Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005742 19 665 NP_671714 19 665 XP_006715890 19 665 XP_005250160 19 665 XP_005250159 19 665 NP_054777 17 3301 NP_055907 17 4312 NP_001186217 17 4312 NP_001186216 17 4312 NP_001186215 17 4312 NP_001186214 17 4312 NP_001008489 17 4312 XP_005255242 17 4312 XP_005255241 17 4312 XP_005255240 17 4312 XP_005255239 17 4312 XP_005248250 16 5631 NP_444270 16 5631 NP_001276089 16 7355 NP_005922 16 7355 NP_000238 16 7355 NP_001276081 16 7355 NP_001170990 16 7355 NP_001276082 16 7355 NP_055625 16 7355 XP_006726158 16 7355 XP_006726065 16 7355 XP_006711734 16 7355 XP_006711733 16 7355 XP_006711732 16 7355 XP_006711731 16 7355 XP_006711730 16 7355 XP_006711729 16 7355 XP_005245695 16 7355 NP_001180466 15 9605 NP_689663 15 9605 NP_001243475 15 9605 NP_057279 15 9605 NP_001271188 15 9605 XP_006720462 15 9605 XP_006720461 15 9605 XP_005254223 15 9605 XP_005271964 15 9605 XP_006714621 15 9605 XP_006713927 15 9605 NP_660334 15 9605 NP_689761 15 9605 NP_115976 15 9605 NP_001180467 15 9605 NP_060950 15 9605>NP_005742 Length = 3907 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 EMSQNIETM 9 EMSQ IETM Sbjct: 673 EMSQKIETM 681>NP_671714 Length = 3899 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 EMSQNIETM 9 EMSQ IETM Sbjct: 673 EMSQKIETM 681>XP_006715890 Length = 3860 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 EMSQNIETM 9 EMSQ IETM Sbjct: 673 EMSQKIETM 681>XP_005250160 Length = 3939 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 EMSQNIETM 9 EMSQ IETM Sbjct: 673 EMSQKIETM 681>XP_005250159 Length = 3952 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 EMSQNIETM 9 EMSQ IETM Sbjct: 673 EMSQKIETM 681>NP_054777 Length = 423 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 EMSQNIETM 9 EMSQ +E+M Sbjct: 78 EMSQRLESM 86>NP_055907 Length = 3661 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 MSQNIET 8 M+QNIET Sbjct: 2375 MTQNIET 2381>NP_001186217 Length = 241 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 MSQNIETM 9 MSQN+E M Sbjct: 211 MSQNLEPM 218>NP_001186216 Length = 241 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 MSQNIETM 9 MSQN+E M Sbjct: 211 MSQNLEPM 218>NP_001186215 Length = 241 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 MSQNIETM 9 MSQN+E M Sbjct: 211 MSQNLEPM 218>NP_001186214 Length = 241 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 MSQNIETM 9 MSQN+E M Sbjct: 211 MSQNLEPM 218>NP_001008489 Length = 241 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 MSQNIETM 9 MSQN+E M Sbjct: 211 MSQNLEPM 218>XP_005255242 Length = 3609 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 MSQNIET 8 M+QNIET Sbjct: 2323 MTQNIET 2329>XP_005255241 Length = 3637 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 MSQNIET 8 M+QNIET Sbjct: 2351 MTQNIET 2357>XP_005255240 Length = 3663 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 MSQNIET 8 M+QNIET Sbjct: 2377 MTQNIET 2383>XP_005255239 Length = 3689 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 MSQNIET 8 M+QNIET Sbjct: 2403 MTQNIET 2409>XP_005248250 Length = 1074 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 EMSQNIET 8 +MS NIET Sbjct: 834 DMSPNIET 841>NP_444270 Length = 1074 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 EMSQNIET 8 +MS NIET Sbjct: 834 DMSPNIET 841>NP_001276089 Length = 351 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 MSQNIET 8 +SQN+ET Sbjct: 109 LSQNLET 115>NP_005922 Length = 383 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 MSQNIET 8 +SQN+ET Sbjct: 141 LSQNLET 147>NP_000238 Length = 383 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 MSQNIET 8 +SQN+ET Sbjct: 141 LSQNLET 147>NP_001276081 Length = 235 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 MSQNIET 8 +SQN+ET Sbjct: 44 LSQNLET 50>NP_001170990 Length = 332 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 MSQNIET 8 +SQN+ET Sbjct: 141 LSQNLET 147>NP_001276082 Length = 235 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 MSQNIET 8 +SQN+ET Sbjct: 44 LSQNLET 50>NP_055625 Length = 3117 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 EMSQNIET 8 E+SQ++ET Sbjct: 2107 ELSQDLET 2114>XP_006726158 Length = 351 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 MSQNIET 8 +SQN+ET Sbjct: 109 LSQNLET 115>XP_006726065 Length = 351 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 MSQNIET 8 +SQN+ET Sbjct: 109 LSQNLET 115>XP_006711734 Length = 3136 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 EMSQNIET 8 E+SQ++ET Sbjct: 2126 ELSQDLET 2133>XP_006711733 Length = 3137 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 EMSQNIET 8 E+SQ++ET Sbjct: 2127 ELSQDLET 2134>XP_006711732 Length = 3154 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 EMSQNIET 8 E+SQ++ET Sbjct: 2144 ELSQDLET 2151>XP_006711731 Length = 3157 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 EMSQNIET 8 E+SQ++ET Sbjct: 2147 ELSQDLET 2154>XP_006711730 Length = 3157 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 EMSQNIET 8 E+SQ++ET Sbjct: 2147 ELSQDLET 2154>XP_006711729 Length = 3158 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 EMSQNIET 8 E+SQ++ET Sbjct: 2148 ELSQDLET 2155>XP_005245695 Length = 3158 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 EMSQNIET 8 E+SQ++ET Sbjct: 2148 ELSQDLET 2155>NP_001180466 Length = 210 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 EMSQNIETM 9 EM+QNI M Sbjct: 47 EMTQNIYQM 55>NP_689663 Length = 368 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 EMSQNIETM 9 +M+QNI+ M Sbjct: 313 QMNQNIKEM 321>NP_001243475 Length = 200 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 EMSQNIETM 9 EM+QNI M Sbjct: 37 EMTQNIYQM 45>NP_057279 Length = 1780 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 EMSQNIET 8 E +QN+ET Sbjct: 543 EETQNVET 550>NP_001271188 Length = 1820 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 EMSQNIET 8 E +QN+ET Sbjct: 543 EETQNVET 550>XP_006720462 Length = 368 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 EMSQNIETM 9 +M+QNI+ M Sbjct: 313 QMNQNIKEM 321>XP_006720461 Length = 368 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 EMSQNIETM 9 +M+QNI+ M Sbjct: 313 QMNQNIKEM 321>XP_005254223 Length = 377 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 EMSQNIETM 9 +M+QNI+ M Sbjct: 322 QMNQNIKEM 330>XP_005271964 Length = 232 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 EMSQNIETM 9 ++SQNIE + Sbjct: 173 KLSQNIEIL 181>XP_006714621 Length = 368 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 EMSQNIETM 9 ++SQNIE + Sbjct: 89 KLSQNIEIL 97>XP_006713927 Length = 765 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 EMSQNIET 8 E+SQ IET Sbjct: 598 ELSQAIET 605>NP_660334 Length = 765 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 EMSQNIET 8 E+SQ IET Sbjct: 598 ELSQAIET 605>NP_689761 Length = 452 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 EMSQNIETM 9 ++SQNIE + Sbjct: 173 KLSQNIEIL 181>NP_115976 Length = 1037 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 EMSQNIETM 9 E+SQN++ + Sbjct: 710 ELSQNLQNL 718>NP_001180467 Length = 200 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 EMSQNIETM 9 EM+QNI M Sbjct: 37 EMTQNIYQM 45>NP_060950 Length = 230 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 EMSQNIETM 9 EM+QNI M Sbjct: 67 EMTQNIYQM 75Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.298 0.108 0.246 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 355,398 Number of extensions: 596 Number of successful extensions: 50 Number of sequences better than 10000.0: 50 Number of HSP's gapped: 50 Number of HSP's successfully gapped: 50 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.3 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |