Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_008835 20 390 NP_001075109 20 390 NP_001243779 17 2528 NP_596869 17 2528 XP_006712787 17 2528 XP_006712786 17 2528 NP_001254479 17 2528 NP_001578 17 3301 NP_000267 17 3301 XP_005262479 17 3301 XP_005262478 17 3301 XP_006724824 17 3301 XP_006724823 17 3301 NP_477520 16 5631 NP_001008563 16 5631 NP_006667 16 5631 NP_001103773 16 5631 NP_001139266 16 5631 NP_005236 16 5631 NP_009149 16 5631 XP_006717001 16 5631 XP_005251722 16 5631 XP_006714202 16 5631 XP_005262892 16 5631 XP_005262891 16 5631 NP_115977 16 7355 NP_778236 16 7355 NP_055318 16 7355 NP_065987 16 7355 NP_061837 16 7355 XP_005261199 16 7355 XP_005261198 16 7355 XP_006724079 16 7355 XP_006724078 16 7355 XP_006724077 16 7355 XP_005261197 16 7355 XP_005261196 16 7355 XP_005253648 16 7355 NP_689807 15 9605 NP_036385 15 9605 NP_001139406 15 9605 NP_001139405 15 9605 NP_001138762 15 9605 NP_938018 15 9605 NP_001129477 15 9605 NP_001005853 15 9605 NP_001129478 15 9605 NP_443163 15 9605 NP_001171643 15 9605 NP_000810 15 9605 NP_009212 15 9605 XP_006724053 15 9605 XP_006724052 15 9605 XP_005260998 15 9605 XP_006724051 15 9605 XP_005254260 15 9605 XP_005254259 15 9605 XP_006714138 15 9605 XP_005247061 15 9605 NP_780294 15 9605 NP_775486 15 9605>NP_008835 Length = 4128 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 EKRLSFVVP 9 EKRLSF VP Sbjct: 889 EKRLSFAVP 897>NP_001075109 Length = 4097 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 EKRLSFVVP 9 EKRLSF VP Sbjct: 889 EKRLSFAVP 897>NP_001243779 Length = 34350 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 EKRLSFVVP 9 E++LSF VP Sbjct: 10398 EEKLSFAVP 10406>NP_596869 Length = 33423 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 EKRLSFVVP 9 E++LSF VP Sbjct: 9471 EEKLSFAVP 9479>XP_006712787 Length = 33978 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 EKRLSFVVP 9 E++LSF VP Sbjct: 10399 EEKLSFAVP 10407>XP_006712786 Length = 35484 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 EKRLSFVVP 9 E++LSF VP Sbjct: 10399 EEKLSFAVP 10407>NP_001254479 Length = 35991 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 EKRLSFVVP 9 E++LSF VP Sbjct: 10715 EEKLSFAVP 10723>NP_001578 Length = 893 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 RLSFVVP 9 R+SFVVP Sbjct: 396 RMSFVVP 402>NP_000267 Length = 901 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 RLSFVVP 9 R+SFVVP Sbjct: 396 RMSFVVP 402>XP_005262479 Length = 744 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 RLSFVVP 9 R+SFVVP Sbjct: 239 RMSFVVP 245>XP_005262478 Length = 835 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 RLSFVVP 9 R+SFVVP Sbjct: 330 RMSFVVP 336>XP_006724824 Length = 890 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 RLSFVVP 9 R+SFVVP Sbjct: 393 RMSFVVP 399>XP_006724823 Length = 898 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 RLSFVVP 9 R+SFVVP Sbjct: 393 RMSFVVP 399>NP_477520 Length = 488 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 EKRLSFVV 8 E RLSF+V Sbjct: 77 EMRLSFIV 84>NP_001008563 Length = 914 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 EKRLSFVVP 9 +KR S+VVP Sbjct: 202 KKRPSYVVP 210>NP_006667 Length = 914 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 EKRLSFVVP 9 +KR S+VVP Sbjct: 202 KKRPSYVVP 210>NP_001103773 Length = 914 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 EKRLSFVVP 9 +KR S+VVP Sbjct: 202 KKRPSYVVP 210>NP_001139266 Length = 489 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 EKRLSFVV 8 E RLSF+V Sbjct: 77 EMRLSFIV 84>NP_005236 Length = 4588 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 RLSFVVP 9 RLSFV P Sbjct: 3766 RLSFVTP 3772>NP_009149 Length = 664 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 EKRLSFVVP 9 ++RL FV P Sbjct: 320 DRRLGFVAP 328>XP_006717001 Length = 914 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 EKRLSFVVP 9 +KR S+VVP Sbjct: 202 KKRPSYVVP 210>XP_005251722 Length = 914 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 EKRLSFVVP 9 +KR S+VVP Sbjct: 202 KKRPSYVVP 210>XP_006714202 Length = 4588 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 RLSFVVP 9 RLSFV P Sbjct: 3766 RLSFVTP 3772>XP_005262892 Length = 4600 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 RLSFVVP 9 RLSFV P Sbjct: 3766 RLSFVTP 3772>XP_005262891 Length = 4600 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 RLSFVVP 9 RLSFV P Sbjct: 3766 RLSFVTP 3772>NP_115977 Length = 353 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 EKRLSFV 7 EK+LSF+ Sbjct: 236 EKKLSFI 242>NP_778236 Length = 666 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KRLSFVVP 9 K L+FV+P Sbjct: 262 KTLAFVIP 269>NP_055318 Length = 2785 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 EKRLSFVVP 9 EKRL V+P Sbjct: 2400 EKRLGTVLP 2408>NP_065987 Length = 600 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KRLSFVVP 9 K L+FV+P Sbjct: 59 KTLAFVIP 66>NP_061837 Length = 533 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LSFVVP 9 LSFVVP Sbjct: 221 LSFVVP 226>XP_005261199 Length = 429 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LSFVVP 9 LSFVVP Sbjct: 88 LSFVVP 93>XP_005261198 Length = 533 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LSFVVP 9 LSFVVP Sbjct: 221 LSFVVP 226>XP_006724079 Length = 562 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LSFVVP 9 LSFVVP Sbjct: 221 LSFVVP 226>XP_006724078 Length = 562 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LSFVVP 9 LSFVVP Sbjct: 221 LSFVVP 226>XP_006724077 Length = 562 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LSFVVP 9 LSFVVP Sbjct: 221 LSFVVP 226>XP_005261197 Length = 562 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LSFVVP 9 LSFVVP Sbjct: 221 LSFVVP 226>XP_005261196 Length = 562 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LSFVVP 9 LSFVVP Sbjct: 221 LSFVVP 226>XP_005253648 Length = 452 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KRLSFVVP 9 K L+FV+P Sbjct: 59 KTLAFVIP 66>NP_689807 Length = 444 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 LSFVVP 9 LSF+VP Sbjct: 410 LSFIVP 415>NP_036385 Length = 596 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 KRLSFV 7 KRLSFV Sbjct: 84 KRLSFV 89>NP_001139406 Length = 540 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 KRLSFV 7 KRLSFV Sbjct: 28 KRLSFV 33>NP_001139405 Length = 590 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 KRLSFV 7 KRLSFV Sbjct: 78 KRLSFV 83>NP_001138762 Length = 501 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 LSFVVP 9 LSF+VP Sbjct: 209 LSFIVP 214>NP_938018 Length = 505 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 LSFVVP 9 LSF+VP Sbjct: 209 LSFIVP 214>NP_001129477 Length = 1010 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 EKRLSFVV 8 EK++ FVV Sbjct: 64 EKKIEFVV 71>NP_001005853 Length = 312 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 EKRLSFV 7 +KR+SFV Sbjct: 89 QKRISFV 95>NP_001129478 Length = 1010 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 EKRLSFVV 8 EK++ FVV Sbjct: 64 EKKIEFVV 71>NP_443163 Length = 331 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 EKRLSFVVP 9 E L+F+VP Sbjct: 59 ETSLAFIVP 67>NP_001171643 Length = 332 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 EKRLSFVVP 9 E L+F+VP Sbjct: 59 ETSLAFIVP 67>NP_000810 Length = 1010 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 EKRLSFVV 8 EK++ FVV Sbjct: 64 EKKIEFVV 71>NP_009212 Length = 98 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 RLSFVVP 9 ++SFV+P Sbjct: 88 KISFVIP 94>XP_006724053 Length = 1010 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 EKRLSFVV 8 EK++ FVV Sbjct: 64 EKKIEFVV 71>XP_006724052 Length = 1010 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 EKRLSFVV 8 EK++ FVV Sbjct: 64 EKKIEFVV 71>XP_005260998 Length = 1010 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 EKRLSFVV 8 EK++ FVV Sbjct: 64 EKKIEFVV 71>XP_006724051 Length = 1026 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 EKRLSFVV 8 EK++ FVV Sbjct: 80 EKKIEFVV 87>XP_005254260 Length = 370 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 LSFVVP 9 LSF+VP Sbjct: 336 LSFIVP 341>XP_005254259 Length = 456 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 LSFVVP 9 LSF+VP Sbjct: 422 LSFIVP 427>XP_006714138 Length = 154 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 RLSFVVP 9 ++SFV+P Sbjct: 144 KISFVIP 150>XP_005247061 Length = 312 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 EKRLSFV 7 +KR+SFV Sbjct: 89 QKRISFV 95>NP_780294 Length = 433 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 EKRLSFVV 8 EK++ FVV Sbjct: 64 EKKIEFVV 71>NP_775486 Length = 331 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 EKRLSFV 7 +KR+SFV Sbjct: 89 QKRISFV 95Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.325 0.142 0.394 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 511,037 Number of extensions: 905 Number of successful extensions: 61 Number of sequences better than 10000.0: 61 Number of HSP's gapped: 61 Number of HSP's successfully gapped: 61 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.0 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |