Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_008835 19 869 NP_001075109 19 869 NP_004095 17 4312 XP_005255097 16 5631 NP_071401 16 7355 NP_001273561 16 7355 NP_001273560 16 7355 NP_060232 16 7355 NP_055704 16 7355 NP_001229236 16 7355 NP_001229238 16 7355 XP_006725610 16 7355 XP_006725608 16 7355 XP_005254565 16 7355 XP_006720651 16 7355 XP_006719923 16 7355 XP_006719922 16 7355 XP_005266558 16 7355 XP_006719921 16 7355 XP_005266556 16 7355 XP_005266555 16 7355 XP_006719920 16 7355 XP_005266554 16 7355 XP_005266553 16 7355 XP_006719919 16 7355 XP_005266551 16 7355 XP_005266550 16 7355 XP_005266549 16 7355 XP_006719918 16 7355 XP_005266548 16 7355 XP_006717425 16 7355 XP_005252402 16 7355 NP_000362 15 9605 NP_001389 15 9605 XP_005258667 15 9605>NP_008835 Length = 4128 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ELAFTASDR 9 ELA TASDR Sbjct: 916 ELALTASDR 924>NP_001075109 Length = 4097 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 ELAFTASDR 9 ELA TASDR Sbjct: 916 ELALTASDR 924>NP_004095 Length = 2511 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 ELAFTASDR 9 +L++TA+DR Sbjct: 1267 QLSYTATDR 1275>XP_005255097 Length = 287 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LAFTASDR 9 +AFTAS R Sbjct: 1 MAFTASQR 8>NP_071401 Length = 980 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 AFTASDR 9 AFT SDR Sbjct: 870 AFTESDR 876>NP_001273561 Length = 983 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 AFTASDR 9 AFT SDR Sbjct: 873 AFTESDR 879>NP_001273560 Length = 1009 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 AFTASDR 9 AFT SDR Sbjct: 899 AFTESDR 905>NP_060232 Length = 777 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 LAFTASDR 9 L FTA DR Sbjct: 542 LQFTAKDR 549>NP_055704 Length = 1037 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 AFTASD 8 AFTASD Sbjct: 137 AFTASD 142>NP_001229236 Length = 1038 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 AFTASD 8 AFTASD Sbjct: 137 AFTASD 142>NP_001229238 Length = 939 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 AFTASD 8 AFTASD Sbjct: 105 AFTASD 110>XP_006725610 Length = 529 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 LAFTASDR 9 L FTA DR Sbjct: 294 LQFTAKDR 301>XP_006725608 Length = 582 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 LAFTASDR 9 L FTA DR Sbjct: 542 LQFTAKDR 549>XP_005254565 Length = 529 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 LAFTASDR 9 L FTA DR Sbjct: 294 LQFTAKDR 301>XP_006720651 Length = 582 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 LAFTASDR 9 L FTA DR Sbjct: 542 LQFTAKDR 549>XP_006719923 Length = 734 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 AFTASDR 9 AFT SDR Sbjct: 624 AFTESDR 630>XP_006719922 Length = 942 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 AFTASDR 9 AFT SDR Sbjct: 912 AFTESDR 918>XP_005266558 Length = 980 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 AFTASDR 9 AFT SDR Sbjct: 870 AFTESDR 876>XP_006719921 Length = 983 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 AFTASDR 9 AFT SDR Sbjct: 873 AFTESDR 879>XP_005266556 Length = 995 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 AFTASDR 9 AFT SDR Sbjct: 885 AFTESDR 891>XP_005266555 Length = 998 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 AFTASDR 9 AFT SDR Sbjct: 888 AFTESDR 894>XP_006719920 Length = 999 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 AFTASDR 9 AFT SDR Sbjct: 912 AFTESDR 918>XP_005266554 Length = 1000 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 AFTASDR 9 AFT SDR Sbjct: 912 AFTESDR 918>XP_005266553 Length = 1007 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 AFTASDR 9 AFT SDR Sbjct: 897 AFTESDR 903>XP_006719919 Length = 1009 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 AFTASDR 9 AFT SDR Sbjct: 899 AFTESDR 905>XP_005266551 Length = 1012 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 AFTASDR 9 AFT SDR Sbjct: 902 AFTESDR 908>XP_005266550 Length = 1017 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 AFTASDR 9 AFT SDR Sbjct: 907 AFTESDR 913>XP_005266549 Length = 1019 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 AFTASDR 9 AFT SDR Sbjct: 909 AFTESDR 915>XP_006719918 Length = 1021 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 AFTASDR 9 AFT SDR Sbjct: 911 AFTESDR 917>XP_005266548 Length = 1022 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 AFTASDR 9 AFT SDR Sbjct: 912 AFTESDR 918>XP_006717425 Length = 867 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 AFTASD 8 AFTASD Sbjct: 137 AFTASD 142>XP_005252402 Length = 971 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 AFTASD 8 AFTASD Sbjct: 137 AFTASD 142>NP_000362 Length = 147 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 ELAFTASD 8 E+ FTA+D Sbjct: 112 EVVFTAND 119>NP_001389 Length = 328 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 ELAFTA 6 ELAFTA Sbjct: 224 ELAFTA 229>XP_005258667 Length = 197 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 ELAFTA 6 ELAFTA Sbjct: 93 ELAFTA 98Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.317 0.124 0.317 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 327,103 Number of extensions: 337 Number of successful extensions: 35 Number of sequences better than 10000.0: 35 Number of HSP's gapped: 35 Number of HSP's successfully gapped: 35 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.8 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |