Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001155973 21 229 NP_055903 21 229 NP_001093591 17 2528 NP_001093590 17 2528 NP_001032401 17 2528 NP_055508 17 2528 NP_003289 17 3301 NP_001138890 17 3301 XP_006724234 17 3301 XP_005261462 17 3301 XP_006714747 17 3301 XP_006714745 17 3301 XP_006713383 17 3301 XP_005265485 17 3301 NP_001257368 16 5631 NP_005708 16 5631 NP_056432 16 5631 XP_005254357 16 5631 NP_000319 16 7355 NP_008995 16 7355 NP_001019831 16 7355 NP_065068 16 7355 NP_055699 16 7355 NP_001017392 16 7355 NP_060733 16 7355 NP_112240 16 7355 XP_005272690 16 7355 XP_006724601 16 7355 XP_005252307 16 7355 XP_006713877 16 7355 XP_006713876 16 7355 XP_006713875 16 7355 XP_006713874 16 7355 XP_006713873 16 7355 XP_006712103 16 7355 XP_006712102 16 7355 XP_005245414 16 7355 NP_001136273 15 9605 NP_001136272 15 9605 NP_005973 15 9605 NP_938024 15 9605 NP_004124 15 9605 NP_036584 15 9605 NP_060034 15 9605 NP_078873 15 9605 NP_001166988 15 9605 NP_065803 15 9605 NP_006258 15 9605 NP_001166987 15 9605 NP_001275882 15 9605 NP_065191 15 9605 NP_001275880 15 9605 NP_004960 15 9605 NP_149095 15 9605 NP_001243359 15 9605 XP_005262529 15 9605 XP_006720342 15 9605 XP_006719539 15 9605 XP_005269826 15 9605 XP_005269823 15 9605 XP_005264064 15 9605 XP_005264063 15 9605 XP_005264062 15 9605 XP_005264061 15 9605 XP_005264060 15 9605 XP_005264059 15 9605 XP_005264497 15 9605 XP_005264496 15 9605>NP_001155973 Length = 1833 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 ENTTDNSSA 9 ENTTDN+SA Sbjct: 213 ENTTDNNSA 221>NP_055903 Length = 1723 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 ENTTDNSSA 9 ENTTDN+SA Sbjct: 213 ENTTDNNSA 221>NP_001093591 Length = 765 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 ENTTDNSSA 9 ENTT NSS+ Sbjct: 160 ENTTFNSSS 168>NP_001093590 Length = 811 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 ENTTDNSSA 9 ENTT NSS+ Sbjct: 206 ENTTFNSSS 214>NP_001032401 Length = 736 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 ENTTDNSSA 9 ENTT NSS+ Sbjct: 131 ENTTFNSSS 139>NP_055508 Length = 883 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 ENTTDNSSA 9 ENTT NSS+ Sbjct: 278 ENTTFNSSS 286>NP_003289 Length = 615 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 NTTDNSSA 9 NTTD+SS+ Sbjct: 340 NTTDSSSS 347>NP_001138890 Length = 2481 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ENTTDNSS 8 ENT +NSS Sbjct: 1267 ENTVENSS 1274>XP_006724234 Length = 2363 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ENTTDNSS 8 ENT +NSS Sbjct: 1149 ENTVENSS 1156>XP_005261462 Length = 2473 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ENTTDNSS 8 ENT +NSS Sbjct: 1267 ENTVENSS 1274>XP_006714747 Length = 365 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 ENTTDNS 7 E+TTDNS Sbjct: 355 ESTTDNS 361>XP_006714745 Length = 396 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 ENTTDNS 7 E+TTDNS Sbjct: 386 ESTTDNS 392>XP_006713383 Length = 615 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 NTTDNSSA 9 NTTD+SS+ Sbjct: 340 NTTDSSSS 347>XP_005265485 Length = 596 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 NTTDNSSA 9 NTTD+SS+ Sbjct: 321 NTTDSSSS 328>NP_001257368 Length = 154 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ENTTDNSSA 9 E+ +DNSSA Sbjct: 118 ESPSDNSSA 126>NP_005708 Length = 151 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ENTTDNSSA 9 E+ +DNSSA Sbjct: 115 ESPSDNSSA 123>NP_056432 Length = 419 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ENTTDNSSA 9 +NT NSSA Sbjct: 247 KNTNQNSSA 255>XP_005254357 Length = 419 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ENTTDNSSA 9 +NT NSSA Sbjct: 247 KNTNQNSSA 255>NP_000319 Length = 815 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ENTTDNSSA 9 E T D+SSA Sbjct: 684 ERTNDDSSA 692>NP_008995 Length = 1289 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 TDNSSA 9 TDNSSA Sbjct: 817 TDNSSA 822>NP_001019831 Length = 2986 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 TDNSSA 9 TDNSSA Sbjct: 2514 TDNSSA 2519>NP_065068 Length = 521 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 ENTTDNSS 8 EN+T+NS+ Sbjct: 313 ENSTNNST 320>NP_055699 Length = 1082 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 ENTTDN 6 EN+TDN Sbjct: 808 ENSTDN 813>NP_001017392 Length = 1082 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 ENTTDN 6 EN+TDN Sbjct: 808 ENSTDN 813>NP_060733 Length = 1435 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 NTTDNSS 8 NTT+NS+ Sbjct: 997 NTTENST 1003>NP_112240 Length = 153 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ENTTDNSSA 9 E T+NSSA Sbjct: 117 EKPTENSSA 125>XP_005272690 Length = 704 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ENTTDNSSA 9 E T D+SSA Sbjct: 573 ERTNDDSSA 581>XP_006724601 Length = 1020 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ENTTDNSSA 9 E T D+SSA Sbjct: 889 ERTNDDSSA 897>XP_005252307 Length = 153 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ENTTDNSSA 9 E T+NSSA Sbjct: 117 EKPTENSSA 125>XP_006713877 Length = 2956 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 TDNSSA 9 TDNSSA Sbjct: 2484 TDNSSA 2489>XP_006713876 Length = 2966 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 TDNSSA 9 TDNSSA Sbjct: 2494 TDNSSA 2499>XP_006713875 Length = 2975 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 TDNSSA 9 TDNSSA Sbjct: 2503 TDNSSA 2508>XP_006713874 Length = 2979 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 TDNSSA 9 TDNSSA Sbjct: 2507 TDNSSA 2512>XP_006713873 Length = 2988 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 TDNSSA 9 TDNSSA Sbjct: 2516 TDNSSA 2521>XP_006712103 Length = 1175 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 NTTDNSS 8 NTT+NS+ Sbjct: 737 NTTENST 743>XP_006712102 Length = 1313 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 NTTDNSS 8 NTT+NS+ Sbjct: 875 NTTENST 881>XP_005245414 Length = 521 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 ENTTDNSS 8 EN+T+NS+ Sbjct: 313 ENSTNNST 320>NP_001136273 Length = 619 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 ENTTDN 6 ENTTD+ Sbjct: 565 ENTTDD 570>NP_001136272 Length = 3144 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 ENTTDN 6 ENTTD+ Sbjct: 565 ENTTDD 570>NP_005973 Length = 284 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ENTTDNSSA 9 ENT +N+S+ Sbjct: 188 ENTENNNSS 196>NP_938024 Length = 594 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 ENTTDN 6 ENTTD+ Sbjct: 565 ENTTDD 570>NP_004124 Length = 445 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 2 NTTDN 6 NTTDN Sbjct: 39 NTTDN 43>NP_036584 Length = 293 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 ENTTDNS 7 EN +DNS Sbjct: 127 ENNSDNS 133>NP_060034 Length = 2551 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 2 NTTDN 6 NTTDN Sbjct: 619 NTTDN 623>NP_078873 Length = 876 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 NTTDNSSA 9 NTT SSA Sbjct: 849 NTTSRSSA 856>NP_001166988 Length = 841 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 NTTDNSSA 9 NTT SSA Sbjct: 814 NTTSRSSA 821>NP_065803 Length = 1215 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 ENTTDNSS 8 E TT+NS+ Sbjct: 841 EETTENST 848>NP_006258 Length = 3224 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 1 ENTTDN 6 ENT DN Sbjct: 2701 ENTADN 2706>NP_001166987 Length = 858 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 NTTDNSSA 9 NTT SSA Sbjct: 831 NTTSRSSA 838>NP_001275882 Length = 824 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ENTTDNSSA 9 E TT+NS++ Sbjct: 181 EKTTNNSTS 189>NP_065191 Length = 858 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ENTTDNSSA 9 E TT+NS++ Sbjct: 215 EKTTNNSTS 223>NP_001275880 Length = 882 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ENTTDNSSA 9 E TT+NS++ Sbjct: 215 EKTTNNSTS 223>NP_004960 Length = 1019 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 TTDNSSA 9 TTD SSA Sbjct: 82 TTDKSSA 88>NP_149095 Length = 905 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 NTTDNSSA 9 ++TDNSS+ Sbjct: 188 DSTDNSSS 195>NP_001243359 Length = 920 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 NTTDNSSA 9 ++TDNSS+ Sbjct: 188 DSTDNSSS 195>XP_005262529 Length = 875 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 NTTDNSSA 9 NTT SSA Sbjct: 848 NTTSRSSA 855>XP_006720342 Length = 898 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 NTTDNSSA 9 ++TDNSS+ Sbjct: 188 DSTDNSSS 195>XP_006719539 Length = 2246 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 2 NTTDN 6 NTTDN Sbjct: 619 NTTDN 623>XP_005269826 Length = 609 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 TTDNSSA 9 TTD SSA Sbjct: 82 TTDKSSA 88>XP_005269823 Length = 1019 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 TTDNSSA 9 TTD SSA Sbjct: 82 TTDKSSA 88>XP_005264064 Length = 2282 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 1 ENTTDN 6 ENT DN Sbjct: 1751 ENTADN 1756>XP_005264063 Length = 3136 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 1 ENTTDN 6 ENT DN Sbjct: 2605 ENTADN 2610>XP_005264062 Length = 3232 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 1 ENTTDN 6 ENT DN Sbjct: 2701 ENTADN 2706>XP_005264061 Length = 3232 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 1 ENTTDN 6 ENT DN Sbjct: 2701 ENTADN 2706>XP_005264060 Length = 3250 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 1 ENTTDN 6 ENT DN Sbjct: 2727 ENTADN 2732>XP_005264059 Length = 3258 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 1 ENTTDN 6 ENT DN Sbjct: 2727 ENTADN 2732>XP_005264497 Length = 730 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ENTTDNSSA 9 E TT+NS++ Sbjct: 215 EKTTNNSTS 223>XP_005264496 Length = 739 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ENTTDNSSA 9 E TT+NS++ Sbjct: 96 EKTTNNSTS 104Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.268 0.0878 0.201 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 591,600 Number of extensions: 1389 Number of successful extensions: 68 Number of sequences better than 10000.0: 68 Number of HSP's gapped: 68 Number of HSP's successfully gapped: 68 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 19 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (14.3 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |