Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005742 20 299 NP_671714 20 299 XP_006715890 20 299 XP_005250160 20 299 XP_005250159 20 299 NP_777613 18 1935 NP_777617 18 1935 NP_777614 18 1935 NP_005164 18 1935 NP_777618 18 1935 NP_777615 18 1935 XP_005256713 18 1935 NP_777616 18 1935 NP_000231 17 2528 NP_001257387 17 2528 NP_001089 17 2528 NP_002755 16 5631 NP_001107 16 5631 NP_787082 16 5631 NP_001034180 16 5631 NP_002756 16 5631 NP_001077086 16 5631 NP_066022 16 5631 NP_892021 16 5631 NP_055596 16 5631 XP_006723369 16 5631 XP_005255136 16 5631 XP_006716556 16 5631 XP_006716555 16 5631 XP_006716554 16 5631 XP_005270837 16 5631 XP_005270836 16 5631 NP_001136254 16 7355 NP_690864 16 7355 NP_872286 16 7355 NP_001127870 16 7355 NP_056065 16 7355 NP_003362 16 7355 NP_001003800 16 7355 NP_872282 16 7355 XP_005267777 16 7355 XP_006720219 16 7355 XP_005267773 16 7355 XP_005268396 16 7355 XP_005268394 16 7355 XP_005268395 16 7355 XP_005253685 16 7355 XP_005253684 16 7355 XP_005272270 16 7355 XP_006717340 16 7355 XP_006711391 16 7355 XP_005270794 16 7355 XP_005275799 16 7355 XP_005275797 16 7355 XP_005275798 16 7355 XP_006710032 16 7355 XP_005275796 16 7355 NP_003950 16 7355 NP_005085 15 9605 NP_950251 15 9605 NP_056315 15 9605 NP_005106 15 9605 NP_059447 15 9605 NP_001258635 15 9605 NP_003793 15 9605 XP_005261164 15 9605 XP_005261166 15 9605 XP_005261163 15 9605 XP_005251390 15 9605 XP_005251389 15 9605>NP_005742 Length = 3907 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 EMGKVVEKD 9 EMG+VVEKD Sbjct: 929 EMGEVVEKD 937>NP_671714 Length = 3899 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 EMGKVVEKD 9 EMG+VVEKD Sbjct: 929 EMGEVVEKD 937>XP_006715890 Length = 3860 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 EMGKVVEKD 9 EMG+VVEKD Sbjct: 929 EMGEVVEKD 937>XP_005250160 Length = 3939 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 EMGKVVEKD 9 EMG+VVEKD Sbjct: 929 EMGEVVEKD 937>XP_005250159 Length = 3952 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 EMGKVVEKD 9 EMG+VVEKD Sbjct: 929 EMGEVVEKD 937>NP_777613 Length = 1052 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 EMGKVVEKD 9 EMGKV+ D Sbjct: 125 EMGKVIRSD 133>NP_777617 Length = 998 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 EMGKVVEKD 9 EMGKV+ D Sbjct: 125 EMGKVIRSD 133>NP_777614 Length = 1044 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 EMGKVVEKD 9 EMGKV+ D Sbjct: 125 EMGKVIRSD 133>NP_005164 Length = 999 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 EMGKVVEKD 9 EMGKV+ D Sbjct: 125 EMGKVIRSD 133>NP_777618 Length = 1029 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 EMGKVVEKD 9 EMGKV+ D Sbjct: 125 EMGKVIRSD 133>NP_777615 Length = 1043 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 EMGKVVEKD 9 EMGKV+ D Sbjct: 125 EMGKVIRSD 133>XP_005256713 Length = 1100 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 EMGKVVEKD 9 EMGKV+ D Sbjct: 125 EMGKVIRSD 133>NP_777616 Length = 1029 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 EMGKVVEKD 9 EMGKV+ D Sbjct: 125 EMGKVIRSD 133>NP_000231 Length = 527 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 MGKVVEKD 9 +GKV EKD Sbjct: 463 LGKVTEKD 470>NP_001257387 Length = 394 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 MGKVVEKD 9 +GKV EKD Sbjct: 330 LGKVTEKD 337>NP_001089 Length = 780 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 EMGKVVEKD 9 E+GKV EK+ Sbjct: 363 EVGKVAEKE 371>NP_002755 Length = 318 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 EMGKVVEK 8 E+GKVV K Sbjct: 26 ELGKVVTK 33>NP_001107 Length = 1353 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 GKVVEKD 9 GK +EKD Sbjct: 1325 GKAIEKD 1331>NP_787082 Length = 318 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 EMGKVVEK 8 E+GKVV K Sbjct: 26 ELGKVVTK 33>NP_001034180 Length = 321 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 EMGKVVEK 8 E+GKVV K Sbjct: 26 ELGKVVTK 33>NP_002756 Length = 318 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 EMGKVVEK 8 E+GKVV K Sbjct: 26 ELGKVVTK 33>NP_001077086 Length = 1591 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 MGKVVEKD 9 +GKV+EK+ Sbjct: 1553 LGKVMEKE 1560>NP_066022 Length = 2564 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 EMGKVVEK 8 E+GK++E+ Sbjct: 306 EVGKIIER 313>NP_892021 Length = 582 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 EMGKVVEKD 9 E+ K++EKD Sbjct: 380 EVVKIIEKD 388>NP_055596 Length = 1594 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 MGKVVEKD 9 +GKV+EK+ Sbjct: 1556 LGKVMEKE 1563>XP_006723369 Length = 2394 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 EMGKVVEK 8 E+GK++E+ Sbjct: 306 EVGKIIER 313>XP_005255136 Length = 1372 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 GKVVEKD 9 GK +EKD Sbjct: 1344 GKAIEKD 1350>XP_006716556 Length = 1048 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 MGKVVEKD 9 +GKV+EK+ Sbjct: 1010 LGKVMEKE 1017>XP_006716555 Length = 1539 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 MGKVVEKD 9 +GKV+EK+ Sbjct: 1501 LGKVMEKE 1508>XP_006716554 Length = 1591 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 MGKVVEKD 9 +GKV+EK+ Sbjct: 1553 LGKVMEKE 1560>XP_005270837 Length = 376 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 EMGKVVEKD 9 E+ K++EKD Sbjct: 174 EVVKIIEKD 182>XP_005270836 Length = 376 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 EMGKVVEKD 9 E+ K++EKD Sbjct: 174 EVVKIIEKD 182>NP_001136254 Length = 1481 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 GKVVEKD 9 GKV+ KD Sbjct: 106 GKVINKD 112>NP_690864 Length = 1125 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 GKVVEKD 9 GKV+ KD Sbjct: 106 GKVINKD 112>NP_872286 Length = 443 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 EMGKVVEKD 9 +MG +VE D Sbjct: 113 DMGYIVEND 121>NP_001127870 Length = 878 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 KVVEKD 9 KVVEKD Sbjct: 721 KVVEKD 726>NP_056065 Length = 824 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 EMGKVVEKD 9 E+G V+KD Sbjct: 660 ELGPAVDKD 668>NP_003362 Length = 839 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 KVVEKD 9 KVVEKD Sbjct: 711 KVVEKD 716>NP_001003800 Length = 855 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 EMGKVVEKD 9 E+G V+KD Sbjct: 660 ELGPAVDKD 668>NP_872282 Length = 468 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 EMGKVVEKD 9 +MG +VE D Sbjct: 138 DMGYIVEND 146>XP_005267777 Length = 233 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 EMGKVVEKD 9 +MG +VE D Sbjct: 138 DMGYIVEND 146>XP_006720219 Length = 359 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 EMGKVVEKD 9 +MG +VE D Sbjct: 29 DMGYIVEND 37>XP_005267773 Length = 413 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 EMGKVVEKD 9 +MG +VE D Sbjct: 83 DMGYIVEND 91>XP_005268396 Length = 1603 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 EMGKVVEKD 9 E+G+++ KD Sbjct: 86 EVGRLISKD 94>XP_005268394 Length = 1603 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 EMGKVVEKD 9 E+G+++ KD Sbjct: 86 EVGRLISKD 94>XP_005268395 Length = 1603 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 EMGKVVEKD 9 E+G+++ KD Sbjct: 86 EVGRLISKD 94>XP_005253685 Length = 1061 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 EMGKVVEKD 9 E+G VV+K+ Sbjct: 771 ELGAVVDKE 779>XP_005253684 Length = 1073 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 EMGKVVEKD 9 E+G VV+K+ Sbjct: 783 ELGAVVDKE 791>XP_005272270 Length = 868 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 KVVEKD 9 KVVEKD Sbjct: 711 KVVEKD 716>XP_006717340 Length = 857 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 KVVEKD 9 KVVEKD Sbjct: 729 KVVEKD 734>XP_006711391 Length = 485 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 EMGKVVE 7 E+GKV+E Sbjct: 266 EVGKVIE 272>XP_005270794 Length = 1125 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 GKVVEKD 9 GKV+ KD Sbjct: 106 GKVINKD 112>XP_005275799 Length = 1680 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 EMGKVVEKD 9 E+G+++ KD Sbjct: 86 EVGRLISKD 94>XP_005275797 Length = 1680 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 EMGKVVEKD 9 E+G+++ KD Sbjct: 86 EVGRLISKD 94>XP_005275798 Length = 1680 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 EMGKVVEKD 9 E+G+++ KD Sbjct: 86 EVGRLISKD 94>XP_006710032 Length = 1694 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 EMGKVVEKD 9 E+G+++ KD Sbjct: 100 EVGRLISKD 108>XP_005275796 Length = 1733 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 EMGKVVEKD 9 E+G+++ KD Sbjct: 139 EVGRLISKD 147>NP_003950 Length = 1068 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 EMGKVVEKD 9 E+G VV+K+ Sbjct: 778 ELGAVVDKE 786>NP_005085 Length = 643 Score = 15.4 bits (28), Expect = 9605 Identities = 3/8 (37%), Positives = 8/8 (100%) Query: 2 MGKVVEKD 9 +G++++KD Sbjct: 448 VGRIIQKD 455>NP_950251 Length = 541 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 KVVEKD 9 KV+EKD Sbjct: 295 KVIEKD 300>NP_056315 Length = 696 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 KVVEKD 9 KV+EKD Sbjct: 450 KVIEKD 455>NP_005106 Length = 893 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 GKVVEKD 9 G+V+EKD Sbjct: 102 GEVLEKD 108>NP_059447 Length = 893 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 GKVVEKD 9 G+V+EKD Sbjct: 102 GEVLEKD 108>NP_001258635 Length = 233 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 MGKVVEKD 9 MGK+ EK+ Sbjct: 218 MGKIDEKE 225>NP_003793 Length = 1938 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 KVVEKD 9 KV+EKD Sbjct: 1579 KVIEKD 1584>XP_005261164 Length = 541 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 KVVEKD 9 KV+EKD Sbjct: 295 KVIEKD 300>XP_005261166 Length = 541 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 KVVEKD 9 KV+EKD Sbjct: 295 KVIEKD 300>XP_005261163 Length = 614 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 KVVEKD 9 KV+EKD Sbjct: 368 KVIEKD 373>XP_005251390 Length = 168 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 MGKVVEKD 9 MGK+ EK+ Sbjct: 153 MGKIDEKE 160>XP_005251389 Length = 239 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 MGKVVEKD 9 MGK+ EK+ Sbjct: 224 MGKIDEKE 231Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.301 0.128 0.322 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 545,375 Number of extensions: 1063 Number of successful extensions: 70 Number of sequences better than 10000.0: 70 Number of HSP's gapped: 70 Number of HSP's successfully gapped: 70 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.1 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |