Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_004110 19 665 NP_113655 17 3301 NP_001245357 17 3301 XP_006714863 17 3301 XP_005268578 17 3301 NP_775869 17 4312 XP_006719420 17 4312 NP_115763 16 5631 NP_001171600 16 5631 NP_036563 16 5631 NP_001245355 16 5631 XP_006722083 16 5631 XP_005257654 16 5631 XP_005257653 16 5631 XP_005257652 16 5631 XP_006717307 16 5631 XP_006717306 16 5631 XP_006717305 16 5631 XP_005266153 16 5631 XP_006717304 16 5631 XP_006714862 16 5631 NP_003077 16 5631 NP_000283 16 7355 NP_003593 16 7355 NP_001268233 16 7355 NP_001128683 16 7355 XP_006724561 16 7355 XP_005274607 16 7355 XP_005274605 16 7355 XP_006724560 16 7355 XP_006724559 16 7355 XP_006716216 16 7355 XP_005250700 16 7355 XP_006716215 16 7355 NP_001014301 16 7355 NP_694972 15 9605 NP_733749 15 9605 NP_056254 15 9605 NP_056013 15 9605 NP_001139679 15 9605 NP_001139678 15 9605 NP_001139677 15 9605 NP_001139676 15 9605 NP_001139675 15 9605 NP_001193762 15 9605 NP_874369 15 9605 NP_006379 15 9605 NP_874368 15 9605 NP_002579 15 9605 NP_115778 15 9605 XP_006718484 15 9605 XP_005271814 15 9605 XP_005271810 15 9605 XP_005271808 15 9605 XP_005271807 15 9605 NP_001139674 15 9605>NP_004110 Length = 993 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 EMDLGLLS 8 EMDLGLLS Sbjct: 978 EMDLGLLS 985>NP_113655 Length = 959 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 MDLGLLSA 9 MDLGL++A Sbjct: 570 MDLGLINA 577>NP_001245357 Length = 983 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 MDLGLLSA 9 MDLGL++A Sbjct: 594 MDLGLINA 601>XP_006714863 Length = 921 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 MDLGLLSA 9 MDLGL++A Sbjct: 532 MDLGLINA 539>XP_005268578 Length = 959 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 MDLGLLSA 9 MDLGL++A Sbjct: 570 MDLGLINA 577>NP_775869 Length = 921 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 EMDLGLLSA 9 EM+L LLSA Sbjct: 605 EMNLSLLSA 613>XP_006719420 Length = 949 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 EMDLGLLSA 9 EM+L LLSA Sbjct: 634 EMNLSLLSA 642>NP_115763 Length = 1243 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 MDLGLLSA 9 +DLGLLS+ Sbjct: 65 VDLGLLSS 72>NP_001171600 Length = 715 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 EMDLGLL 7 +MDLGLL Sbjct: 574 KMDLGLL 580>NP_036563 Length = 775 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 EMDLGLL 7 +MDLGLL Sbjct: 634 KMDLGLL 640>NP_001245355 Length = 945 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 EMDLGLLSA 9 ++DLGL++A Sbjct: 555 DIDLGLINA 563>XP_006722083 Length = 1233 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 MDLGLLSA 9 +DLGLLS+ Sbjct: 65 VDLGLLSS 72>XP_005257654 Length = 1237 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 MDLGLLSA 9 +DLGLLS+ Sbjct: 65 VDLGLLSS 72>XP_005257653 Length = 1242 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 MDLGLLSA 9 +DLGLLS+ Sbjct: 65 VDLGLLSS 72>XP_005257652 Length = 1279 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 MDLGLLSA 9 +DLGLLS+ Sbjct: 65 VDLGLLSS 72>XP_006717307 Length = 873 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 MDLGLLS 8 +DLGLLS Sbjct: 673 LDLGLLS 679>XP_006717306 Length = 1441 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 MDLGLLS 8 +DLGLLS Sbjct: 1241 LDLGLLS 1247>XP_006717305 Length = 1469 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 MDLGLLS 8 +DLGLLS Sbjct: 1269 LDLGLLS 1275>XP_005266153 Length = 1469 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 MDLGLLS 8 +DLGLLS Sbjct: 1269 LDLGLLS 1275>XP_006717304 Length = 1469 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 MDLGLLS 8 +DLGLLS Sbjct: 1269 LDLGLLS 1275>XP_006714862 Length = 956 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 EMDLGLLSA 9 ++DLGL++A Sbjct: 566 DIDLGLINA 574>NP_003077 Length = 1469 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 MDLGLLS 8 +DLGLLS Sbjct: 1269 LDLGLLS 1275>NP_000283 Length = 1235 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 EMDLGLLS 8 E+D GLLS Sbjct: 254 EIDAGLLS 261>NP_003593 Length = 327 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 MDLGLLS 8 M+LGLLS Sbjct: 95 MELGLLS 101>NP_001268233 Length = 297 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 MDLGLLS 8 M+LGLLS Sbjct: 65 MELGLLS 71>NP_001128683 Length = 322 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 MDLGLLS 8 M+LGLLS Sbjct: 90 MELGLLS 96>XP_006724561 Length = 1061 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 EMDLGLLS 8 E+D GLLS Sbjct: 72 EIDAGLLS 79>XP_005274607 Length = 1207 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 EMDLGLLS 8 E+D GLLS Sbjct: 254 EIDAGLLS 261>XP_005274605 Length = 1217 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 EMDLGLLS 8 E+D GLLS Sbjct: 254 EIDAGLLS 261>XP_006724560 Length = 1225 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 EMDLGLLS 8 E+D GLLS Sbjct: 254 EIDAGLLS 261>XP_006724559 Length = 1243 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 EMDLGLLS 8 E+D GLLS Sbjct: 254 EIDAGLLS 261>XP_006716216 Length = 282 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 MDLGLLS 8 M+LGLLS Sbjct: 90 MELGLLS 96>XP_005250700 Length = 287 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 MDLGLLS 8 M+LGLLS Sbjct: 95 MELGLLS 101>XP_006716215 Length = 322 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 MDLGLLS 8 M+LGLLS Sbjct: 95 MELGLLS 101>NP_001014301 Length = 193 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 DLGLLSA 9 DLGLLS+ Sbjct: 53 DLGLLSS 59>NP_694972 Length = 1330 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 DLGLLS 8 DLGLLS Sbjct: 955 DLGLLS 960>NP_733749 Length = 673 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 MDLGLLS 8 M+LGLLS Sbjct: 46 MNLGLLS 52>NP_056254 Length = 274 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 EMDLGLLS 8 EM+ GLLS Sbjct: 177 EMERGLLS 184>NP_056013 Length = 1261 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 DLGLLS 8 DLGLLS Sbjct: 1197 DLGLLS 1202>NP_001139679 Length = 576 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 MDLGLLS 8 M+LGLLS Sbjct: 46 MNLGLLS 52>NP_001139678 Length = 484 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 MDLGLLS 8 M+LGLLS Sbjct: 46 MNLGLLS 52>NP_001139677 Length = 639 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 MDLGLLS 8 M+LGLLS Sbjct: 46 MNLGLLS 52>NP_001139676 Length = 604 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 MDLGLLS 8 M+LGLLS Sbjct: 46 MNLGLLS 52>NP_001139675 Length = 581 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 MDLGLLS 8 M+LGLLS Sbjct: 46 MNLGLLS 52>NP_001193762 Length = 494 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 DLGLLS 8 DLGLLS Sbjct: 389 DLGLLS 394>NP_874369 Length = 546 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 DLGLLS 8 DLGLLS Sbjct: 441 DLGLLS 446>NP_006379 Length = 513 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 DLGLLS 8 DLGLLS Sbjct: 408 DLGLLS 413>NP_874368 Length = 461 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 DLGLLS 8 DLGLLS Sbjct: 356 DLGLLS 361>NP_002579 Length = 934 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 MDLGLLSA 9 +DLG LSA Sbjct: 56 LDLGSLSA 63>NP_115778 Length = 863 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 MDLGLLSA 9 +DLG LSA Sbjct: 56 LDLGSLSA 63>XP_006718484 Length = 522 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 DLGLLS 8 DLGLLS Sbjct: 417 DLGLLS 422>XP_005271814 Length = 1047 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 DLGLLS 8 DLGLLS Sbjct: 983 DLGLLS 988>XP_005271810 Length = 1276 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 DLGLLS 8 DLGLLS Sbjct: 1212 DLGLLS 1217>XP_005271808 Length = 1318 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 DLGLLS 8 DLGLLS Sbjct: 1254 DLGLLS 1259>XP_005271807 Length = 1333 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 DLGLLS 8 DLGLLS Sbjct: 1269 DLGLLS 1274>NP_001139674 Length = 659 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 MDLGLLS 8 M+LGLLS Sbjct: 46 MNLGLLS 52Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.315 0.136 0.344 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 466,350 Number of extensions: 626 Number of successful extensions: 56 Number of sequences better than 10000.0: 56 Number of HSP's gapped: 56 Number of HSP's successfully gapped: 56 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.6 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |