Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_037536 17 4312 NP_005814 17 4312 NP_001170826 17 4312 XP_005255091 17 4312 XP_006720900 17 4312 XP_006720899 17 4312 NP_001018048 16 7355 NP_056001 16 7355 NP_001018047 16 7355 NP_150648 16 7355 NP_001258593 16 7355 NP_001107867 16 7355 NP_060208 16 7355 NP_001001413 16 7355 XP_006726624 16 7355 XP_006726623 16 7355 XP_006725630 16 7355 XP_006725629 16 7355 XP_006725599 16 7355 XP_006726291 16 7355 XP_006726290 16 7355 XP_006725238 16 7355 XP_006720863 16 7355 XP_006720862 16 7355 XP_006720860 16 7355 XP_006720859 16 7355 XP_006720858 16 7355 XP_006720426 16 7355 XP_006716856 16 7355 XP_005251549 16 7355 NP_065433 15 9605 NP_003365 15 9605 NP_003611 15 9605 NP_001002759 15 9605 NP_660290 15 9605 NP_055635 15 9605 NP_075463 15 9605 NP_775871 15 9605 XP_006725236 15 9605 XP_006720423 15 9605 XP_006719812 15 9605 XP_005269581 15 9605 XP_005269579 15 9605 XP_005269578 15 9605 XP_005272132 15 9605 XP_006710043 15 9605 NP_001003 15 9605>NP_037536 Length = 630 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 EKNAKLST 8 +KN KLST Sbjct: 91 QKNVKLST 98>NP_005814 Length = 622 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 EKNAKLST 8 +KN KLST Sbjct: 91 QKNVKLST 98>NP_001170826 Length = 622 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 EKNAKLST 8 +KN KLST Sbjct: 91 QKNVKLST 98>XP_005255091 Length = 621 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 EKNAKLST 8 +KN KLST Sbjct: 90 QKNVKLST 97>XP_006720900 Length = 622 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 EKNAKLST 8 +KN KLST Sbjct: 91 QKNVKLST 98>XP_006720899 Length = 622 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 EKNAKLST 8 +KN KLST Sbjct: 91 QKNVKLST 98>NP_001018048 Length = 3069 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 EKNAKLSTT 9 EK+A +STT Sbjct: 1019 EKSAPVSTT 1027>NP_056001 Length = 3095 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 EKNAKLSTT 9 EK+A +STT Sbjct: 1019 EKSAPVSTT 1027>NP_001018047 Length = 3135 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 EKNAKLSTT 9 EK+A +STT Sbjct: 1019 EKSAPVSTT 1027>NP_150648 Length = 3174 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 EKNAKLSTT 9 EK+A +STT Sbjct: 1019 EKSAPVSTT 1027>NP_001258593 Length = 670 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 EKNAKL 6 EKNAKL Sbjct: 209 EKNAKL 214>NP_001107867 Length = 391 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 EKNAKLST 8 E+N KLST Sbjct: 245 EENKKLST 252>NP_060208 Length = 1406 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 EKNAKLST 8 E+N KLST Sbjct: 245 EENKKLST 252>NP_001001413 Length = 668 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 EKNAKL 6 EKNAKL Sbjct: 221 EKNAKL 226>XP_006726624 Length = 564 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 EKNAKL 6 EKNAKL Sbjct: 203 EKNAKL 208>XP_006726623 Length = 564 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 EKNAKL 6 EKNAKL Sbjct: 203 EKNAKL 208>XP_006725630 Length = 564 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 EKNAKL 6 EKNAKL Sbjct: 203 EKNAKL 208>XP_006725629 Length = 564 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 EKNAKL 6 EKNAKL Sbjct: 203 EKNAKL 208>XP_006725599 Length = 466 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 EKNAKL 6 EKNAKL Sbjct: 221 EKNAKL 226>XP_006726291 Length = 624 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 EKNAKL 6 EKNAKL Sbjct: 203 EKNAKL 208>XP_006726290 Length = 564 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 EKNAKL 6 EKNAKL Sbjct: 203 EKNAKL 208>XP_006725238 Length = 466 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 EKNAKL 6 EKNAKL Sbjct: 221 EKNAKL 226>XP_006720863 Length = 564 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 EKNAKL 6 EKNAKL Sbjct: 203 EKNAKL 208>XP_006720862 Length = 570 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 EKNAKL 6 EKNAKL Sbjct: 209 EKNAKL 214>XP_006720860 Length = 434 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 EKNAKL 6 EKNAKL Sbjct: 197 EKNAKL 202>XP_006720859 Length = 603 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 EKNAKL 6 EKNAKL Sbjct: 197 EKNAKL 202>XP_006720858 Length = 651 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 EKNAKL 6 EKNAKL Sbjct: 197 EKNAKL 202>XP_006720426 Length = 466 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 EKNAKL 6 EKNAKL Sbjct: 221 EKNAKL 226>XP_006716856 Length = 1343 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 EKNAKLST 8 E+N KLST Sbjct: 182 EENKKLST 189>XP_005251549 Length = 1405 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 EKNAKLST 8 E+N KLST Sbjct: 245 EENKKLST 252>NP_065433 Length = 1091 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KNAKLSTT 9 +N K+STT Sbjct: 519 ENGKISTT 526>NP_003365 Length = 283 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 EKNAKLST 8 +KNAK+ T Sbjct: 109 KKNAKIKT 116>NP_003611 Length = 605 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 EKNAKLST 8 +KN K+ST Sbjct: 510 QKNLKMST 517>NP_001002759 Length = 245 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 EKNAKLSTT 9 E+N KLS T Sbjct: 212 EENKKLSLT 220>NP_660290 Length = 232 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 EKNAKLSTT 9 E+N KLS T Sbjct: 199 EENKKLSLT 207>NP_055635 Length = 608 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 EKNAKLST 8 EKN LST Sbjct: 147 EKNVDLST 154>NP_075463 Length = 3013 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 EKNAKLS 7 EKN KLS Sbjct: 2177 EKNPKLS 2183>NP_775871 Length = 8384 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 EKNAKLSTT 9 +KN KLS T Sbjct: 587 DKNNKLSLT 595>XP_006725236 Length = 208 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 EKNAKLST 8 +KNAK+S+ Sbjct: 153 KKNAKISS 160>XP_006720423 Length = 208 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 EKNAKLST 8 +KNAK+S+ Sbjct: 153 KKNAKISS 160>XP_006719812 Length = 3019 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 EKNAKLS 7 EKN KLS Sbjct: 2174 EKNPKLS 2180>XP_005269581 Length = 232 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 EKNAKLSTT 9 E+N KLS T Sbjct: 199 EENKKLSLT 207>XP_005269579 Length = 254 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 EKNAKLSTT 9 E+N KLS T Sbjct: 221 EENKKLSLT 229>XP_005269578 Length = 307 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 EKNAKLSTT 9 E+N KLS T Sbjct: 274 EENKKLSLT 282>XP_005272132 Length = 283 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 EKNAKLST 8 +KNAK+ T Sbjct: 109 KKNAKIKT 116>XP_006710043 Length = 208 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 EKNAKLST 8 +KNAK+S+ Sbjct: 153 KKNAKISS 160>NP_001003 Length = 208 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 EKNAKLST 8 +KNAK+S+ Sbjct: 153 KKNAKISS 160Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.282 0.0978 0.220 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 347,005 Number of extensions: 397 Number of successful extensions: 47 Number of sequences better than 10000.0: 47 Number of HSP's gapped: 47 Number of HSP's successfully gapped: 47 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 18 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (14.7 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |