Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005742 18 1135 NP_671714 18 1135 XP_006715890 18 1135 XP_005250160 18 1135 XP_005250159 18 1135 NP_037368 15 9605 NP_003423 15 9605 NP_958843 15 9605 XP_006719710 15 9605 XP_006719709 15 9605 XP_006719708 15 9605 XP_006719707 15 9605 XP_006719706 15 9605 XP_005248422 15 9605 XP_005248419 15 9605 XP_005248420 15 9605 XP_005248418 15 9605 XP_005248417 15 9605 XP_005248416 15 9605 NP_982279 15 9605>NP_005742 Length = 3907 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ENIASSKQA 9 EN ASSKQA Sbjct: 1469 ENTASSKQA 1477>NP_671714 Length = 3899 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ENIASSKQA 9 EN ASSKQA Sbjct: 1469 ENTASSKQA 1477>XP_006715890 Length = 3860 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ENIASSKQA 9 EN ASSKQA Sbjct: 1469 ENTASSKQA 1477>XP_005250160 Length = 3939 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ENIASSKQA 9 EN ASSKQA Sbjct: 1469 ENTASSKQA 1477>XP_005250159 Length = 3952 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ENIASSKQA 9 EN ASSKQA Sbjct: 1469 ENTASSKQA 1477>NP_037368 Length = 475 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ENIASSKQ 8 EN+ASS Q Sbjct: 72 ENLASSLQ 79>NP_003423 Length = 589 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ENIASSKQA 9 E +AS+KQ+ Sbjct: 188 EEVASAKQS 196>NP_958843 Length = 684 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 NIASSKQ 8 NIA SKQ Sbjct: 269 NIAKSKQ 275>XP_006719710 Length = 523 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 NIASSKQ 8 NIA SKQ Sbjct: 108 NIAKSKQ 114>XP_006719709 Length = 632 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 NIASSKQ 8 NIA SKQ Sbjct: 269 NIAKSKQ 275>XP_006719708 Length = 634 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 NIASSKQ 8 NIA SKQ Sbjct: 269 NIAKSKQ 275>XP_006719707 Length = 682 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 NIASSKQ 8 NIA SKQ Sbjct: 269 NIAKSKQ 275>XP_006719706 Length = 684 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 NIASSKQ 8 NIA SKQ Sbjct: 269 NIAKSKQ 275>XP_005248422 Length = 589 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ENIASSKQA 9 E +AS+KQ+ Sbjct: 188 EEVASAKQS 196>XP_005248419 Length = 623 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ENIASSKQA 9 E +AS+KQ+ Sbjct: 188 EEVASAKQS 196>XP_005248420 Length = 623 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ENIASSKQA 9 E +AS+KQ+ Sbjct: 188 EEVASAKQS 196>XP_005248418 Length = 623 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ENIASSKQA 9 E +AS+KQ+ Sbjct: 188 EEVASAKQS 196>XP_005248417 Length = 623 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ENIASSKQA 9 E +AS+KQ+ Sbjct: 188 EEVASAKQS 196>XP_005248416 Length = 623 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ENIASSKQA 9 E +AS+KQ+ Sbjct: 188 EEVASAKQS 196>NP_982279 Length = 367 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ENIASSKQA 9 E ASSK+A Sbjct: 349 EQFASSKEA 357Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.281 0.0951 0.202 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 268,265 Number of extensions: 316 Number of successful extensions: 20 Number of sequences better than 10000.0: 20 Number of HSP's gapped: 20 Number of HSP's successfully gapped: 20 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 18 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (14.7 bits) S2: 28 (15.4 bits)
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |