Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005179 20 509 NP_056377 18 1482 NP_061939 18 1935 NP_065915 17 2528 XP_005246765 17 2528 NP_003676 17 3301 XP_005259725 17 3301 NP_115979 17 4312 NP_001005366 17 4312 XP_005254013 17 4312 XP_005254012 17 4312 XP_005254011 17 4312 NP_055448 17 4312 NP_001275582 16 5631 NP_004850 16 5631 NP_009029 16 5631 NP_001826 16 5631 NP_001005333 16 5631 NP_001005332 16 5631 XP_006724391 16 5631 XP_005261338 16 5631 XP_005277858 16 5631 XP_006724390 16 5631 XP_006724389 16 5631 XP_005277857 16 5631 XP_005257069 16 5631 NP_008917 16 5631 NP_079197 16 7355 NP_803879 16 7355 NP_803881 16 7355 NP_001258992 16 7355 NP_110428 16 7355 NP_001229291 16 7355 NP_001258991 16 7355 NP_001092270 16 7355 NP_001258990 16 7355 NP_001099001 16 7355 NP_065870 16 7355 NP_001156001 16 7355 XP_005262260 16 7355 XP_005262259 16 7355 XP_006724671 16 7355 XP_006724670 16 7355 XP_005248808 16 7355 XP_005248807 16 7355 XP_005248806 16 7355 XP_005248805 16 7355 XP_005248804 16 7355 XP_005248803 16 7355 XP_005248802 16 7355 XP_005248801 16 7355 XP_005248800 16 7355 NP_001245 15 9605 NP_477352 15 9605 NP_002641 15 9605 XP_005261692 15 9605 XP_005261691 15 9605 XP_006717377 15 9605 XP_006717376 15 9605 XP_005272289 15 9605 XP_006717375 15 9605 XP_006716779 15 9605 NP_003925 15 9605 NP_000929 15 9605>NP_005179 Length = 906 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 EMVKNILRE 9 EM KNILRE Sbjct: 886 EMAKNILRE 894>NP_056377 Length = 489 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 EMVKNILRE 9 E VKNI+RE Sbjct: 191 EAVKNIIRE 199>NP_061939 Length = 1249 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 EMVKNILRE 9 EMVK ILRE Sbjct: 1045 EMVKVILRE 1053>NP_065915 Length = 653 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 EMVKNILRE 9 EMV NILR+ Sbjct: 247 EMVGNILRD 255>XP_005246765 Length = 653 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 EMVKNILRE 9 EMV NILR+ Sbjct: 247 EMVGNILRD 255>NP_003676 Length = 711 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 EMVKNILRE 9 EMV +ILRE Sbjct: 297 EMVMDILRE 305>XP_005259725 Length = 747 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 EMVKNILRE 9 EMV +ILRE Sbjct: 297 EMVMDILRE 305>NP_115979 Length = 1336 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 EMVKNILRE 9 E VKN+L+E Sbjct: 546 EGVKNVLKE 554>NP_001005366 Length = 1265 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 EMVKNILRE 9 E VKN+L+E Sbjct: 515 EGVKNVLKE 523>XP_005254013 Length = 1299 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 EMVKNILRE 9 E VKN+L+E Sbjct: 509 EGVKNVLKE 517>XP_005254012 Length = 1305 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 EMVKNILRE 9 E VKN+L+E Sbjct: 515 EGVKNVLKE 523>XP_005254011 Length = 1334 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 EMVKNILRE 9 E VKN+L+E Sbjct: 546 EGVKNVLKE 554>NP_055448 Length = 1173 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 EMVKNILRE 9 ++ KNILRE Sbjct: 518 KLYKNILRE 526>NP_001275582 Length = 1679 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 EMVKNILRE 9 E VKN L+E Sbjct: 761 ERVKNFLKE 769>NP_004850 Length = 1675 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 EMVKNILRE 9 E VKN L+E Sbjct: 757 ERVKNFLKE 765>NP_009029 Length = 1640 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 EMVKNILRE 9 E VKN L+E Sbjct: 757 ERVKNFLKE 765>NP_001826 Length = 1583 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 EMVKNILRE 9 E VKN L+E Sbjct: 757 ERVKNFLKE 765>NP_001005333 Length = 834 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 EMVKNILRE 9 EM+++I+RE Sbjct: 552 EMLRDIIRE 560>NP_001005332 Length = 778 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 EMVKNILRE 9 EM+++I+RE Sbjct: 496 EMLRDIIRE 504>XP_006724391 Length = 1567 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 EMVKNILRE 9 E VKN L+E Sbjct: 778 ERVKNFLKE 786>XP_005261338 Length = 1570 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 EMVKNILRE 9 E VKN L+E Sbjct: 778 ERVKNFLKE 786>XP_005277858 Length = 1604 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 EMVKNILRE 9 E VKN L+E Sbjct: 778 ERVKNFLKE 786>XP_006724390 Length = 1623 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 EMVKNILRE 9 E VKN L+E Sbjct: 740 ERVKNFLKE 748>XP_006724389 Length = 1653 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 EMVKNILRE 9 E VKN L+E Sbjct: 778 ERVKNFLKE 786>XP_005277857 Length = 1661 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 EMVKNILRE 9 E VKN L+E Sbjct: 778 ERVKNFLKE 786>XP_005257069 Length = 1682 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 EMVKNILRE 9 E VKN L+E Sbjct: 757 ERVKNFLKE 765>NP_008917 Length = 778 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 EMVKNILRE 9 EM+++I+RE Sbjct: 496 EMLRDIIRE 504>NP_079197 Length = 589 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 EMVKNILRE 9 EMVKN+ E Sbjct: 462 EMVKNLRME 470>NP_803879 Length = 741 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 EMVKNILRE 9 +M+K+++RE Sbjct: 438 DMLKDVIRE 446>NP_803881 Length = 739 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 EMVKNILRE 9 +M+K+++RE Sbjct: 438 DMLKDVIRE 446>NP_001258992 Length = 741 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 EMVKNILRE 9 +M+K+++RE Sbjct: 438 DMLKDVIRE 446>NP_110428 Length = 741 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 EMVKNILRE 9 +M+K+++RE Sbjct: 438 DMLKDVIRE 446>NP_001229291 Length = 757 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 EMVKNILRE 9 +M+K+++RE Sbjct: 438 DMLKDVIRE 446>NP_001258991 Length = 741 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 EMVKNILRE 9 +M+K+++RE Sbjct: 438 DMLKDVIRE 446>NP_001092270 Length = 739 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 EMVKNILRE 9 +M+K+++RE Sbjct: 438 DMLKDVIRE 446>NP_001258990 Length = 757 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 EMVKNILRE 9 +M+K+++RE Sbjct: 438 DMLKDVIRE 446>NP_001099001 Length = 1319 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 EMVKNILR 8 EM+ N+LR Sbjct: 1257 EMIHNLLR 1264>NP_065870 Length = 1302 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 EMVKNILR 8 EM+ N+LR Sbjct: 1240 EMIHNLLR 1247>NP_001156001 Length = 1515 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 EMVKNILR 8 EM+ N+LR Sbjct: 1453 EMIHNLLR 1460>XP_005262260 Length = 574 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 EMVKNILRE 9 EMVKN+ E Sbjct: 447 EMVKNLRME 455>XP_005262259 Length = 595 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 EMVKNILRE 9 EMVKN+ E Sbjct: 462 EMVKNLRME 470>XP_006724671 Length = 741 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 EMVKNILRE 9 +M+K+++RE Sbjct: 438 DMLKDVIRE 446>XP_006724670 Length = 741 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 EMVKNILRE 9 +M+K+++RE Sbjct: 438 DMLKDVIRE 446>XP_005248808 Length = 1121 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 EMVKNILR 8 EM+ N+LR Sbjct: 1059 EMIHNLLR 1066>XP_005248807 Length = 1182 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 EMVKNILR 8 EM+ N+LR Sbjct: 1120 EMIHNLLR 1127>XP_005248806 Length = 1317 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 EMVKNILR 8 EM+ N+LR Sbjct: 1255 EMIHNLLR 1262>XP_005248805 Length = 1345 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 EMVKNILR 8 EM+ N+LR Sbjct: 1283 EMIHNLLR 1290>XP_005248804 Length = 1378 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 EMVKNILR 8 EM+ N+LR Sbjct: 1316 EMIHNLLR 1323>XP_005248803 Length = 1455 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 EMVKNILR 8 EM+ N+LR Sbjct: 1393 EMIHNLLR 1400>XP_005248802 Length = 1515 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 EMVKNILR 8 EM+ N+LR Sbjct: 1453 EMIHNLLR 1460>XP_005248801 Length = 1541 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 EMVKNILR 8 EM+ N+LR Sbjct: 1479 EMIHNLLR 1486>XP_005248800 Length = 1541 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 EMVKNILR 8 EM+ N+LR Sbjct: 1479 EMIHNLLR 1486>NP_001245 Length = 560 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 EMVKNILRE 9 ++++N LRE Sbjct: 180 DVIRNFLRE 188>NP_477352 Length = 2102 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 VKNILRE 9 ++N+LRE Sbjct: 1370 IRNVLRE 1376>NP_002641 Length = 854 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 VKNILRE 9 ++N+LRE Sbjct: 122 IRNVLRE 128>XP_005261692 Length = 1854 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 VKNILRE 9 ++N+LRE Sbjct: 1398 IRNVLRE 1404>XP_005261691 Length = 2099 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 VKNILRE 9 ++N+LRE Sbjct: 1367 IRNVLRE 1373>XP_006717377 Length = 377 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 EMVKNILRE 9 EMV I+RE Sbjct: 31 EMVLEIIRE 39>XP_006717376 Length = 485 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 EMVKNILRE 9 EMV I+RE Sbjct: 139 EMVLEIIRE 147>XP_005272289 Length = 548 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 EMVKNILRE 9 EMV I+RE Sbjct: 226 EMVLEIIRE 234>XP_006717375 Length = 571 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 EMVKNILRE 9 EMV I+RE Sbjct: 225 EMVLEIIRE 233>XP_006716779 Length = 2399 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 KNILRE 9 KN+LRE Sbjct: 1156 KNVLRE 1161>NP_003925 Length = 572 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 EMVKNILRE 9 EMV I+RE Sbjct: 226 EMVLEIIRE 234>NP_000929 Length = 1174 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 MVKNILRE 9 M KN+L+E Sbjct: 407 MFKNLLKE 414Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.318 0.135 0.327 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 414,417 Number of extensions: 780 Number of successful extensions: 64 Number of sequences better than 10000.0: 64 Number of HSP's gapped: 64 Number of HSP's successfully gapped: 64 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.7 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |