Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_733751 18 1482 XP_006716142 18 1482 XP_005250088 18 1482 XP_006716141 18 1482 XP_005250085 18 1482 XP_006716140 18 1482 XP_005250084 18 1482 XP_005250083 18 1482 XP_005250082 18 1482 NP_055335 17 3301 NP_001099008 17 3301 XP_005256470 17 3301 NP_002664 17 4312 NP_001123554 17 4312 XP_006713269 17 4312 NP_079408 16 5631 NP_001073883 16 5631 NP_001186948 16 5631 NP_851853 16 5631 NP_872588 16 5631 NP_000904 16 5631 XP_006723863 16 5631 XP_005260263 16 5631 XP_006723862 16 5631 XP_005267748 16 5631 XP_006714089 16 5631 XP_006714088 16 5631 XP_005262715 16 5631 NP_002461 16 7355 NP_694551 16 7355 NP_055950 16 7355 XP_006726466 16 7355 XP_006721591 16 7355 XP_005250292 16 7355 XP_006712969 16 7355 XP_005275995 16 7355 NP_620688 15 9605 NP_776297 15 9605 NP_001230301 15 9605 NP_001820 15 9605 NP_001230303 15 9605 NP_005537 15 9605 NP_001243000 15 9605 NP_036329 15 9605 NP_001135741 15 9605 NP_000812 15 9605 NP_542165 15 9605 NP_899662 15 9605 NP_002886 15 9605 NP_005795 15 9605 NP_001271204 15 9605 NP_037511 15 9605 NP_004631 15 9605 NP_001138490 15 9605 XP_006723905 15 9605 XP_005257603 15 9605 XP_006722058 15 9605 XP_005257602 15 9605 XP_005254929 15 9605 XP_006718884 15 9605 XP_006718882 15 9605 XP_006718879 15 9605 XP_006717146 15 9605 XP_005266132 15 9605 XP_006717095 15 9605 XP_006717094 15 9605 XP_005251923 15 9605 XP_005262783 15 9605 XP_005264316 15 9605>NP_733751 Length = 4911 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ELALRRDLQ 9 ELALRR LQ Sbjct: 4451 ELALRRGLQ 4459>XP_006716142 Length = 4927 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ELALRRDLQ 9 ELALRR LQ Sbjct: 4467 ELALRRGLQ 4475>XP_005250088 Length = 4928 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ELALRRDLQ 9 ELALRR LQ Sbjct: 4468 ELALRRGLQ 4476>XP_006716141 Length = 4959 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ELALRRDLQ 9 ELALRR LQ Sbjct: 4499 ELALRRGLQ 4507>XP_005250085 Length = 4979 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ELALRRDLQ 9 ELALRR LQ Sbjct: 4523 ELALRRGLQ 4531>XP_006716140 Length = 4982 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ELALRRDLQ 9 ELALRR LQ Sbjct: 4522 ELALRRGLQ 4530>XP_005250084 Length = 4982 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ELALRRDLQ 9 ELALRR LQ Sbjct: 4522 ELALRRGLQ 4530>XP_005250083 Length = 4982 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ELALRRDLQ 9 ELALRR LQ Sbjct: 4522 ELALRRGLQ 4530>XP_005250082 Length = 4983 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ELALRRDLQ 9 ELALRR LQ Sbjct: 4523 ELALRRGLQ 4531>NP_055335 Length = 1328 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 ELALRRDLQ 9 E ALRRD Q Sbjct: 817 EKALRRDFQ 825>NP_001099008 Length = 1332 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 ELALRRDLQ 9 E ALRRD Q Sbjct: 817 EKALRRDFQ 825>XP_005256470 Length = 1120 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 ELALRRDLQ 9 E ALRRD Q Sbjct: 817 EKALRRDFQ 825>NP_002664 Length = 2135 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 LALRRDLQ 9 L LRRDLQ Sbjct: 231 LFLRRDLQ 238>NP_001123554 Length = 2135 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 LALRRDLQ 9 L LRRDLQ Sbjct: 231 LFLRRDLQ 238>XP_006713269 Length = 2052 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 LALRRDLQ 9 L LRRDLQ Sbjct: 148 LFLRRDLQ 155>NP_079408 Length = 1342 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LALRRDLQ 9 L +RRDLQ Sbjct: 750 LEMRRDLQ 757>NP_001073883 Length = 2028 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 ALRRDLQ 9 ALRRDL+ Sbjct: 798 ALRRDLE 804>NP_001186948 Length = 370 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 ALRRDLQ 9 ALRRD+Q Sbjct: 338 ALRRDVQ 344>NP_851853 Length = 503 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 ELALRRDLQ 9 +L LRR+LQ Sbjct: 6 DLELRRELQ 14>NP_872588 Length = 370 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 ALRRDLQ 9 ALRRD+Q Sbjct: 338 ALRRDVQ 344>NP_000904 Length = 370 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 ALRRDLQ 9 ALRRD+Q Sbjct: 338 ALRRDVQ 344>XP_006723863 Length = 289 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 ALRRDLQ 9 ALRRD+Q Sbjct: 257 ALRRDVQ 263>XP_005260263 Length = 365 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 ALRRDLQ 9 ALRRD+Q Sbjct: 333 ALRRDVQ 339>XP_006723862 Length = 370 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 ALRRDLQ 9 ALRRD+Q Sbjct: 338 ALRRDVQ 344>XP_005267748 Length = 1535 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 ALRRDLQ 9 ALRRDL+ Sbjct: 798 ALRRDLE 804>XP_006714089 Length = 1281 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LALRRDLQ 9 L +RRDLQ Sbjct: 750 LEMRRDLQ 757>XP_006714088 Length = 1283 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LALRRDLQ 9 L +RRDLQ Sbjct: 691 LEMRRDLQ 698>XP_005262715 Length = 1320 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LALRRDLQ 9 L +RRDLQ Sbjct: 728 LEMRRDLQ 735>NP_002461 Length = 1940 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LALRRDLQ 9 L LRRDL+ Sbjct: 1173 LKLRRDLE 1180>NP_694551 Length = 534 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LRRDLQ 9 LRRDLQ Sbjct: 464 LRRDLQ 469>NP_055950 Length = 2012 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LALRRDLQ 9 ++LRRDL+ Sbjct: 433 ISLRRDLE 440>XP_006726466 Length = 1310 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 ELALRRD 7 ELALRR+ Sbjct: 130 ELALRRE 136>XP_006721591 Length = 1940 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LALRRDLQ 9 L LRRDL+ Sbjct: 1173 LKLRRDLE 1180>XP_005250292 Length = 1654 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LALRRDLQ 9 ++LRRDL+ Sbjct: 75 ISLRRDLE 82>XP_006712969 Length = 1310 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 ELALRRD 7 ELALRR+ Sbjct: 130 ELALRRE 136>XP_005275995 Length = 488 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 ELALRRD 7 ELALRR+ Sbjct: 130 ELALRRE 136>NP_620688 Length = 1095 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LALRRDLQ 9 L LRRDL+ Sbjct: 94 LQLRRDLR 101>NP_776297 Length = 866 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 ALRRDL 8 ALRRDL Sbjct: 707 ALRRDL 712>NP_001230301 Length = 791 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 ALRRDL 8 ALRRDL Sbjct: 680 ALRRDL 685>NP_001820 Length = 818 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 ALRRDL 8 ALRRDL Sbjct: 707 ALRRDL 712>NP_001230303 Length = 791 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 ALRRDL 8 ALRRDL Sbjct: 680 ALRRDL 685>NP_005537 Length = 620 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 ELALRRD 7 ELALRR+ Sbjct: 189 ELALRRN 195>NP_001243000 Length = 5207 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LALRRDL 8 LAL+RDL Sbjct: 4788 LALQRDL 4794>NP_036329 Length = 1069 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 ELALRRDL 8 ++ALR+DL Sbjct: 867 KIALRKDL 874>NP_001135741 Length = 701 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ELALRRDL 8 ELAL +DL Sbjct: 551 ELALEQDL 558>NP_000812 Length = 758 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ELALRRDL 8 ELAL +DL Sbjct: 608 ELALEQDL 615>NP_542165 Length = 428 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ELALRRDLQ 9 +L +RRD+Q Sbjct: 204 QLDMRRDVQ 212>NP_899662 Length = 1014 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 ALRRDLQ 9 +LRRD+Q Sbjct: 631 SLRRDMQ 637>NP_002886 Length = 1068 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 ALRRDLQ 9 +LRRD+Q Sbjct: 631 SLRRDMQ 637>NP_005795 Length = 427 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ELALRRDLQ 9 +L +RRD+Q Sbjct: 203 QLDMRRDVQ 211>NP_001271204 Length = 399 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ELALRRDLQ 9 E+ +RR+LQ Sbjct: 9 EIKVRRELQ 17>NP_037511 Length = 492 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 ALRRDL 8 ALRRDL Sbjct: 144 ALRRDL 149>NP_004631 Length = 428 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 ELALRRDLQ 9 +L +RRD+Q Sbjct: 204 QLDMRRDVQ 212>NP_001138490 Length = 210 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 LALRRD 7 LALRRD Sbjct: 45 LALRRD 50>XP_006723905 Length = 896 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 ALRRDLQ 9 +LRRD+Q Sbjct: 459 SLRRDMQ 465>XP_005257603 Length = 5256 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LALRRDL 8 LAL+RDL Sbjct: 4837 LALQRDL 4843>XP_006722058 Length = 5256 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LALRRDL 8 LAL+RDL Sbjct: 4837 LALQRDL 4843>XP_005257602 Length = 5256 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LALRRDL 8 LAL+RDL Sbjct: 4837 LALQRDL 4843>XP_005254929 Length = 1122 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LALRRDLQ 9 L LRRDL+ Sbjct: 94 LQLRRDLR 101>XP_006718884 Length = 267 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 LALRRD 7 LALRRD Sbjct: 45 LALRRD 50>XP_006718882 Length = 182 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 LALRRD 7 LALRRD Sbjct: 45 LALRRD 50>XP_006718879 Length = 257 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 LALRRD 7 LALRRD Sbjct: 45 LALRRD 50>XP_006717146 Length = 509 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 ALRRDL 8 ALRRDL Sbjct: 144 ALRRDL 149>XP_005266132 Length = 565 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 ALRRDL 8 ALRRDL Sbjct: 144 ALRRDL 149>XP_006717095 Length = 900 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 ELALRRDL 8 ++ALR+DL Sbjct: 698 KIALRKDL 705>XP_006717094 Length = 1069 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 ELALRRDL 8 ++ALR+DL Sbjct: 867 KIALRKDL 874>XP_005251923 Length = 1069 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 ELALRRDL 8 ++ALR+DL Sbjct: 867 KIALRKDL 874>XP_005262783 Length = 839 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 ALRRDL 8 ALRRDL Sbjct: 680 ALRRDL 685>XP_005264316 Length = 756 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 ELALRRDL 8 ELAL +DL Sbjct: 608 ELALEQDL 615Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.328 0.143 0.360 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 448,128 Number of extensions: 719 Number of successful extensions: 69 Number of sequences better than 10000.0: 69 Number of HSP's gapped: 69 Number of HSP's successfully gapped: 69 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.0 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |