Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001245210 18 1135 NP_000242 18 1135 XP_005264389 18 1135 NP_001276018 17 3301 NP_079048 17 3301 NP_001276019 17 3301 NP_001276017 17 3301 XP_006710967 17 3301 XP_005271277 17 3301 XP_005271276 17 3301 XP_005271275 17 3301 XP_005271273 17 3301 NP_004527 16 5631 NP_075043 16 5631 XP_006725522 16 5631 XP_006725521 16 5631 XP_006725519 16 5631 XP_006725518 16 5631 XP_006725517 16 5631 XP_006725516 16 5631 XP_005276859 16 5631 XP_005276858 16 5631 XP_006726285 16 5631 XP_006726284 16 5631 XP_006726283 16 5631 XP_006726282 16 5631 XP_005248581 16 5631 XP_006714693 16 5631 XP_006714692 16 5631 XP_006714691 16 5631 XP_006714690 16 5631 XP_006714689 16 5631 NP_009098 15 9605>NP_001245210 Length = 868 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 EMLETTSIL 9 EMLET SIL Sbjct: 662 EMLETASIL 670>NP_000242 Length = 934 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 EMLETTSIL 9 EMLET SIL Sbjct: 728 EMLETASIL 736>XP_005264389 Length = 921 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 EMLETTSIL 9 EMLET SIL Sbjct: 728 EMLETASIL 736>NP_001276018 Length = 1123 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 EMLETTSIL 9 EM+ETTS L Sbjct: 288 EMIETTSDL 296>NP_079048 Length = 1142 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 EMLETTSIL 9 EM+ETTS L Sbjct: 288 EMIETTSDL 296>NP_001276019 Length = 1142 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 EMLETTSIL 9 EM+ETTS L Sbjct: 288 EMIETTSDL 296>NP_001276017 Length = 1142 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 EMLETTSIL 9 EM+ETTS L Sbjct: 288 EMIETTSDL 296>XP_006710967 Length = 481 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 EMLETTSIL 9 EM+ETTS L Sbjct: 288 EMIETTSDL 296>XP_005271277 Length = 951 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 EMLETTSIL 9 EM+ETTS L Sbjct: 97 EMIETTSDL 105>XP_005271276 Length = 1067 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 EMLETTSIL 9 EM+ETTS L Sbjct: 213 EMIETTSDL 221>XP_005271275 Length = 1067 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 EMLETTSIL 9 EM+ETTS L Sbjct: 213 EMIETTSDL 221>XP_005271273 Length = 1130 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 EMLETTSIL 9 EM+ETTS L Sbjct: 288 EMIETTSDL 296>NP_004527 Length = 1403 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 EMLETTS 7 E+LETTS Sbjct: 366 ELLETTS 372>NP_075043 Length = 1241 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 EMLETTS 7 E+LETTS Sbjct: 204 ELLETTS 210>XP_006725522 Length = 765 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 EMLETTS 7 E+LETTS Sbjct: 366 ELLETTS 372>XP_006725521 Length = 792 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 EMLETTS 7 E+LETTS Sbjct: 366 ELLETTS 372>XP_006725519 Length = 1139 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 EMLETTS 7 E+LETTS Sbjct: 102 ELLETTS 108>XP_006725518 Length = 1219 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 EMLETTS 7 E+LETTS Sbjct: 182 ELLETTS 188>XP_006725517 Length = 1348 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 EMLETTS 7 E+LETTS Sbjct: 366 ELLETTS 372>XP_006725516 Length = 1352 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 EMLETTS 7 E+LETTS Sbjct: 366 ELLETTS 372>XP_005276859 Length = 765 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 EMLETTS 7 E+LETTS Sbjct: 366 ELLETTS 372>XP_005276858 Length = 792 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 EMLETTS 7 E+LETTS Sbjct: 366 ELLETTS 372>XP_006726285 Length = 1139 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 EMLETTS 7 E+LETTS Sbjct: 102 ELLETTS 108>XP_006726284 Length = 1219 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 EMLETTS 7 E+LETTS Sbjct: 182 ELLETTS 188>XP_006726283 Length = 1348 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 EMLETTS 7 E+LETTS Sbjct: 366 ELLETTS 372>XP_006726282 Length = 1352 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 EMLETTS 7 E+LETTS Sbjct: 366 ELLETTS 372>XP_005248581 Length = 765 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 EMLETTS 7 E+LETTS Sbjct: 366 ELLETTS 372>XP_006714693 Length = 792 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 EMLETTS 7 E+LETTS Sbjct: 366 ELLETTS 372>XP_006714692 Length = 1139 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 EMLETTS 7 E+LETTS Sbjct: 102 ELLETTS 108>XP_006714691 Length = 1219 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 EMLETTS 7 E+LETTS Sbjct: 182 ELLETTS 188>XP_006714690 Length = 1348 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 EMLETTS 7 E+LETTS Sbjct: 366 ELLETTS 372>XP_006714689 Length = 1352 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 EMLETTS 7 E+LETTS Sbjct: 366 ELLETTS 372>NP_009098 Length = 1325 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 EMLETTS 7 EM+ETT+ Sbjct: 284 EMIETTN 290Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.308 0.122 0.275 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 368,447 Number of extensions: 492 Number of successful extensions: 33 Number of sequences better than 10000.0: 33 Number of HSP's gapped: 33 Number of HSP's successfully gapped: 33 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.5 bits) S2: 28 (15.4 bits)
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |