Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_722576 19 869 XP_005262424 19 869 NP_001138828 16 5631 NP_001138827 16 5631 NP_001078926 16 5631 NP_001020087 16 5631 NP_060961 16 5631 NP_958861 16 5631 NP_001273765 16 5631 XP_005277698 16 5631 XP_006717179 16 5631 XP_005277697 16 5631 XP_005277696 16 5631 XP_005252048 16 5631 XP_005277694 16 5631 XP_006716978 16 5631 XP_005272812 16 5631 XP_005272811 16 5631 XP_006716977 16 5631 XP_005272808 16 5631 XP_005272807 16 5631 XP_005272806 16 5631 XP_005272805 16 5631 XP_005251574 16 5631 XP_005251573 16 5631 XP_005251572 16 5631 XP_005251571 16 5631 XP_005251570 16 5631 XP_005263663 16 5631 XP_005263662 16 5631 XP_005263661 16 5631 XP_005263660 16 5631 XP_005263659 16 5631 XP_005263657 16 5631 NP_742000 16 5631 NP_490597 16 7355 NP_055114 16 7355 NP_005568 15 9605>NP_722576 Length = 3080 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 EKSTAVSQQ 9 EKST VSQQ Sbjct: 238 EKSTTVSQQ 246>XP_005262424 Length = 2875 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 EKSTAVSQQ 9 EKST VSQQ Sbjct: 33 EKSTTVSQQ 41>NP_001138828 Length = 376 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 EKSTAVSQ 8 EKS AVSQ Sbjct: 85 EKSLAVSQ 92>NP_001138827 Length = 359 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 EKSTAVSQ 8 EKS AVSQ Sbjct: 49 EKSLAVSQ 56>NP_001078926 Length = 395 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 EKSTAVSQ 8 EKS AVSQ Sbjct: 85 EKSLAVSQ 92>NP_001020087 Length = 347 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 EKSTAVSQ 8 EKS AVSQ Sbjct: 85 EKSLAVSQ 92>NP_060961 Length = 395 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 EKSTAVSQ 8 EKS AVSQ Sbjct: 85 EKSLAVSQ 92>NP_958861 Length = 395 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 EKSTAVSQ 8 EKS AVSQ Sbjct: 85 EKSLAVSQ 92>NP_001273765 Length = 113 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 EKSTAVSQ 8 EKS AVSQ Sbjct: 85 EKSLAVSQ 92>XP_005277698 Length = 241 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 EKSTAVSQ 8 EKS AVSQ Sbjct: 85 EKSLAVSQ 92>XP_006717179 Length = 320 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 EKSTAVSQ 8 EKS AVSQ Sbjct: 85 EKSLAVSQ 92>XP_005277697 Length = 347 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 EKSTAVSQ 8 EKS AVSQ Sbjct: 85 EKSLAVSQ 92>XP_005277696 Length = 366 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 EKSTAVSQ 8 EKS AVSQ Sbjct: 85 EKSLAVSQ 92>XP_005252048 Length = 375 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 EKSTAVSQ 8 EKS AVSQ Sbjct: 85 EKSLAVSQ 92>XP_005277694 Length = 376 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 EKSTAVSQ 8 EKS AVSQ Sbjct: 85 EKSLAVSQ 92>XP_006716978 Length = 210 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 EKSTAVSQ 8 EKS AVSQ Sbjct: 85 EKSLAVSQ 92>XP_005272812 Length = 239 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 EKSTAVSQ 8 EKS AVSQ Sbjct: 85 EKSLAVSQ 92>XP_005272811 Length = 241 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 EKSTAVSQ 8 EKS AVSQ Sbjct: 85 EKSLAVSQ 92>XP_006716977 Length = 320 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 EKSTAVSQ 8 EKS AVSQ Sbjct: 85 EKSLAVSQ 92>XP_005272808 Length = 366 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 EKSTAVSQ 8 EKS AVSQ Sbjct: 85 EKSLAVSQ 92>XP_005272807 Length = 375 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 EKSTAVSQ 8 EKS AVSQ Sbjct: 85 EKSLAVSQ 92>XP_005272806 Length = 376 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 EKSTAVSQ 8 EKS AVSQ Sbjct: 85 EKSLAVSQ 92>XP_005272805 Length = 395 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 EKSTAVSQ 8 EKS AVSQ Sbjct: 85 EKSLAVSQ 92>XP_005251574 Length = 241 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 EKSTAVSQ 8 EKS AVSQ Sbjct: 85 EKSLAVSQ 92>XP_005251573 Length = 279 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 EKSTAVSQ 8 EKS AVSQ Sbjct: 49 EKSLAVSQ 56>XP_005251572 Length = 347 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 EKSTAVSQ 8 EKS AVSQ Sbjct: 85 EKSLAVSQ 92>XP_005251571 Length = 366 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 EKSTAVSQ 8 EKS AVSQ Sbjct: 85 EKSLAVSQ 92>XP_005251570 Length = 375 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 EKSTAVSQ 8 EKS AVSQ Sbjct: 85 EKSLAVSQ 92>XP_005263663 Length = 241 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 EKSTAVSQ 8 EKS AVSQ Sbjct: 85 EKSLAVSQ 92>XP_005263662 Length = 279 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 EKSTAVSQ 8 EKS AVSQ Sbjct: 49 EKSLAVSQ 56>XP_005263661 Length = 347 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 EKSTAVSQ 8 EKS AVSQ Sbjct: 85 EKSLAVSQ 92>XP_005263660 Length = 359 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 EKSTAVSQ 8 EKS AVSQ Sbjct: 49 EKSLAVSQ 56>XP_005263659 Length = 366 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 EKSTAVSQ 8 EKS AVSQ Sbjct: 85 EKSLAVSQ 92>XP_005263657 Length = 376 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 EKSTAVSQ 8 EKS AVSQ Sbjct: 85 EKSLAVSQ 92>NP_742000 Length = 395 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 EKSTAVSQ 8 EKS AVSQ Sbjct: 85 EKSLAVSQ 92>NP_490597 Length = 1362 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 EKSTAVSQQ 9 EKS+ VS+Q Sbjct: 345 EKSSKVSEQ 353>NP_055114 Length = 722 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 EKSTAVSQQ 9 EKS+ VS+Q Sbjct: 345 EKSSKVSEQ 353>NP_005568 Length = 2040 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 STAVSQQ 9 STAVS+Q Sbjct: 1256 STAVSEQ 1262Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.275 0.0883 0.182 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 261,723 Number of extensions: 374 Number of successful extensions: 38 Number of sequences better than 10000.0: 38 Number of HSP's gapped: 38 Number of HSP's successfully gapped: 38 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 18 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (14.6 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |