Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_055726 20 390 NP_003109 17 3301 NP_001073890 17 4312 XP_006722755 17 4312 XP_005249641 17 4312 NP_066939 17 4312 NP_001018125 16 5631 NP_149075 16 5631 NP_001138508 16 5631 NP_031383 16 5631 NP_001194005 16 5631 NP_543024 16 5631 XP_005276286 16 5631 XP_005277590 16 5631 XP_006723777 16 5631 XP_005260352 16 5631 XP_005265698 16 5631 XP_005265004 16 5631 XP_006713088 16 5631 XP_006713087 16 5631 XP_005265003 16 5631 XP_006713086 16 5631 XP_006713085 16 5631 XP_006713084 16 5631 XP_005276004 16 5631 NP_056517 16 7355 NP_001093391 16 7355 NP_002198 16 7355 NP_004690 16 7355 NP_001077005 16 7355 NP_006368 16 7355 NP_149077 16 7355 NP_060487 16 7355 NP_001273922 16 7355 XP_005254186 16 7355 XP_005269994 16 7355 XP_006716779 16 7355 NP_006456 16 7355 NP_077003 15 9605 NP_001229338 15 9605 NP_073744 15 9605 NP_001030611 15 9605 NP_056503 15 9605 NP_071375 15 9605 NP_073588 15 9605 XP_005255527 15 9605 XP_005255528 15 9605 XP_005252192 15 9605 XP_005262955 15 9605>NP_055726 Length = 961 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 ELLSKDFAK 9 ELL+KDFAK Sbjct: 710 ELLNKDFAK 718>NP_003109 Length = 303 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ELLSKDFAK 9 ELL++DF K Sbjct: 214 ELLARDFEK 222>NP_001073890 Length = 1703 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 ELLSKDFA 8 +++SKDFA Sbjct: 1234 DIISKDFA 1241>XP_006722755 Length = 1722 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 ELLSKDFA 8 +++SKDFA Sbjct: 1234 DIISKDFA 1241>XP_005249641 Length = 979 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ELLSKDFAK 9 EL+ KDF K Sbjct: 906 ELMEKDFYK 914>NP_066939 Length = 1119 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ELLSKDFAK 9 EL+ KDF K Sbjct: 906 ELMEKDFYK 914>NP_001018125 Length = 1451 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LLSKDFAK 9 L S+DFAK Sbjct: 703 LFSQDFAK 710>NP_149075 Length = 1471 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LLSKDFAK 9 L S+DFAK Sbjct: 703 LFSQDFAK 710>NP_001138508 Length = 737 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 ELLSKDFA 8 EL++KD+A Sbjct: 62 ELINKDYA 69>NP_031383 Length = 738 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 ELLSKDFA 8 EL++KD+A Sbjct: 62 ELINKDYA 69>NP_001194005 Length = 423 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ELLSKDFAK 9 +L+SKDF + Sbjct: 268 QLISKDFGE 276>NP_543024 Length = 572 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ELLSKDFAK 9 +L+SKDF + Sbjct: 268 QLISKDFGE 276>XP_005276286 Length = 642 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LLSKDFAK 9 L S+DFAK Sbjct: 250 LFSQDFAK 257>XP_005277590 Length = 900 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LLSKDFAK 9 L S+DFAK Sbjct: 450 LFSQDFAK 457>XP_006723777 Length = 469 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ELLSKDFAK 9 +L+SKDF + Sbjct: 161 QLISKDFGE 169>XP_005260352 Length = 576 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ELLSKDFAK 9 +L+SKDF + Sbjct: 268 QLISKDFGE 276>XP_005265698 Length = 577 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LLSKDFAK 9 L S+DFAK Sbjct: 234 LFSQDFAK 241>XP_005265004 Length = 806 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LLSKDFAK 9 L S+DFAK Sbjct: 38 LFSQDFAK 45>XP_006713088 Length = 1382 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LLSKDFAK 9 L S+DFAK Sbjct: 614 LFSQDFAK 621>XP_006713087 Length = 1432 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LLSKDFAK 9 L S+DFAK Sbjct: 703 LFSQDFAK 710>XP_005265003 Length = 1451 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LLSKDFAK 9 L S+DFAK Sbjct: 703 LFSQDFAK 710>XP_006713086 Length = 1458 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LLSKDFAK 9 L S+DFAK Sbjct: 703 LFSQDFAK 710>XP_006713085 Length = 1471 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LLSKDFAK 9 L S+DFAK Sbjct: 703 LFSQDFAK 710>XP_006713084 Length = 1471 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LLSKDFAK 9 L S+DFAK Sbjct: 703 LFSQDFAK 710>XP_005276004 Length = 584 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LLSKDFAK 9 L S+DFAK Sbjct: 241 LFSQDFAK 248>NP_056517 Length = 296 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 ELLSKDF 7 ELL KDF Sbjct: 155 ELLRKDF 161>NP_001093391 Length = 324 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LLSKDFAK 9 L++KDF K Sbjct: 249 LITKDFVK 256>NP_002198 Length = 1035 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 ELLSKDFAK 9 ELL DF K Sbjct: 697 ELLESDFLK 705>NP_004690 Length = 339 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ELLSKDFAK 9 E+L KDF++ Sbjct: 232 EILRKDFSE 240>NP_001077005 Length = 725 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ELLSKDFAK 9 ELL KD+ K Sbjct: 304 ELLLKDYLK 312>NP_006368 Length = 1591 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 ELLSKDF 7 ++LSKDF Sbjct: 1154 DILSKDF 1160>NP_149077 Length = 725 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ELLSKDFAK 9 ELL KD+ K Sbjct: 304 ELLLKDYLK 312>NP_060487 Length = 898 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ELLSKDFAK 9 ELLS +FA+ Sbjct: 169 ELLSTEFAE 177>NP_001273922 Length = 724 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 ELLSKDFAK 9 ELL KD+ K Sbjct: 304 ELLLKDYLK 312>XP_005254186 Length = 561 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LSKDFAK 9 +S+DFAK Sbjct: 202 ISRDFAK 208>XP_005269994 Length = 898 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ELLSKDFAK 9 ELLS +FA+ Sbjct: 169 ELLSTEFAE 177>XP_006716779 Length = 2399 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 ELLSKDF 7 ++LSKDF Sbjct: 1962 DILSKDF 1968>NP_006456 Length = 560 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LSKDFAK 9 +S+DFAK Sbjct: 202 ISRDFAK 208>NP_077003 Length = 360 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LSKDFAK 9 L+KDFA+ Sbjct: 279 LAKDFAR 285>NP_001229338 Length = 876 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 ELLSKDF 7 E+LS+DF Sbjct: 849 EILSEDF 855>NP_073744 Length = 746 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ELLSKDFAK 9 EL+ +DFA+ Sbjct: 521 ELIFEDFAR 529>NP_001030611 Length = 733 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ELLSKDFAK 9 EL+ +DFA+ Sbjct: 508 ELIFEDFAR 516>NP_056503 Length = 1060 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LSKDFAK 9 LSKD+A+ Sbjct: 210 LSKDYAR 216>NP_071375 Length = 975 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 ELLSKDF 7 ELLS DF Sbjct: 293 ELLSDDF 299>NP_073588 Length = 875 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 ELLSKDF 7 E+LS+DF Sbjct: 848 EILSEDF 854>XP_005255527 Length = 859 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 ELLSKDF 7 ELLS DF Sbjct: 177 ELLSDDF 183>XP_005255528 Length = 1003 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 ELLSKDF 7 ELLS DF Sbjct: 321 ELLSDDF 327>XP_005252192 Length = 735 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ELLSKDFAK 9 EL+ +DFA+ Sbjct: 510 ELIFEDFAR 518>XP_005262955 Length = 336 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ELLSKDFAK 9 +LLSK FA+ Sbjct: 328 KLLSKKFAQ 336Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.314 0.132 0.329 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 544,099 Number of extensions: 856 Number of successful extensions: 49 Number of sequences better than 10000.0: 49 Number of HSP's gapped: 49 Number of HSP's successfully gapped: 49 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.6 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |