Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_060101 18 1135 NP_115695 17 3301 NP_001012985 17 4312 NP_001009182 17 4312 NP_003607 17 4312 XP_005263404 17 4312 XP_005263403 17 4312 XP_006714474 17 4312 XP_006714473 17 4312 XP_006714472 17 4312 XP_005263402 17 4312 XP_005263401 17 4312 XP_005263399 17 4312 XP_005263400 17 4312 XP_006714471 17 4312 XP_005263398 17 4312 NP_001866 16 5631 NP_001116105 16 5631 NP_848613 16 5631 NP_997296 16 5631 XP_005256671 16 5631 NP_002105 16 7355 NP_001243000 16 7355 NP_001138508 16 7355 NP_031383 16 7355 NP_060496 16 7355 NP_079544 16 7355 XP_005257603 16 7355 XP_006722058 16 7355 XP_005257602 16 7355 XP_006720324 16 7355 XP_005268158 16 7355 XP_005249099 16 7355 NP_000739 15 9605 NP_003142 15 9605 NP_001230764 15 9605 NP_001027452 15 9605 NP_000915 15 9605 NP_003638 15 9605 NP_001138783 15 9605 NP_001257972 15 9605 NP_002657 15 9605 NP_001274168 15 9605 NP_079467 15 9605 NP_001159447 15 9605 NP_001275698 15 9605 NP_001275697 15 9605 XP_005259977 15 9605 XP_005259975 15 9605 XP_005259974 15 9605 XP_005257806 15 9605 XP_006722206 15 9605 XP_005254991 15 9605 XP_006719514 15 9605 XP_005246877 15 9605 XP_006712782 15 9605 XP_005246874 15 9605 XP_005245556 15 9605 XP_006711206 15 9605>NP_060101 Length = 1712 Score = 18.5 bits (36), Expect = 1135 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 EKVPALFLL 9 EK+PALF L Sbjct: 1125 EKLPALFFL 1133>NP_115695 Length = 188 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 VPALFLL 9 +PALFLL Sbjct: 139 IPALFLL 145>NP_001012985 Length = 1706 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 EKVPALFLL 9 +K+PA+F L Sbjct: 1105 DKLPAIFFL 1113>NP_001009182 Length = 265 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 EKVPALFLL 9 E+VPAL LL Sbjct: 239 ERVPALNLL 247>NP_003607 Length = 280 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 EKVPALFLL 9 E+VPAL LL Sbjct: 254 ERVPALNLL 262>XP_005263404 Length = 1308 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 EKVPALFLL 9 +K+PA+F L Sbjct: 1105 DKLPAIFFL 1113>XP_005263403 Length = 1672 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 EKVPALFLL 9 +K+PA+F L Sbjct: 1105 DKLPAIFFL 1113>XP_006714474 Length = 1674 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 EKVPALFLL 9 +K+PA+F L Sbjct: 1073 DKLPAIFFL 1081>XP_006714473 Length = 1675 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 EKVPALFLL 9 +K+PA+F L Sbjct: 1073 DKLPAIFFL 1081>XP_006714472 Length = 1706 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 EKVPALFLL 9 +K+PA+F L Sbjct: 1105 DKLPAIFFL 1113>XP_005263402 Length = 1707 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 EKVPALFLL 9 +K+PA+F L Sbjct: 1105 DKLPAIFFL 1113>XP_005263401 Length = 1707 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 EKVPALFLL 9 +K+PA+F L Sbjct: 1105 DKLPAIFFL 1113>XP_005263399 Length = 1707 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 EKVPALFLL 9 +K+PA+F L Sbjct: 1105 DKLPAIFFL 1113>XP_005263400 Length = 1707 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 EKVPALFLL 9 +K+PA+F L Sbjct: 1105 DKLPAIFFL 1113>XP_006714471 Length = 1707 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 EKVPALFLL 9 +K+PA+F L Sbjct: 1105 DKLPAIFFL 1113>XP_005263398 Length = 1707 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 EKVPALFLL 9 +K+PA+F L Sbjct: 1105 DKLPAIFFL 1113>NP_001866 Length = 1500 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 EKVPALF 7 EKVPA++ Sbjct: 156 EKVPAIY 162>NP_001116105 Length = 1506 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 EKVPALF 7 EKVPA++ Sbjct: 162 EKVPAIY 168>NP_848613 Length = 508 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 EKVPALFL 8 E++PAL+L Sbjct: 417 ERLPALYL 424>NP_997296 Length = 129 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 VPALFLL 9 +PALFLL Sbjct: 10 LPALFLL 16>XP_005256671 Length = 508 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 EKVPALFL 8 E++PAL+L Sbjct: 417 ERLPALYL 424>NP_002105 Length = 2718 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 EKVPALFLL 9 +KVP+ F+L Sbjct: 1628 QKVPSSFML 1636>NP_001243000 Length = 5207 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 EKVPALFLL 9 +KVP LF L Sbjct: 2048 QKVPVLFHL 2056>NP_001138508 Length = 737 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 EKVPALF 7 EK+P+LF Sbjct: 326 EKLPSLF 332>NP_031383 Length = 738 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 EKVPALF 7 EK+P+LF Sbjct: 326 EKLPSLF 332>NP_060496 Length = 963 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 EKVPALFL 8 +KVP +FL Sbjct: 884 KKVPTIFL 891>NP_079544 Length = 319 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 VPALFLL 9 VP LFLL Sbjct: 121 VPGLFLL 127>XP_005257603 Length = 5256 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 EKVPALFLL 9 +KVP LF L Sbjct: 2097 QKVPVLFHL 2105>XP_006722058 Length = 5256 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 EKVPALFLL 9 +KVP LF L Sbjct: 2097 QKVPVLFHL 2105>XP_005257602 Length = 5256 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 EKVPALFLL 9 +KVP LF L Sbjct: 2097 QKVPVLFHL 2105>XP_006720324 Length = 319 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 VPALFLL 9 VP LFLL Sbjct: 121 VPGLFLL 127>XP_005268158 Length = 319 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 VPALFLL 9 VP LFLL Sbjct: 121 VPGLFLL 127>XP_005249099 Length = 2026 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 EKVPALFLL 9 +KVP+ F+L Sbjct: 1628 QKVPSSFML 1636>NP_000739 Length = 502 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 EKVPALFLL 9 EK+PAL + Sbjct: 341 EKLPALLFM 349>NP_003142 Length = 748 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 EKVPALFLL 9 +K+P FLL Sbjct: 589 DKMPGTFLL 597>NP_001230764 Length = 748 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 EKVPALFLL 9 +K+P FLL Sbjct: 589 DKMPGTFLL 597>NP_001027452 Length = 251 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 KVPALFL 8 KVP+LF+ Sbjct: 204 KVPSLFV 210>NP_000915 Length = 536 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 KVPALFLL 9 K+P +FL+ Sbjct: 198 KIPTVFLM 205>NP_003638 Length = 567 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 EKVPALF 7 EK P+LF Sbjct: 391 EKAPSLF 397>NP_001138783 Length = 522 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 EKVPAL 6 EK+PAL Sbjct: 100 EKIPAL 105>NP_001257972 Length = 510 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 KVPALFLL 9 KVP FLL Sbjct: 434 KVPGSFLL 441>NP_002657 Length = 522 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 EKVPAL 6 EK+PAL Sbjct: 100 EKIPAL 105>NP_001274168 Length = 306 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KVPALFLL 9 K P+LF+L Sbjct: 266 KFPSLFIL 273>NP_079467 Length = 932 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 KVPALFL 8 K+P LFL Sbjct: 761 KIPMLFL 767>NP_001159447 Length = 516 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 KVPALFLL 9 K+P +FL+ Sbjct: 178 KIPTVFLM 185>NP_001275698 Length = 495 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 KVPALFLL 9 K+P +FL+ Sbjct: 157 KIPTVFLM 164>NP_001275697 Length = 399 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 KVPALFLL 9 K+P +FL+ Sbjct: 61 KIPTVFLM 68>XP_005259977 Length = 494 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 KVPALFLL 9 KVP FLL Sbjct: 418 KVPGSFLL 425>XP_005259975 Length = 502 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 KVPALFLL 9 KVP FLL Sbjct: 426 KVPGSFLL 433>XP_005259974 Length = 520 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 KVPALFLL 9 KVP FLL Sbjct: 444 KVPGSFLL 451>XP_005257806 Length = 409 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 EKVPALF 7 EK P+LF Sbjct: 391 EKAPSLF 397>XP_006722206 Length = 434 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 EKVPALF 7 EK P+LF Sbjct: 391 EKAPSLF 397>XP_005254991 Length = 522 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 EKVPAL 6 EK+PAL Sbjct: 100 EKIPAL 105>XP_006719514 Length = 399 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 KVPALFLL 9 K+P +FL+ Sbjct: 61 KIPTVFLM 68>XP_005246877 Length = 251 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 KVPALFL 8 KVP+LF+ Sbjct: 204 KVPSLFV 210>XP_006712782 Length = 748 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 EKVPALFLL 9 +K+P FLL Sbjct: 589 DKMPGTFLL 597>XP_005246874 Length = 757 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 EKVPALFLL 9 +K+P FLL Sbjct: 598 DKMPGTFLL 606>XP_005245556 Length = 933 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 KVPALFL 8 K+P LFL Sbjct: 762 KIPMLFL 768>XP_006711206 Length = 502 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 EKVPALFLL 9 EK+PAL + Sbjct: 341 EKLPALLFM 349Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.331 0.151 0.421 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 665,949 Number of extensions: 1062 Number of successful extensions: 59 Number of sequences better than 10000.0: 59 Number of HSP's gapped: 59 Number of HSP's successfully gapped: 59 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.1 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |