Cancertope

In silico Platform for designing genome-based
Personalized immunotherapy or Vaccine against Cancer

Blast-Search of mutated query peptide against human proteome

BLAST Search Results
BLASTP 2.2.15 [Oct-15-2006]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= User_input
         (9 letters)

Database: HUMAN_PROTEOME_FASTA 
           71,491 sequences; 45,948,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

NP_000236                                                              18    1482
NP_001120972                                                           18    1482
NP_005520                                                              18    1482
XP_006716054                                                           18    1482
XP_006716053                                                           18    1482
XP_006716052                                                           18    1482
XP_006716051                                                           18    1482
XP_006710661                                                           18    1482
XP_005245920                                                           18    1482
XP_006710660                                                           18    1482
XP_006710659                                                           18    1482
XP_006710658                                                           18    1482
XP_006710657                                                           18    1482
NP_001157790                                                           17    2528
NP_001157791                                                           17    2528
NP_001157789                                                           17    2528
NP_001448                                                              17    2528
NP_001157787                                                           17    2528
NP_079466                                                              17    2528
XP_003960344                                                           17    2528
XP_006713130                                                           17    2528
XP_005265039                                                           17    2528
XP_005265038                                                           17    2528
XP_005265035                                                           17    2528
XP_005265034                                                           17    2528
XP_006712951                                                           17    2528
XP_006712732                                                           17    2528
XP_006712731                                                           17    2528
XP_006712730                                                           17    2528
XP_006712729                                                           17    2528
XP_006712728                                                           17    2528
XP_006712727                                                           17    2528
XP_006712726                                                           17    2528
XP_006712725                                                           17    2528
XP_006712724                                                           17    2528
XP_005264052                                                           17    2528
XP_005263995                                                           17    2528
XP_006712580                                                           17    2528
XP_005263994                                                           17    2528
XP_006712579                                                           17    2528
XP_006712578                                                           17    2528
XP_006712577                                                           17    2528
XP_005276133                                                           17    2528
XP_006710197                                                           17    2528
NP_005560                                                              17    3301
NP_057952                                                              17    3301
NP_001026971                                                           17    3301
NP_062540                                                              17    3301
NP_001120717                                                           17    3301
NP_001120716                                                           17    3301
XP_005252152                                                           17    3301
XP_005252153                                                           17    3301
XP_006717249                                                           17    3301
NP_653172                                                              17    4312
NP_001273719                                                           17    4312
XP_005262934                                                           17    4312
NP_573441                                                              16    5631
XP_005259077                                                           16    5631
NP_005397                                                              16    7355
NP_001245344                                                           16    7355
NP_001186702                                                           16    7355
NP_001186703                                                           16    7355
NP_981953                                                              16    7355
NP_002781                                                              16    7355
NP_001186701                                                           16    7355
NP_001002020                                                           16    7355
NP_065860                                                              16    7355
NP_001245347                                                           16    7355
NP_001245346                                                           16    7355
NP_001245345                                                           16    7355
NP_001002019                                                           16    7355
XP_005271685                                                           16    7355
XP_006718956                                                           16    7355
NP_079491                                                              16    7355
NP_115646                                                              15    9605
NP_001002901                                                           15    9605
NP_001275544                                                           15    9605
NP_002996                                                              15    9605
NP_000202                                                              15    9605
NP_001120963                                                           15    9605
NP_006769                                                              15    9605
NP_075447                                                              15    9605
NP_001275545                                                           15    9605
XP_006720713                                                           15    9605
XP_006720712                                                           15    9605
XP_006720711                                                           15    9605
XP_005255029                                                           15    9605
XP_005255030                                                           15    9605
XP_006720710                                                           15    9605
XP_005255027                                                           15    9605
XP_005255028                                                           15    9605
XP_005255026                                                           15    9605
XP_005273605                                                           15    9605
XP_005273604                                                           15    9605
XP_005249966                                                           15    9605
XP_005245497                                                           15    9605
XP_005245496                                                           15    9605
XP_005245495                                                           15    9605
XP_005245493                                                           15    9605
XP_005245492                                                           15    9605
XP_006711023                                                           15    9605
NP_439893                                                              15    9605
>NP_000236
          Length = 1390

 Score = 18.1 bits (35), Expect =  1482
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1   ELVRCDARV 9
           ELVR DARV
Sbjct: 967 ELVRYDARV 975
>NP_001120972
          Length = 1408

 Score = 18.1 bits (35), Expect =  1482
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1   ELVRCDARV 9
           ELVR DARV
Sbjct: 985 ELVRYDARV 993
>NP_005520
          Length = 4391

 Score = 18.1 bits (35), Expect =  1482
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1   ELVRCDAR 8
           E+VRCD R
Sbjct: 875 EIVRCDER 882
>XP_006716054
          Length = 960

 Score = 18.1 bits (35), Expect =  1482
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1   ELVRCDARV 9
           ELVR DARV
Sbjct: 537 ELVRYDARV 545
>XP_006716053
          Length = 960

 Score = 18.1 bits (35), Expect =  1482
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1   ELVRCDARV 9
           ELVR DARV
Sbjct: 537 ELVRYDARV 545
>XP_006716052
          Length = 1409

 Score = 18.1 bits (35), Expect =  1482
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1   ELVRCDARV 9
           ELVR DARV
Sbjct: 986 ELVRYDARV 994
>XP_006716051
          Length = 1427

 Score = 18.1 bits (35), Expect =  1482
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1    ELVRCDARV 9
            ELVR DARV
Sbjct: 1004 ELVRYDARV 1012
>XP_006710661
          Length = 4057

 Score = 18.1 bits (35), Expect =  1482
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1   ELVRCDAR 8
           E+VRCD R
Sbjct: 893 EIVRCDER 900
>XP_005245920
          Length = 4392

 Score = 18.1 bits (35), Expect =  1482
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1   ELVRCDAR 8
           E+VRCD R
Sbjct: 876 EIVRCDER 883
>XP_006710660
          Length = 4397

 Score = 18.1 bits (35), Expect =  1482
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1   ELVRCDAR 8
           E+VRCD R
Sbjct: 875 EIVRCDER 882
>XP_006710659
          Length = 4556

 Score = 18.1 bits (35), Expect =  1482
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1   ELVRCDAR 8
           E+VRCD R
Sbjct: 893 EIVRCDER 900
>XP_006710658
          Length = 4563

 Score = 18.1 bits (35), Expect =  1482
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1   ELVRCDAR 8
           E+VRCD R
Sbjct: 876 EIVRCDER 883
>XP_006710657
          Length = 4579

 Score = 18.1 bits (35), Expect =  1482
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1   ELVRCDAR 8
           E+VRCD R
Sbjct: 892 EIVRCDER 899
>NP_001157790
          Length = 2591

 Score = 17.3 bits (33), Expect =  2528
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3   VRCDARV 9
           ++CDARV
Sbjct: 781 IKCDARV 787
>NP_001157791
          Length = 2578

 Score = 17.3 bits (33), Expect =  2528
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3   VRCDARV 9
           ++CDARV
Sbjct: 781 IKCDARV 787
>NP_001157789
          Length = 2633

 Score = 17.3 bits (33), Expect =  2528
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3   VRCDARV 9
           ++CDARV
Sbjct: 781 IKCDARV 787
>NP_001448
          Length = 2602

 Score = 17.3 bits (33), Expect =  2528
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3   VRCDARV 9
           ++CDARV
Sbjct: 781 IKCDARV 787
>NP_001157787
          Length = 1941

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4    RCDARV 9
            RCDARV
Sbjct: 1780 RCDARV 1785
>NP_079466
          Length = 1353

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4    RCDARV 9
            RCDARV
Sbjct: 1192 RCDARV 1197
>XP_003960344
          Length = 2085

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4    RCDARV 9
            RCDARV
Sbjct: 1924 RCDARV 1929
>XP_006713130
          Length = 2109

 Score = 17.3 bits (33), Expect =  2528
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3   VRCDARV 9
           ++CDARV
Sbjct: 781 IKCDARV 787
>XP_005265039
          Length = 2177

 Score = 17.3 bits (33), Expect =  2528
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3   VRCDARV 9
           ++CDARV
Sbjct: 781 IKCDARV 787
>XP_005265038
          Length = 2181

 Score = 17.3 bits (33), Expect =  2528
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3   VRCDARV 9
           ++CDARV
Sbjct: 781 IKCDARV 787
>XP_005265035
          Length = 2609

 Score = 17.3 bits (33), Expect =  2528
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3   VRCDARV 9
           ++CDARV
Sbjct: 781 IKCDARV 787
>XP_005265034
          Length = 2622

 Score = 17.3 bits (33), Expect =  2528
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3   VRCDARV 9
           ++CDARV
Sbjct: 781 IKCDARV 787
>XP_006712951
          Length = 2119

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4    RCDARV 9
            RCDARV
Sbjct: 1958 RCDARV 1963
>XP_006712732
          Length = 938

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4   RCDARV 9
           RCDARV
Sbjct: 777 RCDARV 782
>XP_006712731
          Length = 1102

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4   RCDARV 9
           RCDARV
Sbjct: 941 RCDARV 946
>XP_006712730
          Length = 1106

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4   RCDARV 9
           RCDARV
Sbjct: 945 RCDARV 950
>XP_006712729
          Length = 1121

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4   RCDARV 9
           RCDARV
Sbjct: 960 RCDARV 965
>XP_006712728
          Length = 1307

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4    RCDARV 9
            RCDARV
Sbjct: 1146 RCDARV 1151
>XP_006712727
          Length = 1319

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4    RCDARV 9
            RCDARV
Sbjct: 1158 RCDARV 1163
>XP_006712726
          Length = 1319

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4    RCDARV 9
            RCDARV
Sbjct: 1158 RCDARV 1163
>XP_006712725
          Length = 1352

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4    RCDARV 9
            RCDARV
Sbjct: 1191 RCDARV 1196
>XP_006712724
          Length = 1353

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4    RCDARV 9
            RCDARV
Sbjct: 1192 RCDARV 1197
>XP_005264052
          Length = 1353

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4    RCDARV 9
            RCDARV
Sbjct: 1192 RCDARV 1197
>XP_005263995
          Length = 1382

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4    RCDARV 9
            RCDARV
Sbjct: 1221 RCDARV 1226
>XP_006712580
          Length = 1382

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4    RCDARV 9
            RCDARV
Sbjct: 1221 RCDARV 1226
>XP_005263994
          Length = 1496

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4    RCDARV 9
            RCDARV
Sbjct: 1335 RCDARV 1340
>XP_006712579
          Length = 1865

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4    RCDARV 9
            RCDARV
Sbjct: 1753 RCDARV 1758
>XP_006712578
          Length = 1914

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4    RCDARV 9
            RCDARV
Sbjct: 1753 RCDARV 1758
>XP_006712577
          Length = 1915

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4    RCDARV 9
            RCDARV
Sbjct: 1754 RCDARV 1759
>XP_005276133
          Length = 334

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4   RCDARV 9
           RCDARV
Sbjct: 269 RCDARV 274
>XP_006710197
          Length = 1836

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4    RCDARV 9
            RCDARV
Sbjct: 1675 RCDARV 1680
>NP_005560
          Length = 638

 Score = 16.9 bits (32), Expect =  3301
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 1   ELVRCD 6
           EL+RCD
Sbjct: 361 ELIRCD 366
>NP_057952
          Length = 617

 Score = 16.9 bits (32), Expect =  3301
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 1   ELVRCD 6
           EL+RCD
Sbjct: 340 ELIRCD 345
>NP_001026971
          Length = 686

 Score = 16.9 bits (32), Expect =  3301
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 1   ELVRCD 6
           EL+RCD
Sbjct: 340 ELIRCD 345
>NP_062540
          Length = 810

 Score = 16.9 bits (32), Expect =  3301
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 1   ELVRCD 6
           EL+RCD
Sbjct: 597 ELIRCD 602
>NP_001120717
          Length = 810

 Score = 16.9 bits (32), Expect =  3301
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 1   ELVRCD 6
           EL+RCD
Sbjct: 597 ELIRCD 602
>NP_001120716
          Length = 810

 Score = 16.9 bits (32), Expect =  3301
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 1   ELVRCD 6
           EL+RCD
Sbjct: 597 ELIRCD 602
>XP_005252152
          Length = 810

 Score = 16.9 bits (32), Expect =  3301
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 1   ELVRCD 6
           EL+RCD
Sbjct: 597 ELIRCD 602
>XP_005252153
          Length = 810

 Score = 16.9 bits (32), Expect =  3301
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 1   ELVRCD 6
           EL+RCD
Sbjct: 597 ELIRCD 602
>XP_006717249
          Length = 810

 Score = 16.9 bits (32), Expect =  3301
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 1   ELVRCD 6
           EL+RCD
Sbjct: 597 ELIRCD 602
>NP_653172
          Length = 555

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   ELVRCDARV 9
           E+V CDA +
Sbjct: 227 EIVNCDADI 235
>NP_001273719
          Length = 555

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   ELVRCDARV 9
           E+V CDA +
Sbjct: 227 EIVNCDADI 235
>XP_005262934
          Length = 550

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   ELVRCDARV 9
           E+V CDA +
Sbjct: 222 EIVNCDADI 230
>NP_573441
          Length = 723

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2   LVRCDA 7
           +VRCDA
Sbjct: 104 IVRCDA 109
>XP_005259077
          Length = 755

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2   LVRCDA 7
           +VRCDA
Sbjct: 104 IVRCDA 109
>NP_005397
          Length = 1354

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 2   LVRCDARV 9
           +VRCD  V
Sbjct: 228 MVRCDTAV 235
>NP_001245344
          Length = 1168

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 5/6 (83%)

Query: 3   VRCDAR 8
           VRCD R
Sbjct: 541 VRCDTR 546
>NP_001186702
          Length = 183

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3   VRCDAR 8
           V+CDAR
Sbjct: 105 VQCDAR 110
>NP_001186703
          Length = 183

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3   VRCDAR 8
           V+CDAR
Sbjct: 105 VQCDAR 110
>NP_981953
          Length = 791

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 4   RCDARV 9
           RC+ARV
Sbjct: 444 RCEARV 449
>NP_002781
          Length = 241

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3   VRCDAR 8
           V+CDAR
Sbjct: 163 VQCDAR 168
>NP_001186701
          Length = 183

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3   VRCDAR 8
           V+CDAR
Sbjct: 105 VQCDAR 110
>NP_001002020
          Length = 399

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/5 (100%), Positives = 5/5 (100%)

Query: 4   RCDAR 8
           RCDAR
Sbjct: 167 RCDAR 171
>NP_065860
          Length = 1191

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 5/6 (83%)

Query: 3   VRCDAR 8
           VRCD R
Sbjct: 564 VRCDTR 569
>NP_001245347
          Length = 1155

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 5/6 (83%)

Query: 3   VRCDAR 8
           VRCD R
Sbjct: 528 VRCDTR 533
>NP_001245346
          Length = 1155

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 5/6 (83%)

Query: 3   VRCDAR 8
           VRCD R
Sbjct: 528 VRCDTR 533
>NP_001245345
          Length = 1165

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 5/6 (83%)

Query: 3   VRCDAR 8
           VRCD R
Sbjct: 538 VRCDTR 543
>NP_001002019
          Length = 399

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/5 (100%), Positives = 5/5 (100%)

Query: 4   RCDAR 8
           RCDAR
Sbjct: 167 RCDAR 171
>XP_005271685
          Length = 734

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 5/6 (83%)

Query: 3   VRCDAR 8
           VRCD R
Sbjct: 107 VRCDTR 112
>XP_006718956
          Length = 1191

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 5/6 (83%)

Query: 3   VRCDAR 8
           VRCD R
Sbjct: 564 VRCDTR 569
>NP_079491
          Length = 427

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/5 (100%), Positives = 5/5 (100%)

Query: 4   RCDAR 8
           RCDAR
Sbjct: 195 RCDAR 199
>NP_115646
          Length = 803

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 5/6 (83%)

Query: 1   ELVRCD 6
           ELV CD
Sbjct: 595 ELVHCD 600
>NP_001002901
          Length = 426

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/8 (50%), Positives = 7/8 (87%)

Query: 2   LVRCDARV 9
           ++RCD R+
Sbjct: 216 VLRCDTRL 223
>NP_001275544
          Length = 447

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 1  ELVRCDA 7
          ELVRC A
Sbjct: 67 ELVRCVA 73
>NP_002996
          Length = 830

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/6 (66%), Positives = 6/6 (100%)

Query: 1   ELVRCD 6
           ++VRCD
Sbjct: 426 DIVRCD 431
>NP_000202
          Length = 769

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/6 (66%), Positives = 5/6 (83%)

Query: 3  VRCDAR 8
          +RCD R
Sbjct: 60 IRCDTR 65
>NP_001120963
          Length = 769

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/6 (66%), Positives = 5/6 (83%)

Query: 3  VRCDAR 8
          +RCD R
Sbjct: 60 IRCDTR 65
>NP_006769
          Length = 481

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/7 (57%), Positives = 6/7 (85%)

Query: 2   LVRCDAR 8
           L+RC+ R
Sbjct: 258 LIRCETR 264
>NP_075447
          Length = 1437

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 1    ELVRCDAR 8
            ELV CD +
Sbjct: 1332 ELVMCDKK 1339
>NP_001275545
          Length = 447

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 1  ELVRCDA 7
          ELVRC A
Sbjct: 67 ELVRCVA 73
>XP_006720713
          Length = 462

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 1  ELVRCDA 7
          ELVRC A
Sbjct: 82 ELVRCVA 88
>XP_006720712
          Length = 527

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 1  ELVRCDA 7
          ELVRC A
Sbjct: 67 ELVRCVA 73
>XP_006720711
          Length = 527

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 1  ELVRCDA 7
          ELVRC A
Sbjct: 67 ELVRCVA 73
>XP_005255029
          Length = 527

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 1  ELVRCDA 7
          ELVRC A
Sbjct: 67 ELVRCVA 73
>XP_005255030
          Length = 527

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 1  ELVRCDA 7
          ELVRC A
Sbjct: 67 ELVRCVA 73
>XP_006720710
          Length = 527

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 1  ELVRCDA 7
          ELVRC A
Sbjct: 67 ELVRCVA 73
>XP_005255027
          Length = 527

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 1  ELVRCDA 7
          ELVRC A
Sbjct: 67 ELVRCVA 73
>XP_005255028
          Length = 527

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 1  ELVRCDA 7
          ELVRC A
Sbjct: 67 ELVRCVA 73
>XP_005255026
          Length = 527

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 1  ELVRCDA 7
          ELVRC A
Sbjct: 67 ELVRCVA 73
>XP_005273605
          Length = 1388

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 1    ELVRCDAR 8
            ELV CD +
Sbjct: 1283 ELVMCDKK 1290
>XP_005273604
          Length = 1426

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 1    ELVRCDAR 8
            ELV CD +
Sbjct: 1321 ELVMCDKK 1328
>XP_005249966
          Length = 948

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/5 (100%), Positives = 5/5 (100%)

Query: 2   LVRCD 6
           LVRCD
Sbjct: 883 LVRCD 887
>XP_005245497
          Length = 768

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/6 (66%), Positives = 6/6 (100%)

Query: 1   ELVRCD 6
           ++VRCD
Sbjct: 364 DIVRCD 369
>XP_005245496
          Length = 790

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/6 (66%), Positives = 6/6 (100%)

Query: 1   ELVRCD 6
           ++VRCD
Sbjct: 426 DIVRCD 431
>XP_005245495
          Length = 790

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/6 (66%), Positives = 6/6 (100%)

Query: 1   ELVRCD 6
           ++VRCD
Sbjct: 426 DIVRCD 431
>XP_005245493
          Length = 830

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/6 (66%), Positives = 6/6 (100%)

Query: 1   ELVRCD 6
           ++VRCD
Sbjct: 426 DIVRCD 431
>XP_005245492
          Length = 830

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/6 (66%), Positives = 6/6 (100%)

Query: 1   ELVRCD 6
           ++VRCD
Sbjct: 426 DIVRCD 431
>XP_006711023
          Length = 808

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 5/6 (83%)

Query: 1   ELVRCD 6
           ELV CD
Sbjct: 600 ELVHCD 605
>NP_439893
          Length = 395

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/7 (57%), Positives = 6/7 (85%)

Query: 2   LVRCDAR 8
           L+RC+ R
Sbjct: 258 LIRCETR 264
  Database: HUMAN_PROTEOME_FASTA
    Posted date:  May 26, 2014 10:46 AM
  Number of letters in database: 45,948,801
  Number of sequences in database:  71,491
  
Lambda     K      H
   0.335    0.143    0.446 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 71491
Number of Hits to DB: 513,589
Number of extensions: 585
Number of successful extensions: 102
Number of sequences better than 10000.0: 102
Number of HSP's gapped: 102
Number of HSP's successfully gapped: 102
Length of query: 9
Length of database: 45,948,801
Length adjustment: 0
Effective length of query: 9
Effective length of database: 45,948,801
Effective search space: 413539209
Effective search space used: 413539209
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 28 (16.4 bits)
S2: 28 (15.4 bits)

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