Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_733751 20 390 XP_006716142 20 390 XP_005250088 20 390 XP_006716141 20 390 XP_005250085 20 390 XP_006716140 20 390 XP_005250084 20 390 XP_005250083 20 390 XP_005250082 20 390 NP_689777 16 5631 NP_060360 16 5631 NP_116753 16 5631 NP_116754 16 5631 NP_056058 16 5631 NP_001265548 16 5631 NP_116755 16 5631 NP_116749 16 5631 NP_001161834 16 5631 NP_001161832 16 5631 NP_116750 16 5631 NP_001161833 16 5631 NP_116751 16 5631 NP_001161835 16 5631 NP_055337 16 5631 XP_006716574 16 5631 XP_006716573 16 5631 XP_005250858 16 5631 XP_005250857 16 5631 NP_001177203 16 7355 NP_079409 16 7355 XP_005264631 16 7355 XP_005264630 16 7355 XP_005264629 16 7355 NP_001188413 15 9605 NP_116023 15 9605 NP_690577 15 9605 NP_001186189 15 9605 NP_659471 15 9605 NP_689500 15 9605 NP_001106997 15 9605 NP_001026873 15 9605 NP_068834 15 9605 NP_066278 15 9605 NP_001258662 15 9605 XP_005256385 15 9605 XP_006721400 15 9605 XP_005256381 15 9605 XP_005251676 15 9605 XP_005250186 15 9605 XP_006715638 15 9605 XP_005267216 15 9605 XP_006713274 15 9605 XP_005265300 15 9605 XP_005265299 15 9605 XP_005265298 15 9605 XP_006713273 15 9605 XP_005265297 15 9605 XP_006713231 15 9605 XP_006713229 15 9605 XP_005244996 15 9605 NP_115521 15 9605>NP_733751 Length = 4911 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ENDTMLNAQ 9 ENDTM NAQ Sbjct: 1625 ENDTMSNAQ 1633>XP_006716142 Length = 4927 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ENDTMLNAQ 9 ENDTM NAQ Sbjct: 1642 ENDTMSNAQ 1650>XP_005250088 Length = 4928 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ENDTMLNAQ 9 ENDTM NAQ Sbjct: 1642 ENDTMSNAQ 1650>XP_006716141 Length = 4959 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ENDTMLNAQ 9 ENDTM NAQ Sbjct: 1642 ENDTMSNAQ 1650>XP_005250085 Length = 4979 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ENDTMLNAQ 9 ENDTM NAQ Sbjct: 1642 ENDTMSNAQ 1650>XP_006716140 Length = 4982 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ENDTMLNAQ 9 ENDTM NAQ Sbjct: 1642 ENDTMSNAQ 1650>XP_005250084 Length = 4982 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ENDTMLNAQ 9 ENDTM NAQ Sbjct: 1642 ENDTMSNAQ 1650>XP_005250083 Length = 4982 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ENDTMLNAQ 9 ENDTM NAQ Sbjct: 1641 ENDTMSNAQ 1649>XP_005250082 Length = 4983 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ENDTMLNAQ 9 ENDTM NAQ Sbjct: 1642 ENDTMSNAQ 1650>NP_689777 Length = 3997 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ENDTMLNAQ 9 EN+T+LN + Sbjct: 619 ENETILNPE 627>NP_060360 Length = 4022 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ENDTMLNAQ 9 EN+T+LN + Sbjct: 619 ENETILNPE 627>NP_116753 Length = 1037 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ENDTMLNAQ 9 +NDT +NA+ Sbjct: 723 DNDTGMNAE 731>NP_116754 Length = 1048 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ENDTMLNAQ 9 +NDT +NA+ Sbjct: 734 DNDTGMNAE 742>NP_056058 Length = 863 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ENDTMLNAQ 9 EN+T+LN + Sbjct: 619 ENETILNPE 627>NP_001265548 Length = 1037 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ENDTMLNAQ 9 +NDT +NA+ Sbjct: 723 DNDTGMNAE 731>NP_116755 Length = 1340 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ENDTMLNAQ 9 +NDT +NA+ Sbjct: 734 DNDTGMNAE 742>NP_116749 Length = 1025 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ENDTMLNAQ 9 +NDT +NA+ Sbjct: 702 DNDTGMNAE 710>NP_001161834 Length = 1310 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ENDTMLNAQ 9 +NDT +NA+ Sbjct: 702 DNDTGMNAE 710>NP_001161832 Length = 1339 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ENDTMLNAQ 9 +NDT +NA+ Sbjct: 702 DNDTGMNAE 710>NP_116750 Length = 1347 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ENDTMLNAQ 9 +NDT +NA+ Sbjct: 702 DNDTGMNAE 710>NP_001161833 Length = 1065 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ENDTMLNAQ 9 +NDT +NA+ Sbjct: 702 DNDTGMNAE 710>NP_116751 Length = 1337 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ENDTMLNAQ 9 +NDT +NA+ Sbjct: 702 DNDTGMNAE 710>NP_001161835 Length = 1329 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ENDTMLNAQ 9 +NDT +NA+ Sbjct: 702 DNDTGMNAE 710>NP_055337 Length = 1021 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ENDTMLNAQ 9 +NDT +NA+ Sbjct: 702 DNDTGMNAE 710>XP_006716574 Length = 968 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ENDTMLNAQ 9 EN+T+LN + Sbjct: 619 ENETILNPE 627>XP_006716573 Length = 1776 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ENDTMLNAQ 9 EN+T+LN + Sbjct: 619 ENETILNPE 627>XP_005250858 Length = 4022 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ENDTMLNAQ 9 EN+T+LN + Sbjct: 619 ENETILNPE 627>XP_005250857 Length = 4022 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ENDTMLNAQ 9 EN+T+LN + Sbjct: 619 ENETILNPE 627>NP_001177203 Length = 927 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 ENDTMLNAQ 9 END NAQ Sbjct: 747 ENDIFRNAQ 755>NP_079409 Length = 843 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 ENDTMLNAQ 9 END NAQ Sbjct: 663 ENDIFRNAQ 671>XP_005264631 Length = 926 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 ENDTMLNAQ 9 END NAQ Sbjct: 746 ENDIFRNAQ 754>XP_005264630 Length = 953 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 ENDTMLNAQ 9 END NAQ Sbjct: 746 ENDIFRNAQ 754>XP_005264629 Length = 954 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 ENDTMLNAQ 9 END NAQ Sbjct: 747 ENDIFRNAQ 755>NP_001188413 Length = 672 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 ENDTML 6 ENDT+L Sbjct: 267 ENDTLL 272>NP_116023 Length = 1089 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 ENDTML 6 ENDT+L Sbjct: 267 ENDTLL 272>NP_690577 Length = 672 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 ENDTML 6 ENDT+L Sbjct: 267 ENDTLL 272>NP_001186189 Length = 470 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 ENDTMLNAQ 9 END +N+Q Sbjct: 18 ENDPSVNSQ 26>NP_659471 Length = 470 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 ENDTMLNAQ 9 END +N+Q Sbjct: 18 ENDPSVNSQ 26>NP_689500 Length = 539 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 ENDTMLNAQ 9 END NAQ Sbjct: 294 ENDKKQNAQ 302>NP_001106997 Length = 614 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 ENDTMLNAQ 9 END NAQ Sbjct: 369 ENDKKQNAQ 377>NP_001026873 Length = 266 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 ENDTMLN 7 END +LN Sbjct: 192 ENDILLN 198>NP_068834 Length = 450 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 ENDTML 6 ENDT+L Sbjct: 402 ENDTLL 407>NP_066278 Length = 725 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 NDTMLN 7 NDT+LN Sbjct: 629 NDTVLN 634>NP_001258662 Length = 689 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 NDTMLN 7 NDT+LN Sbjct: 593 NDTVLN 598>XP_005256385 Length = 400 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 ENDTMLNAQ 9 END NAQ Sbjct: 155 ENDKKQNAQ 163>XP_006721400 Length = 539 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 ENDTMLNAQ 9 END NAQ Sbjct: 294 ENDKKQNAQ 302>XP_005256381 Length = 597 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 ENDTMLNAQ 9 END NAQ Sbjct: 352 ENDKKQNAQ 360>XP_005251676 Length = 1089 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 ENDTML 6 ENDT+L Sbjct: 267 ENDTLL 272>XP_005250186 Length = 332 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 ENDTML 6 ENDT+L Sbjct: 284 ENDTLL 289>XP_006715638 Length = 745 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 NDTMLNAQ 9 NDT NAQ Sbjct: 253 NDTNQNAQ 260>XP_005267216 Length = 745 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 NDTMLNAQ 9 NDT NAQ Sbjct: 253 NDTNQNAQ 260>XP_006713274 Length = 193 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 ENDTMLN 7 END +LN Sbjct: 119 ENDILLN 125>XP_005265300 Length = 217 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 ENDTMLN 7 END +LN Sbjct: 143 ENDILLN 149>XP_005265299 Length = 217 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 ENDTMLN 7 END +LN Sbjct: 143 ENDILLN 149>XP_005265298 Length = 217 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 ENDTMLN 7 END +LN Sbjct: 143 ENDILLN 149>XP_006713273 Length = 249 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 ENDTMLN 7 END +LN Sbjct: 175 ENDILLN 181>XP_005265297 Length = 263 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 ENDTMLN 7 END +LN Sbjct: 189 ENDILLN 195>XP_006713231 Length = 625 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 NDTMLN 7 NDT+LN Sbjct: 529 NDTVLN 534>XP_006713229 Length = 680 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 NDTMLN 7 NDT+LN Sbjct: 584 NDTVLN 589>XP_005244996 Length = 470 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 ENDTMLNAQ 9 END +N+Q Sbjct: 18 ENDPSVNSQ 26>NP_115521 Length = 745 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 NDTMLNAQ 9 NDT NAQ Sbjct: 253 NDTNQNAQ 260Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.298 0.112 0.281 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 526,973 Number of extensions: 1035 Number of successful extensions: 61 Number of sequences better than 10000.0: 61 Number of HSP's gapped: 61 Number of HSP's successfully gapped: 61 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.2 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |