjct: 927 PHLAREFM 934>NP_001245282 Length = 972 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 PHLMLEFL 9 PHL EF+ Sbjct: 927 PHLAREFM 934>NP_001136077 Length = 937 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 PHLMLEFL 9 PHL EF+ Sbjct: 892 PHLAREFM 899>NP_056002 Length = 1132 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 PHLMLEFL 9 PH +L+FL Sbjct: 1001 PHHILDFL 1008>NP_909119 Length = 715 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 PHLMLEFL 9 PH +L+FL Sbjct: 604 PHSVLKFL 611>NP_057537 Length = 722 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 PHLMLEFL 9 PH +L+FL Sbjct: 611 PHSVLKFL 618>XP_005262224 Length = 302 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 HLMLEFL 9 HL+L+FL Sbjct: 216 HLVLQFL 222>XP_005262223 Length = 305 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 HLMLEFL 9 HL+L+FL Sbjct: 216 HLVLQFL 222>XP_005262222 Length = 368 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 HLMLEFL 9 HL+L+FL Sbjct: 279 HLVLQFL 285>XP_006723412 Length = 512 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 EPHLMLEF 8 E HL+L+F Sbjct: 475 EEHLVLQF 482>XP_006723411 Length = 531 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 EPHLMLEF 8 E HL+L+F Sbjct: 494 EEHLVLQF 501>XP_006723410 Length = 531 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 EPHLMLEF 8 E HL+L+F Sbjct: 494 EEHLVLQF 501>XP_006723409 Length = 542 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 EPHLMLEF 8 E HL+L+F Sbjct: 505 EEHLVLQF 512>XP_006723408 Length = 545 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 EPHLMLEF 8 E HL+L+F Sbjct: 508 EEHLVLQF 515>XP_006714020 Length = 1097 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 PHLMLEFL 9 PH +L+FL Sbjct: 966 PHHILDFL 973>XP_005248200 Length = 1103 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 PHLMLEFL 9 PH +L+FL Sbjct: 1001 PHHILDFL 1008>XP_006714019 Length = 1104 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 PHLMLEFL 9 PH +L+FL Sbjct: 973 PHHILDFL 980>XP_005265280 Length = 644 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 PHLMLEFL 9 PH +L+FL Sbjct: 533 PHSVLKFL 540>XP_006713268 Length = 695 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 PHLMLEFL 9 PH +L+FL Sbjct: 584 PHSVLKFL 591>NP_115495 Length = 6306 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 EPHLMLEFL 9 +PH ++EF+ Sbjct: 885 DPHGIIEFV 893>NP_001278253 Length = 2639 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 2 PHLMLE 7 PHLM++ Sbjct: 798 PHLMMQ 803>NP_001244947 Length = 589 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 EPHLMLEFL 9 E H +LE+L Sbjct: 229 ERHTLLEYL 237>NP_758962 Length = 589 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 EPHLMLEFL 9 E H +LE+L Sbjct: 229 ERHTLLEYL 237>NP_001244946 Length = 589 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 EPHLMLEFL 9 E H +LE+L Sbjct: 229 ERHTLLEYL 237>NP_001103132 Length = 4284 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 PHLMLEFL 9 P++ LEFL Sbjct: 4157 PYINLEFL 4164>NP_690863 Length = 567 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 EPHLMLEFL 9 E H +LE+L Sbjct: 207 ERHTLLEYL 215>NP_001032203 Length = 473 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 EPHLMLEFL 9 +P L+LE L Sbjct: 334 QPRLLLELL 342>NP_060474 Length = 275 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 2 PHLML 6 PHLML Sbjct: 75 PHLML 79>NP_068579 Length = 974 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 EPHLMLEFL 9 +P L+LE L Sbjct: 334 QPRLLLELL 342>NP_055184 Length = 460 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 2 PHLMLEF 8 PH +L+F Sbjct: 109 PHTLLDF 115>XP_006722053 Length = 2608 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 2 PHLMLE 7 PHLM++ Sbjct: 798 PHLMMQ 803>XP_006722052 Length = 2631 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 2 PHLMLE 7 PHLM++ Sbjct: 798 PHLMMQ 803>XP_005274043 Length = 365 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 2 PHLMLE 7 PH++LE Sbjct: 33 PHILLE 38>XP_006718611 Length = 433 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 2 PHLMLE 7 PH++LE Sbjct: 33 PHILLE 38>XP_005250580 Length = 485 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 EPHLMLEFL 9 +P L+LE L Sbjct: 334 QPRLLLELL 342>XP_005247626 Length = 291 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 2 PHLML 6 PHLML Sbjct: 91 PHLML 95>XP_005247625 Length = 291 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 2 PHLML 6 PHLML Sbjct: 91 PHLML 95>XP_006712480 Length = 464 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 2 PHLMLEF 8 PH +L+F Sbjct: 109 PHTLLDF 115>XP_006712478 Length = 451 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 2 PHLMLEF 8 PH +L+F Sbjct: 109 PHTLLDF 115>XP_006712127 Length = 1909 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 PHLMLEF 8 PH +LEF Sbjct: 1717 PHPILEF 1723>NP_001034841 Length = 541 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 2 PHLMLE 7 PH++LE Sbjct: 33 PHILLE 38Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.332 0.151 0.469 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 713,572 Number of extensions: 1052 Number of successful extensions: 72 Number of sequences better than 10000.0: 72 Number of HSP's gapped: 72 Number of HSP's successfully gapped: 72 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.1 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |