Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001261 20 299 XP_005271924 20 299 XP_005271923 20 299 NP_001262 18 1935 NP_115604 17 2528 NP_861454 17 4312 NP_001364 17 4312 NP_001035289 17 4312 NP_001035273 17 4312 NP_001035272 17 4312 NP_001035271 17 4312 NP_063948 17 4312 XP_006720546 17 4312 XP_006720545 17 4312 XP_006711798 17 4312 NP_817124 16 5631 NP_056011 16 5631 NP_001124479 16 5631 NP_002747 16 5631 NP_659731 16 5631 XP_005256780 16 5631 XP_005256779 16 5631 XP_005256778 16 5631 XP_005262927 16 5631 XP_005262926 16 5631 XP_003846795 16 5631 XP_006710290 16 5631 NP_002162 16 7355 NP_002161 16 7355 NP_004762 16 7355 NP_067091 16 7355 NP_003079 16 7355 NP_683704 16 7355 NP_078862 16 7355 NP_683706 16 7355 NP_683707 16 7355 NP_002166 16 7355 NP_001136438 16 7355 NP_002160 16 7355 XP_006722610 16 7355 XP_006710382 16 7355 XP_006710381 16 7355 NP_002163 16 7355 NP_066546 16 7355 NP_066401 16 7355 NP_002164 16 7355 NP_009007 16 7355 NP_478055 15 9605 NP_478054 15 9605 NP_001840 15 9605 NP_852664 15 9605 NP_852556 15 9605 NP_653271 15 9605 NP_852665 15 9605 NP_001229395 15 9605 NP_001269353 15 9605 NP_476517 15 9605 XP_005255185 15 9605 XP_005248599 15 9605 NP_066282 15 9605 NP_653275 15 9605>NP_001261 Length = 1710 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 ELDQKTFNI 9 ELDQKTF+I Sbjct: 1408 ELDQKTFSI 1416>XP_005271924 Length = 1710 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 ELDQKTFNI 9 ELDQKTF+I Sbjct: 1408 ELDQKTFSI 1416>XP_005271923 Length = 1798 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 ELDQKTFNI 9 ELDQKTF+I Sbjct: 1496 ELDQKTFSI 1504>NP_001262 Length = 1828 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 ELDQKTFNI 9 +LDQ+TF+I Sbjct: 1463 DLDQETFSI 1471>NP_115604 Length = 515 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 DQKTFNI 9 D+KTFNI Sbjct: 417 DKKTFNI 423>NP_861454 Length = 551 Score = 16.5 bits (31), Expect = 4312 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 ELDQKTFNI 9 +LD++TF++ Sbjct: 451 QLDERTFSV 459>NP_001364 Length = 4515 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ELDQKTFNI 9 EL++KT N+ Sbjct: 3453 ELEEKTLNL 3461>NP_001035289 Length = 253 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 ELDQKTFN 8 E D+KT+N Sbjct: 58 EADEKTYN 65>NP_001035273 Length = 253 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 ELDQKTFN 8 E D+KT+N Sbjct: 58 EADEKTYN 65>NP_001035272 Length = 276 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 ELDQKTFN 8 E D+KT+N Sbjct: 81 EADEKTYN 88>NP_001035271 Length = 253 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 ELDQKTFN 8 E D+KT+N Sbjct: 58 EADEKTYN 65>NP_063948 Length = 253 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 ELDQKTFN 8 E D+KT+N Sbjct: 58 EADEKTYN 65>XP_006720546 Length = 427 Score = 16.5 bits (31), Expect = 4312 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 ELDQKTFNI 9 +LD++TF++ Sbjct: 327 QLDERTFSV 335>XP_006720545 Length = 427 Score = 16.5 bits (31), Expect = 4312 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 ELDQKTFNI 9 +LD++TF++ Sbjct: 327 QLDERTFSV 335>XP_006711798 Length = 4586 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ELDQKTFNI 9 EL++KT N+ Sbjct: 3515 ELEEKTLNL 3523>NP_817124 Length = 444 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ELDQKTFNI 9 E+D++ FNI Sbjct: 325 EVDEQMFNI 333>NP_056011 Length = 1609 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LDQKTFNI 9 LDQ T+N+ Sbjct: 527 LDQSTWNV 534>NP_001124479 Length = 1610 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LDQKTFNI 9 LDQ T+N+ Sbjct: 528 LDQSTWNV 535>NP_002747 Length = 318 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ELDQKTFNI 9 EL+QK +N+ Sbjct: 210 ELNQKGYNV 218>NP_659731 Length = 347 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ELDQKTFNI 9 EL+QK +N+ Sbjct: 239 ELNQKGYNV 247>XP_005256780 Length = 318 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ELDQKTFNI 9 EL+QK +N+ Sbjct: 210 ELNQKGYNV 218>XP_005256779 Length = 318 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ELDQKTFNI 9 EL+QK +N+ Sbjct: 210 ELNQKGYNV 218>XP_005256778 Length = 343 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ELDQKTFNI 9 EL+QK +N+ Sbjct: 235 ELNQKGYNV 243>XP_005262927 Length = 1526 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LDQKTFNI 9 LDQ T+N+ Sbjct: 528 LDQSTWNV 535>XP_005262926 Length = 1609 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LDQKTFNI 9 LDQ T+N+ Sbjct: 528 LDQSTWNV 535>XP_003846795 Length = 142 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ELDQKTFNI 9 EL+QK +N+ Sbjct: 34 ELNQKGYNV 42>XP_006710290 Length = 574 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ELDQKTFNI 9 EL+QK +N+ Sbjct: 523 ELNQKGYNV 531>NP_002162 Length = 189 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ELDQKTFNI 9 E+ Q+TFN+ Sbjct: 82 EMIQQTFNL 90>NP_002161 Length = 189 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ELDQKTFNI 9 E+ Q+TFN+ Sbjct: 82 EMIQQTFNL 90>NP_004762 Length = 483 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 ELDQKTFNI 9 +LDQ T N+ Sbjct: 86 KLDQTTMNV 94>NP_067091 Length = 189 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ELDQKTFNI 9 E+ Q+TFN+ Sbjct: 82 EMIQQTFNL 90>NP_003079 Length = 493 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 ELDQKTFNI 9 E DQ+TF + Sbjct: 288 ETDQETFQL 296>NP_683704 Length = 719 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LDQKTFN 8 +DQKTF+ Sbjct: 55 VDQKTFH 61>NP_078862 Length = 736 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LDQKTFN 8 +DQKTF+ Sbjct: 72 VDQKTFH 78>NP_683706 Length = 723 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LDQKTFN 8 +DQKTF+ Sbjct: 72 VDQKTFH 78>NP_683707 Length = 746 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LDQKTFN 8 +DQKTF+ Sbjct: 72 VDQKTFH 78>NP_002166 Length = 189 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ELDQKTFNI 9 E+ Q+TFN+ Sbjct: 82 EMIQQTFNL 90>NP_001136438 Length = 1923 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ELDQKTFNI 9 +LD +TF+I Sbjct: 662 DLDNETFHI 670>NP_002160 Length = 189 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ELDQKTFNI 9 E+ Q+TFN+ Sbjct: 82 EMIQQTFNL 90>XP_006722610 Length = 1967 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ELDQKTFNI 9 +LD +TF+I Sbjct: 705 DLDNETFHI 713>XP_006710382 Length = 713 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LDQKTFN 8 +DQKTF+ Sbjct: 72 VDQKTFH 78>XP_006710381 Length = 726 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LDQKTFN 8 +DQKTF+ Sbjct: 72 VDQKTFH 78>NP_002163 Length = 189 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ELDQKTFNI 9 E+ Q+TFN+ Sbjct: 82 EMMQQTFNL 90>NP_066546 Length = 189 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ELDQKTFNI 9 E+ Q+TFN+ Sbjct: 82 EMIQQTFNL 90>NP_066401 Length = 189 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ELDQKTFNI 9 E+ Q+TFN+ Sbjct: 82 EMIQQTFNL 90>NP_002164 Length = 189 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ELDQKTFNI 9 E+ Q+TFN+ Sbjct: 82 EMIQQTFNL 90>NP_009007 Length = 458 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ELDQKTFNI 9 E+DQ+ F+I Sbjct: 189 EIDQRYFSI 197>NP_478055 Length = 828 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 ELDQKTFN 8 E+DQ T N Sbjct: 225 EIDQDTIN 232>NP_478054 Length = 918 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 ELDQKTFN 8 E+DQ T N Sbjct: 225 EIDQDTIN 232>NP_001840 Length = 1019 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 ELDQKTFN 8 E+DQ T N Sbjct: 225 EIDQDTIN 232>NP_852664 Length = 724 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 DQKTFNI 9 D+KT+N+ Sbjct: 620 DEKTWNV 626>NP_852556 Length = 454 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 DQKTFNI 9 D+KT+N+ Sbjct: 350 DEKTWNV 356>NP_653271 Length = 1454 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 QKTFNI 9 Q+TFNI Sbjct: 1273 QRTFNI 1278>NP_852665 Length = 424 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 DQKTFNI 9 D+KT+N+ Sbjct: 320 DEKTWNV 326>NP_001229395 Length = 361 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 DQKTFNI 9 D+KT+N+ Sbjct: 257 DEKTWNV 263>NP_001269353 Length = 963 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 QKTFNI 9 Q+TFNI Sbjct: 782 QRTFNI 787>NP_476517 Length = 320 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 DQKTFNI 9 D+KTF I Sbjct: 3 DEKTFRI 9>XP_005255185 Length = 258 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 LDQKTFNI 9 +D+K FN+ Sbjct: 35 IDEKCFNL 42>XP_005248599 Length = 724 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 DQKTFNI 9 D+KT+N+ Sbjct: 620 DEKTWNV 626>NP_066282 Length = 189 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ELDQKTFNI 9 E+ Q+TFN+ Sbjct: 82 EVIQQTFNL 90>NP_653275 Length = 485 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 LDQKTFNI 9 +D+K FN+ Sbjct: 262 IDEKCFNL 269Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.316 0.136 0.360 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 593,200 Number of extensions: 925 Number of successful extensions: 61 Number of sequences better than 10000.0: 61 Number of HSP's gapped: 61 Number of HSP's successfully gapped: 61 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.6 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |