Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_006715 19 665 NP_005913 19 665 XP_005267046 19 665 XP_005267045 19 665 NP_056065 17 2528 NP_001003800 17 2528 NP_003322 17 4312 NP_002635 16 5631 XP_005273220 16 5631 NP_001243143 16 7355 NP_689509 16 7355 NP_001243142 16 7355 NP_000693 16 7355 NP_001153705 16 7355 NP_000692 16 7355 NP_001153706 16 7355 NP_056366 16 7355 XP_005259010 16 7355 XP_005265092 16 7355 XP_005265091 16 7355 XP_006710718 16 7355 NP_001005283 15 9605 NP_005087 15 9605 NP_008877 15 9605 NP_998821 15 9605 NP_001164633 15 9605 NP_066022 15 9605 NP_963893 15 9605 NP_003119 15 9605 XP_005262367 15 9605 XP_006724778 15 9605 XP_005262366 15 9605 XP_006723369 15 9605 XP_005274250 15 9605 XP_006718734 15 9605 XP_006718733 15 9605 XP_005274249 15 9605 XP_006718732 15 9605 XP_005264575 15 9605 XP_006712150 15 9605 XP_005264574 15 9605 NP_842565 15 9605>NP_006715 Length = 1558 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ENDRLVSIA 9 ENDRL SIA Sbjct: 1181 ENDRLASIA 1189>NP_005913 Length = 1608 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ENDRLVSIA 9 ENDRL SIA Sbjct: 1231 ENDRLASIA 1239>XP_005267046 Length = 1554 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ENDRLVSIA 9 ENDRL SIA Sbjct: 1177 ENDRLASIA 1185>XP_005267045 Length = 1604 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ENDRLVSIA 9 ENDRL SIA Sbjct: 1227 ENDRLASIA 1235>NP_056065 Length = 824 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ENDRLVSIA 9 EN+RL S+A Sbjct: 138 ENERLASVA 146>NP_001003800 Length = 855 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ENDRLVSIA 9 EN+RL S+A Sbjct: 138 ENERLASVA 146>NP_003322 Length = 1187 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ENDRLVSI 8 +NDRLV I Sbjct: 1032 DNDRLVKI 1039>NP_002635 Length = 764 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ENDRLVSI 8 EN RLVS+ Sbjct: 522 ENSRLVSL 529>XP_005273220 Length = 773 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ENDRLVSI 8 EN RLVS+ Sbjct: 522 ENSRLVSL 529>NP_001243143 Length = 1026 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 NDRLVSIA 9 N+RL+S+A Sbjct: 849 NERLISMA 856>NP_689509 Length = 1013 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 NDRLVSIA 9 N+RL+S+A Sbjct: 836 NERLISMA 843>NP_001243142 Length = 1024 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 NDRLVSIA 9 N+RL+S+A Sbjct: 847 NERLISMA 854>NP_000693 Length = 1020 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 NDRLVSIA 9 N+RL+S+A Sbjct: 843 NERLISMA 850>NP_001153705 Length = 1023 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 NDRLVSIA 9 N+RL+S+A Sbjct: 846 NERLISMA 853>NP_000692 Length = 1023 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 NDRLVSIA 9 N+RL+S+A Sbjct: 846 NERLISMA 853>NP_001153706 Length = 992 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 NDRLVSIA 9 N+RL+S+A Sbjct: 815 NERLISMA 822>NP_056366 Length = 629 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ENDRLVSIA 9 + DRLVSI+ Sbjct: 246 KQDRLVSIS 254>XP_005259010 Length = 1261 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 NDRLVSIA 9 N+RL+S+A Sbjct: 836 NERLISMA 843>XP_005265092 Length = 451 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ENDRLVSIA 9 + DRLVSI+ Sbjct: 68 KQDRLVSIS 76>XP_005265091 Length = 566 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ENDRLVSIA 9 + DRLVSI+ Sbjct: 183 KQDRLVSIS 191>XP_006710718 Length = 992 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 NDRLVSIA 9 N+RL+S+A Sbjct: 815 NERLISMA 822>NP_001005283 Length = 314 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 ENDRLVSI 8 E DR+VS+ Sbjct: 269 EGDRVVSV 276>NP_005087 Length = 1370 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 ENDRLVSI 8 EN+R+V+I Sbjct: 1148 ENNRMVNI 1155>NP_008877 Length = 2390 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 ENDRLVS 7 EN RLVS Sbjct: 443 ENQRLVS 449>NP_998821 Length = 491 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 ENDRLVS 7 EN RLVS Sbjct: 163 ENSRLVS 169>NP_001164633 Length = 1358 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 ENDRLVSI 8 EN+R+V+I Sbjct: 1136 ENNRMVNI 1143>NP_066022 Length = 2564 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 ENDRLVS 7 EN RLVS Sbjct: 447 ENQRLVS 453>NP_963893 Length = 1370 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 ENDRLVSI 8 EN+R+V+I Sbjct: 1148 ENNRMVNI 1155>NP_003119 Length = 2364 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 ENDRLVS 7 EN RLVS Sbjct: 440 ENQRLVS 446>XP_005262367 Length = 1358 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 ENDRLVSI 8 EN+R+V+I Sbjct: 1136 ENNRMVNI 1143>XP_006724778 Length = 1370 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 ENDRLVSI 8 EN+R+V+I Sbjct: 1148 ENNRMVNI 1155>XP_005262366 Length = 1370 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 ENDRLVSI 8 EN+R+V+I Sbjct: 1148 ENNRMVNI 1155>XP_006723369 Length = 2394 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 ENDRLVS 7 EN RLVS Sbjct: 447 ENQRLVS 453>XP_005274250 Length = 2390 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 ENDRLVS 7 EN RLVS Sbjct: 443 ENQRLVS 449>XP_006718734 Length = 2390 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 ENDRLVS 7 EN RLVS Sbjct: 443 ENQRLVS 449>XP_006718733 Length = 2390 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 ENDRLVS 7 EN RLVS Sbjct: 443 ENQRLVS 449>XP_005274249 Length = 2390 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 ENDRLVS 7 EN RLVS Sbjct: 443 ENQRLVS 449>XP_006718732 Length = 2397 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 ENDRLVS 7 EN RLVS Sbjct: 450 ENQRLVS 456>XP_005264575 Length = 2351 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 ENDRLVS 7 EN RLVS Sbjct: 427 ENQRLVS 433>XP_006712150 Length = 2364 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 ENDRLVS 7 EN RLVS Sbjct: 440 ENQRLVS 446>XP_005264574 Length = 2364 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 ENDRLVS 7 EN RLVS Sbjct: 440 ENQRLVS 446>NP_842565 Length = 2155 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 ENDRLVS 7 EN RLVS Sbjct: 427 ENQRLVS 433Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.312 0.130 0.315 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 479,043 Number of extensions: 798 Number of successful extensions: 42 Number of sequences better than 10000.0: 42 Number of HSP's gapped: 42 Number of HSP's successfully gapped: 42 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.5 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |