Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005742 18 1482 NP_671714 18 1482 XP_006715890 18 1482 XP_005250160 18 1482 XP_005250159 18 1482 NP_001124456 16 7355 NP_001124448 16 7355 NP_003485 16 7355 NP_001123927 16 7355 NP_001124454 16 7355 NP_001124452 16 7355 NP_001124459 16 7355 NP_001124455 16 7355 NP_001124457 16 7355 NP_001124450 16 7355 NP_001124451 16 7355 NP_001124449 16 7355 NP_001124458 16 7355 NP_001124453 16 7355 NP_001036064 16 7355 NP_005226 16 7355 NP_001258635 16 7355 NP_005014 16 7355 NP_055796 16 7355 XP_005251390 16 7355 XP_005251389 16 7355 XP_005272080 16 7355 XP_005272077 16 7355 XP_005246434 16 7355 XP_005246433 16 7355 XP_005246432 16 7355 XP_006712427 16 7355 XP_005264642 16 7355 XP_005264641 16 7355 NP_006588 15 9605 NP_694881 15 9605 NP_001077083 15 9605 NP_938408 15 9605 NP_057050 15 9605 XP_006726645 15 9605 XP_006723868 15 9605 XP_006723867 15 9605 XP_005259360 15 9605 XP_006721083 15 9605 XP_006718894 15 9605 XP_005263742 15 9605 XP_005263740 15 9605 XP_005263739 15 9605 XP_005263738 15 9605 NP_001123483 15 9605 NP_113639 15 9605>NP_005742 Length = 3907 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ELMGKLEVT 9 ELM KLEVT Sbjct: 940 ELMEKLEVT 948>NP_671714 Length = 3899 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ELMGKLEVT 9 ELM KLEVT Sbjct: 940 ELMEKLEVT 948>XP_006715890 Length = 3860 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ELMGKLEVT 9 ELM KLEVT Sbjct: 940 ELMEKLEVT 948>XP_005250160 Length = 3939 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ELMGKLEVT 9 ELM KLEVT Sbjct: 940 ELMEKLEVT 948>XP_005250159 Length = 3952 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ELMGKLEVT 9 ELM KLEVT Sbjct: 940 ELMEKLEVT 948>NP_001124456 Length = 2088 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LMGKLEVT 9 L GKLE+T Sbjct: 1989 LAGKLEMT 1996>NP_001124448 Length = 2066 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LMGKLEVT 9 L GKLE+T Sbjct: 1967 LAGKLEMT 1974>NP_003485 Length = 2080 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LMGKLEVT 9 L GKLE+T Sbjct: 1981 LAGKLEMT 1988>NP_001123927 Length = 2081 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LMGKLEVT 9 L GKLE+T Sbjct: 1982 LAGKLEMT 1989>NP_001124454 Length = 2112 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LMGKLEVT 9 L GKLE+T Sbjct: 2013 LAGKLEMT 2020>NP_001124452 Length = 2097 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LMGKLEVT 9 L GKLE+T Sbjct: 1998 LAGKLEMT 2005>NP_001124459 Length = 2119 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LMGKLEVT 9 L GKLE+T Sbjct: 2020 LAGKLEMT 2027>NP_001124455 Length = 2102 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LMGKLEVT 9 L GKLE+T Sbjct: 2003 LAGKLEMT 2010>NP_001124457 Length = 2098 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LMGKLEVT 9 L GKLE+T Sbjct: 1999 LAGKLEMT 2006>NP_001124450 Length = 2101 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LMGKLEVT 9 L GKLE+T Sbjct: 2002 LAGKLEMT 2009>NP_001124451 Length = 2111 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LMGKLEVT 9 L GKLE+T Sbjct: 2012 LAGKLEMT 2019>NP_001124449 Length = 2087 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LMGKLEVT 9 L GKLE+T Sbjct: 1988 LAGKLEMT 1995>NP_001124458 Length = 2067 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LMGKLEVT 9 L GKLE+T Sbjct: 1968 LAGKLEMT 1975>NP_001124453 Length = 2118 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LMGKLEVT 9 L GKLE+T Sbjct: 2019 LAGKLEMT 2026>NP_001036064 Length = 1292 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LMGKLEVT 9 +MG LE+T Sbjct: 59 VMGNLEIT 66>NP_005226 Length = 1308 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LMGKLEVT 9 +MG LE+T Sbjct: 59 VMGNLEIT 66>NP_001258635 Length = 233 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 ELMGKLE 7 ELMGK++ Sbjct: 216 ELMGKID 222>NP_005014 Length = 377 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 LMGKLE 7 LMGKLE Sbjct: 232 LMGKLE 237>NP_055796 Length = 1946 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 ELMGKLEV 8 EL+G LE+ Sbjct: 756 ELLGSLEI 763>XP_005251390 Length = 168 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 ELMGKLE 7 ELMGK++ Sbjct: 151 ELMGKID 157>XP_005251389 Length = 239 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 ELMGKLE 7 ELMGK++ Sbjct: 222 ELMGKID 228>XP_005272080 Length = 258 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 LMGKLE 7 LMGKLE Sbjct: 109 LMGKLE 114>XP_005272077 Length = 428 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 LMGKLE 7 LMGKLE Sbjct: 279 LMGKLE 284>XP_005246434 Length = 1282 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LMGKLEVT 9 +MG LE+T Sbjct: 59 VMGNLEIT 66>XP_005246433 Length = 1298 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LMGKLEVT 9 +MG LE+T Sbjct: 59 VMGNLEIT 66>XP_005246432 Length = 1307 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LMGKLEVT 9 +MG LE+T Sbjct: 59 VMGNLEIT 66>XP_006712427 Length = 1323 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LMGKLEVT 9 +MG LE+T Sbjct: 59 VMGNLEIT 66>XP_005264642 Length = 2132 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LMGKLEVT 9 L GKLE+T Sbjct: 2033 LAGKLEMT 2040>XP_005264641 Length = 2133 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LMGKLEVT 9 L GKLE+T Sbjct: 2034 LAGKLEMT 2041>NP_006588 Length = 646 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LMGKLEVT 9 L+GK E+T Sbjct: 455 LLGKFELT 462>NP_694881 Length = 493 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LMGKLEVT 9 L+GK E+T Sbjct: 455 LLGKFELT 462>NP_001077083 Length = 523 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 ELMGKLEV 8 +L+GKL+V Sbjct: 371 QLVGKLQV 378>NP_938408 Length = 388 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 MGKLEVT 9 +GK+EVT Sbjct: 124 LGKVEVT 130>NP_057050 Length = 383 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 MGKLEVT 9 +GK+EVT Sbjct: 124 LGKVEVT 130>XP_006726645 Length = 130 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ELMGKLEVT 9 E+M KLEV+ Sbjct: 104 EVMEKLEVS 112>XP_006723868 Length = 282 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 MGKLEVT 9 +GK+EVT Sbjct: 124 LGKVEVT 130>XP_006723867 Length = 389 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 MGKLEVT 9 +GK+EVT Sbjct: 124 LGKVEVT 130>XP_005259360 Length = 281 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 GKLEVT 9 GKLE+T Sbjct: 199 GKLEIT 204>XP_006721083 Length = 534 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 ELMGKLEV 8 +L+GKL+V Sbjct: 371 QLVGKLQV 378>XP_006718894 Length = 646 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LMGKLEVT 9 L+GK E+T Sbjct: 455 LLGKFELT 462>XP_005263742 Length = 1043 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ELMGKLEVT 9 +LMG LEV+ Sbjct: 539 DLMGCLEVS 547>XP_005263740 Length = 1441 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ELMGKLEVT 9 +LMG LEV+ Sbjct: 539 DLMGCLEVS 547>XP_005263739 Length = 1839 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ELMGKLEVT 9 +LMG LEV+ Sbjct: 539 DLMGCLEVS 547>XP_005263738 Length = 1876 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ELMGKLEVT 9 +LMG LEV+ Sbjct: 539 DLMGCLEVS 547>NP_001123483 Length = 249 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 GKLEVT 9 GKLE+T Sbjct: 167 GKLEIT 172>NP_113639 Length = 267 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 GKLEVT 9 GKLE+T Sbjct: 185 GKLEIT 190Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.310 0.133 0.328 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 456,566 Number of extensions: 945 Number of successful extensions: 51 Number of sequences better than 10000.0: 51 Number of HSP's gapped: 51 Number of HSP's successfully gapped: 51 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.4 bits) S2: 28 (15.4 bits)
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |