Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000042 18 1935 XP_006718908 18 1935 XP_005271621 18 1935 XP_006718907 18 1935 XP_006718906 18 1935 XP_005271619 18 1935 XP_005271618 18 1935 NP_056342 17 4312 XP_005267654 17 4312 NP_060045 16 5631 XP_005256627 16 5631 XP_006721558 16 5631 XP_006721557 16 5631 XP_006721556 16 5631 XP_005256626 16 5631 XP_005270208 16 5631 XP_005270207 16 5631 XP_005270206 16 5631 NP_077302 16 5631 NP_001243757 16 7355 NP_001269255 16 7355 NP_001243756 16 7355 NP_061159 16 7355 XP_005256628 16 7355 XP_005254625 16 7355 XP_005254624 16 7355 XP_006710433 16 7355 XP_006710432 16 7355 XP_006710431 16 7355 XP_006710430 16 7355 XP_006710429 16 7355 NP_612486 15 9605 NP_001013860 15 9605 XP_006721205 15 9605 XP_005255864 15 9605 XP_006721204 15 9605 XP_006721203 15 9605 XP_006721202 15 9605 XP_006721201 15 9605 XP_005254235 15 9605 XP_005254233 15 9605 XP_005254234 15 9605 XP_006714554 15 9605 XP_005248410 15 9605 XP_006714553 15 9605 XP_005248407 15 9605 XP_005248404 15 9605 XP_005248403 15 9605 XP_006714552 15 9605 XP_005248402 15 9605>NP_000042 Length = 3056 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ELDGLALRA 9 ELD LALRA Sbjct: 2446 ELDELALRA 2454>XP_006718908 Length = 1708 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ELDGLALRA 9 ELD LALRA Sbjct: 1098 ELDELALRA 1106>XP_005271621 Length = 2708 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ELDGLALRA 9 ELD LALRA Sbjct: 2098 ELDELALRA 2106>XP_006718907 Length = 3050 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ELDGLALRA 9 ELD LALRA Sbjct: 2440 ELDELALRA 2448>XP_006718906 Length = 3056 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ELDGLALRA 9 ELD LALRA Sbjct: 2446 ELDELALRA 2454>XP_005271619 Length = 3056 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ELDGLALRA 9 ELD LALRA Sbjct: 2446 ELDELALRA 2454>XP_005271618 Length = 3056 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ELDGLALRA 9 ELD LALRA Sbjct: 2446 ELDELALRA 2454>NP_056342 Length = 808 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 ELDGLALR 8 E++GLALR Sbjct: 295 EINGLALR 302>XP_005267654 Length = 212 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ELDGLALRA 9 EL+GL +RA Sbjct: 176 ELEGLRMRA 184>NP_060045 Length = 1419 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LDGLALRA 9 +DGLA+R+ Sbjct: 704 MDGLAIRS 711Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 ELDGLA 6 ELDGLA Sbjct: 1282 ELDGLA 1287>XP_005256627 Length = 899 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LDGLALRA 9 +DGLA+R+ Sbjct: 704 MDGLAIRS 711>XP_006721558 Length = 909 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LDGLALRA 9 +DGLA+R+ Sbjct: 704 MDGLAIRS 711>XP_006721557 Length = 918 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LDGLALRA 9 +DGLA+R+ Sbjct: 704 MDGLAIRS 711>XP_006721556 Length = 1357 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LDGLALRA 9 +DGLA+R+ Sbjct: 704 MDGLAIRS 711Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 ELDGLA 6 ELDGLA Sbjct: 1220 ELDGLA 1225>XP_005256626 Length = 1388 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LDGLALRA 9 +DGLA+R+ Sbjct: 673 MDGLAIRS 680Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 ELDGLA 6 ELDGLA Sbjct: 1251 ELDGLA 1256>XP_005270208 Length = 300 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LDGLALR 8 +DGLALR Sbjct: 153 VDGLALR 159>XP_005270207 Length = 300 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LDGLALR 8 +DGLALR Sbjct: 153 VDGLALR 159>XP_005270206 Length = 387 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LDGLALR 8 +DGLALR Sbjct: 240 VDGLALR 246>NP_077302 Length = 300 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LDGLALR 8 +DGLALR Sbjct: 153 VDGLALR 159>NP_001243757 Length = 511 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 ELDGLA 6 ELDGLA Sbjct: 374 ELDGLA 379>NP_001269255 Length = 330 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 ELDGLA 6 ELDGLA Sbjct: 193 ELDGLA 198>NP_001243756 Length = 511 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 ELDGLA 6 ELDGLA Sbjct: 374 ELDGLA 379>NP_061159 Length = 1361 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ELDGLALRA 9 E+DG+ +RA Sbjct: 481 EIDGVDMRA 489>XP_005256628 Length = 511 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 ELDGLA 6 ELDGLA Sbjct: 374 ELDGLA 379>XP_005254625 Length = 1361 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ELDGLALRA 9 E+DG+ +RA Sbjct: 481 EIDGVDMRA 489>XP_005254624 Length = 1361 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ELDGLALRA 9 E+DG+ +RA Sbjct: 481 EIDGVDMRA 489>XP_006710433 Length = 1169 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 DGLALRA 9 DGL LRA Sbjct: 107 DGLGLRA 113>XP_006710432 Length = 1202 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 DGLALRA 9 DGL LRA Sbjct: 107 DGLGLRA 113>XP_006710431 Length = 1205 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 DGLALRA 9 DGL LRA Sbjct: 107 DGLGLRA 113>XP_006710430 Length = 1226 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 DGLALRA 9 DGL LRA Sbjct: 107 DGLGLRA 113>XP_006710429 Length = 1238 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 DGLALRA 9 DGL LRA Sbjct: 107 DGLGLRA 113>NP_612486 Length = 1227 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 ELDGLAL 7 EL+GLAL Sbjct: 597 ELNGLAL 603>NP_001013860 Length = 1435 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 LDGLAL 7 LDGLAL Sbjct: 483 LDGLAL 488>XP_006721205 Length = 1441 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 LDGLAL 7 LDGLAL Sbjct: 483 LDGLAL 488>XP_005255864 Length = 1372 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 LDGLAL 7 LDGLAL Sbjct: 447 LDGLAL 452>XP_006721204 Length = 1405 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 LDGLAL 7 LDGLAL Sbjct: 447 LDGLAL 452>XP_006721203 Length = 1408 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 LDGLAL 7 LDGLAL Sbjct: 483 LDGLAL 488>XP_006721202 Length = 1424 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 LDGLAL 7 LDGLAL Sbjct: 483 LDGLAL 488>XP_006721201 Length = 1430 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 LDGLAL 7 LDGLAL Sbjct: 483 LDGLAL 488>XP_005254235 Length = 1017 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 ELDGLAL 7 EL+GLAL Sbjct: 598 ELNGLAL 604>XP_005254233 Length = 1228 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 ELDGLAL 7 EL+GLAL Sbjct: 598 ELNGLAL 604>XP_005254234 Length = 1076 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 ELDGLAL 7 EL+GLAL Sbjct: 598 ELNGLAL 604>XP_006714554 Length = 1442 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LDGLALRA 9 LDG +LRA Sbjct: 868 LDGKSLRA 875>XP_005248410 Length = 2132 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LDGLALRA 9 LDG +LRA Sbjct: 1558 LDGKSLRA 1565>XP_006714553 Length = 2792 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LDGLALRA 9 LDG +LRA Sbjct: 2677 LDGKSLRA 2684>XP_005248407 Length = 3208 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LDGLALRA 9 LDG +LRA Sbjct: 2634 LDGKSLRA 2641>XP_005248404 Length = 3250 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LDGLALRA 9 LDG +LRA Sbjct: 2676 LDGKSLRA 2683>XP_005248403 Length = 3250 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LDGLALRA 9 LDG +LRA Sbjct: 2676 LDGKSLRA 2683>XP_006714552 Length = 3251 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LDGLALRA 9 LDG +LRA Sbjct: 2677 LDGKSLRA 2684>XP_005248402 Length = 3251 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LDGLALRA 9 LDG +LRA Sbjct: 2677 LDGKSLRA 2684Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.320 0.143 0.373 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 430,295 Number of extensions: 661 Number of successful extensions: 53 Number of sequences better than 10000.0: 50 Number of HSP's gapped: 53 Number of HSP's successfully gapped: 53 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.7 bits) S2: 28 (15.4 bits)
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |